RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 A0A1B0GUV1 79 aa10.2□□□□□ -0.78
CDK5RAP3-218ENST00000580391 TMEM238LA0A1B0GVL6 79 aa10.2□□□□□ -0.78
CDK5RAP3-218ENST00000580391 H3BNG1 76 aa10.2□□□□□ -0.78
CDK5RAP3-218ENST00000580391 SEC11AP67812 179 aa10.2□□□□□ -0.78
CDK5RAP3-218ENST00000580391 LELP1Q5T871 98 aa10.2□□□□□ -0.78
CDK5RAP3-218ENST00000580391 CLPSL2Q6UWE3 100 aa10.19□□□□□ -0.78
CDK5RAP3-218ENST00000580391 H3BRM9 83 aa10.19□□□□□ -0.78
CDK5RAP3-218ENST00000580391 COL5A1-AS1Q5SY13 56 aa10.19□□□□□ -0.78
CDK5RAP3-218ENST00000580391 SCGB1D4Q6XE38 83 aa10.19□□□□□ -0.78
CDK5RAP3-218ENST00000580391 LYPD5Q6UWN5 251 aa10.18□□□□□ -0.78
CDK5RAP3-218ENST00000580391 LINC00959A0A1B0GUT2 108 aa10.17□□□□□ -0.78
CDK5RAP3-218ENST00000580391 SMIM1B2RUZ4 78 aa10.17□□□□□ -0.78
CDK5RAP3-218ENST00000580391 GCSHP23434 173 aa10.16□□□□□ -0.78
CDK5RAP3-218ENST00000580391 ORAOV1Q8WV07 137 aa10.16□□□□□ -0.78
CDK5RAP3-218ENST00000580391 STAB2Q8WWQ8 2551 aa10.16□□□□□ -0.78
CDK5RAP3-218ENST00000580391 K7EP13 123 aa10.15□□□□□ -0.78
CDK5RAP3-218ENST00000580391 FXYD2P54710 66 aa10.15□□□□□ -0.78
CDK5RAP3-218ENST00000580391 C10orf126Q8N4M7 172 aa10.15□□□□□ -0.78
CDK5RAP3-218ENST00000580391 TRAV10A0A0B4J240 114 aa10.15□□□□□ -0.78
CDK5RAP3-218ENST00000580391 IGLV5-39A0A0G2JS06 123 aa10.15□□□□□ -0.78
CDK5RAP3-218ENST00000580391 ANGP03950 147 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-218ENST00000580391 LINC00269Q8N2A0 174 aa10.15□□□□□ -0.78
CDK5RAP3-218ENST00000580391 CEND1Q8N111 149 aa10.14□□□□□ -0.79
CDK5RAP3-218ENST00000580391 HIST1H4GQ99525 98 aa10.14□□□□□ -0.79
CDK5RAP3-218ENST00000580391 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
CDK5RAP3-218ENST00000580391 ZFAND6Q6FIF0 208 aa10.14□□□□□ -0.79
CDK5RAP3-218ENST00000580391 Q6ZVH6 145 aa10.14□□□□□ -0.79
CDK5RAP3-218ENST00000580391 B9D2Q9BPU9 175 aa10.14□□□□□ -0.79
CDK5RAP3-218ENST00000580391 IGHV3OR16-9A0A0B4J2B5 98 aa10.13□□□□□ -0.79
CDK5RAP3-218ENST00000580391 TAL2Q16559 108 aa10.13□□□□□ -0.79
CDK5RAP3-218ENST00000580391 WFDC10BQ8IUB3 73 aa10.13□□□□□ -0.79
CDK5RAP3-218ENST00000580391 PRKDCP78527 4128 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-218ENST00000580391 A0A0J9YXY3 114 aa10.12□□□□□ -0.79
CDK5RAP3-218ENST00000580391 CCL25O15444 150 aa10.12□□□□□ -0.79
CDK5RAP3-218ENST00000580391 XCL1P47992 114 aa10.12□□□□□ -0.79
CDK5RAP3-218ENST00000580391 REG3AQ06141 175 aa10.12□□□□□ -0.79
CDK5RAP3-218ENST00000580391 SS18Q15532 418 aa10.12□□□□□ -0.79
CDK5RAP3-218ENST00000580391 ESRGQ1W209 222 aa10.12□□□□□ -0.79
CDK5RAP3-218ENST00000580391 TM2D2Q9BX73 214 aa10.12□□□□□ -0.79
CDK5RAP3-218ENST00000580391 C5orf38Q86SI9 138 aa10.11□□□□□ -0.79
CDK5RAP3-218ENST00000580391 IGHV3-30P01768 117 aa10.1□□□□□ -0.79
CDK5RAP3-218ENST00000580391 IGHV3-33P01772 117 aa10.1□□□□□ -0.79
CDK5RAP3-218ENST00000580391 IGHV3-30-5P0DP03 117 aa10.1□□□□□ -0.79
CDK5RAP3-218ENST00000580391 SPANXB1Q9NS25 103 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-218ENST00000580391 IGLV10-54A0A075B6I4 117 aa10.1□□□□□ -0.79
CDK5RAP3-218ENST00000580391 TAX1BP3O14907 124 aa10.1□□□□□ -0.79
CDK5RAP3-218ENST00000580391 SRSF9Q13242 221 aaKnown RBP eCLIP10.1□□□□□ -0.792e-12■■□□□ 12.4
CDK5RAP3-218ENST00000580391 A0A087WZ39 114 aa10.09□□□□□ -0.79
CDK5RAP3-218ENST00000580391 NDUFA1O15239 70 aa10.09□□□□□ -0.79
CDK5RAP3-218ENST00000580391 PTTG1IPP53801 180 aa10.09□□□□□ -0.79
CDK5RAP3-218ENST00000580391 KLK12Q9UKR0 248 aa10.09□□□□□ -0.79
CDK5RAP3-218ENST00000580391 A6NDN8 102 aa10.08□□□□□ -0.8
CDK5RAP3-218ENST00000580391 Q9H8V8 135 aa10.08□□□□□ -0.8
CDK5RAP3-218ENST00000580391 CHCHD10Q8WYQ3 142 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-218ENST00000580391 LITAFQ99732 161 aa10.08□□□□□ -0.8
CDK5RAP3-218ENST00000580391 NHP2Q9NX24 153 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP3-218ENST00000580391 K7ERJ3 54 aa10.07□□□□□ -0.8
CDK5RAP3-218ENST00000580391 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
CDK5RAP3-218ENST00000580391 TOMM7Q9P0U1 55 aa10.07□□□□□ -0.8
CDK5RAP3-218ENST00000580391 TMEM238C9JI98 176 aa10.06□□□□□ -0.8
CDK5RAP3-218ENST00000580391 COX7B2Q8TF08 81 aa10.06□□□□□ -0.8
CDK5RAP3-218ENST00000580391 ZNF625Q96I27 306 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-218ENST00000580391 PRR34Q9NV39 138 aa10.06□□□□□ -0.8
CDK5RAP3-218ENST00000580391 MEGF8Q7Z7M0 2845 aa10.06□□□□□ -0.8
CDK5RAP3-218ENST00000580391 DYNC2H1Q8NCM8 4307 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-218ENST00000580391 CD164L2Q6UWJ8 174 aa10.05□□□□□ -0.8
CDK5RAP3-218ENST00000580391 ENHOQ6UWT2 76 aa10.05□□□□□ -0.8
CDK5RAP3-218ENST00000580391 COX11Q9Y6N1 276 aa10.05□□□□□ -0.8
CDK5RAP3-218ENST00000580391 IGLL5B9A064 214 aa10.05□□□□□ -0.8
CDK5RAP3-218ENST00000580391 ADAMTSL4-AS1Q5T5F5 129 aa10.05□□□□□ -0.8
CDK5RAP3-218ENST00000580391 RAB37Q96AX2 223 aa10.05□□□□□ -0.8
CDK5RAP3-218ENST00000580391 UBE2WQ96B02 151 aa10.04□□□□□ -0.8
CDK5RAP3-218ENST00000580391 CRPP02741 224 aa10.03□□□□□ -0.8
CDK5RAP3-218ENST00000580391 FOXI1Q12951 378 aa10.03□□□□□ -0.8
CDK5RAP3-218ENST00000580391 COX7A2LO14548 114 aa10.03□□□□□ -0.8
CDK5RAP3-218ENST00000580391 GAGE12HA6NDE8 117 aa10.02□□□□□ -0.81
CDK5RAP3-218ENST00000580391 SMIM13P0DJ93 91 aa10.02□□□□□ -0.81
CDK5RAP3-218ENST00000580391 DAND5Q8N907 189 aa10.02□□□□□ -0.81
CDK5RAP3-218ENST00000580391 NAA38Q9BRA0 125 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-218ENST00000580391 SPANXDQ9BXN6 97 aa10.02□□□□□ -0.81
CDK5RAP3-218ENST00000580391 SPANXCQ9NY87 97 aa10.02□□□□□ -0.81
CDK5RAP3-218ENST00000580391 LINC00588Q9Y4M8 146 aa10.02□□□□□ -0.81
CDK5RAP3-218ENST00000580391 A0A0U1RRA0 63 aa10.01□□□□□ -0.81
CDK5RAP3-218ENST00000580391 MIAQ16674 131 aa10.01□□□□□ -0.81
CDK5RAP3-218ENST00000580391 LINC01556Q5JQF7 62 aa10.01□□□□□ -0.81
CDK5RAP3-218ENST00000580391 MUSTN1Q8IVN3 82 aa10.01□□□□□ -0.81
CDK5RAP3-218ENST00000580391 A0A1B0GWB2 263 aa10.01□□□□□ -0.81
CDK5RAP3-218ENST00000580391 A6NJY4 79 aa10.01□□□□□ -0.81
CDK5RAP3-218ENST00000580391 TIMM17BO60830 172 aa10.01□□□□□ -0.81
CDK5RAP3-218ENST00000580391 NPC2P61916 151 aa10.01□□□□□ -0.81
CDK5RAP3-218ENST00000580391 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
CDK5RAP3-218ENST00000580391 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
CDK5RAP3-218ENST00000580391 HERV-K104P63124 156 aa10□□□□□ -0.81
CDK5RAP3-218ENST00000580391 PLECQ15149 4684 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-218ENST00000580391 DNAH1Q9P2D7 4330 aa10□□□□□ -0.81
CDK5RAP3-218ENST00000580391 CSMD3Q7Z407 3707 aa9.99□□□□□ -0.81
CDK5RAP3-218ENST00000580391 LYSTQ99698 3801 aa9.99□□□□□ -0.81
CDK5RAP3-218ENST00000580391 A4D1N5 150 aa9.99□□□□□ -0.81
CDK5RAP3-218ENST00000580391 C9orf118A6NHY6 69 aa9.99□□□□□ -0.81
CDK5RAP3-218ENST00000580391 APOMO95445 188 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms