RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 CARHSP1Q9Y2V2 147 aaKnown RBP6.98□□□□□ -1.29
NDEL1-208ENST00000580237 PRSS47A8MTI9 375 aa6.97□□□□□ -1.29
NDEL1-208ENST00000580237 K7EMI3 77 aa6.97□□□□□ -1.29
NDEL1-208ENST00000580237 SPAG11BQ08648 103 aa6.97□□□□□ -1.29
NDEL1-208ENST00000580237 MAJINQ3KP22 176 aa6.97□□□□□ -1.29
NDEL1-208ENST00000580237 COX19Q49B96 90 aa6.97□□□□□ -1.29
NDEL1-208ENST00000580237 SPACA4Q8TDM5 124 aa6.97□□□□□ -1.29
NDEL1-208ENST00000580237 CAMK2N2Q96S95 79 aa6.97□□□□□ -1.29
NDEL1-208ENST00000580237 IGLV4-69A0A075B6H9 119 aa6.96□□□□□ -1.3
NDEL1-208ENST00000580237 IGLV4-3A0A075B6K6 122 aa6.96□□□□□ -1.3
NDEL1-208ENST00000580237 APOC3P02656 99 aa6.96□□□□□ -1.3
NDEL1-208ENST00000580237 MT-ND6P03923 174 aa6.96□□□□□ -1.3
NDEL1-208ENST00000580237 G0S2P27469 103 aa6.96□□□□□ -1.3
NDEL1-208ENST00000580237 CIRBPQ14011 172 aaKnown RBP6.96□□□□□ -1.3
NDEL1-208ENST00000580237 C10orf91Q5T1B1 145 aa6.96□□□□□ -1.3
NDEL1-208ENST00000580237 PRSS3P2Q8NHM4 247 aa6.96□□□□□ -1.3
NDEL1-208ENST00000580237 ORAOV1Q8WV07 137 aa6.96□□□□□ -1.3
NDEL1-208ENST00000580237 GNB1LQ9BYB4 327 aa6.96□□□□□ -1.3
NDEL1-208ENST00000580237 PYGO1Q9Y3Y4 419 aa6.96□□□□□ -1.3
NDEL1-208ENST00000580237 A0A087WYN8 130 aa6.95□□□□□ -1.3
NDEL1-208ENST00000580237 A0A096LNI7 61 aa6.95□□□□□ -1.3
NDEL1-208ENST00000580237 OR10D4PQ8NGN7 298 aa6.95□□□□□ -1.3
NDEL1-208ENST00000580237 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
NDEL1-208ENST00000580237 DMBT1Q9UGM3 2413 aaPredicted RBP6.94□□□□□ -1.3
NDEL1-208ENST00000580237 SNAPINO95295 136 aa6.94□□□□□ -1.3
NDEL1-208ENST00000580237 FABP9Q0Z7S8 132 aa6.94□□□□□ -1.3
NDEL1-208ENST00000580237 PAPPA-AS1Q5QFB9 102 aa6.94□□□□□ -1.3
NDEL1-208ENST00000580237 Q6ZRU5 148 aa6.94□□□□□ -1.3
NDEL1-208ENST00000580237 SVBPQ8N300 66 aa6.94□□□□□ -1.3
NDEL1-208ENST00000580237 C7orf33Q8WU49 177 aa6.94□□□□□ -1.3
NDEL1-208ENST00000580237 FAM104AQ969W3 186 aa6.94□□□□□ -1.3
NDEL1-208ENST00000580237 MRPL18Q9H0U6 180 aaKnown RBP6.94□□□□□ -1.3
NDEL1-208ENST00000580237 VCX2Q9H322 139 aa6.94□□□□□ -1.3
NDEL1-208ENST00000580237 SMCO4Q9NRQ5 59 aa6.94□□□□□ -1.3
NDEL1-208ENST00000580237 IGHV3OR16-9A0A0B4J2B5 98 aa6.93□□□□□ -1.3
NDEL1-208ENST00000580237 LOC107984640A0A0U1RRK4 108 aa6.93□□□□□ -1.3
NDEL1-208ENST00000580237 RPL18AQ02543 176 aaKnown RBP6.93□□□□□ -1.3
NDEL1-208ENST00000580237 FA2HQ7L5A8 372 aa6.93□□□□□ -1.3
NDEL1-208ENST00000580237 STPG4Q8N801 248 aa6.93□□□□□ -1.3
NDEL1-208ENST00000580237 C2orf48Q96LS8 159 aa6.93□□□□□ -1.3
NDEL1-208ENST00000580237 J3QL48 77 aa6.92□□□□□ -1.3
NDEL1-208ENST00000580237 NDUFA1O15239 70 aa6.92□□□□□ -1.3
NDEL1-208ENST00000580237 NPSP0C0P6 89 aa6.92□□□□□ -1.3
NDEL1-208ENST00000580237 GAGE2BQ13066 116 aa6.92□□□□□ -1.3
NDEL1-208ENST00000580237 LINC00242Q5T6M2 205 aa6.92□□□□□ -1.3
NDEL1-208ENST00000580237 ALKBH7Q9BT30 221 aaPredicted RBP6.92□□□□□ -1.3
NDEL1-208ENST00000580237 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
NDEL1-208ENST00000580237 SRRM2Q9UQ35 2752 aaKnown RBP6.91□□□□□ -1.3
NDEL1-208ENST00000580237 UBE2D1P51668 147 aa6.91□□□□□ -1.3
NDEL1-208ENST00000580237 ZC2HC1BQ5TFG8 222 aa6.91□□□□□ -1.3
NDEL1-208ENST00000580237 TOMM6Q96B49 74 aa6.91□□□□□ -1.3
NDEL1-208ENST00000580237 SCGB3A1Q96QR1 104 aa6.91□□□□□ -1.3
NDEL1-208ENST00000580237 TIMM17AQ99595 171 aa6.91□□□□□ -1.3
NDEL1-208ENST00000580237 TRAPPC1Q9Y5R8 145 aa6.91□□□□□ -1.3
NDEL1-208ENST00000580237 FAT1Q14517 4588 aa6.91□□□□□ -1.3
NDEL1-208ENST00000580237 A0A087WZ39 114 aa6.9□□□□□ -1.3
NDEL1-208ENST00000580237 LINC01549A6NIU2 74 aa6.9□□□□□ -1.3
NDEL1-208ENST00000580237 IGIPA6NJ69 53 aa6.9□□□□□ -1.3
NDEL1-208ENST00000580237 PRSS2P07478 247 aa6.9□□□□□ -1.3
NDEL1-208ENST00000580237 PTTG1IPP53801 180 aa6.9□□□□□ -1.3
NDEL1-208ENST00000580237 SEC11AP67812 179 aa6.9□□□□□ -1.3
NDEL1-208ENST00000580237 LINC00173Q6ZV60 143 aa6.9□□□□□ -1.3
NDEL1-208ENST00000580237 PACRGQ96M98 296 aaPredicted RBP6.9□□□□□ -1.3
NDEL1-208ENST00000580237 GEMIN7Q9H840 131 aaKnown RBP6.9□□□□□ -1.3
NDEL1-208ENST00000580237 F8WDY8 70 aa6.89□□□□□ -1.31
NDEL1-208ENST00000580237 HERVK_113P63121 156 aa6.89□□□□□ -1.31
NDEL1-208ENST00000580237 ERASQ7Z444 233 aa6.89□□□□□ -1.31
NDEL1-208ENST00000580237 AMELXQ99217 191 aa6.89□□□□□ -1.31
NDEL1-208ENST00000580237 MRPL35Q9NZE8 188 aaKnown RBP6.89□□□□□ -1.31
NDEL1-208ENST00000580237 TOMM7Q9P0U1 55 aa6.89□□□□□ -1.31
NDEL1-208ENST00000580237 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
NDEL1-208ENST00000580237 A0A0J9YXV3 536 aa6.88□□□□□ -1.31
NDEL1-208ENST00000580237 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.88□□□□□ -1.31
NDEL1-208ENST00000580237 KRTAP10-4P60372 401 aaPredicted RBP6.88□□□□□ -1.31
NDEL1-208ENST00000580237 RNF151Q2KHN1 245 aa6.87□□□□□ -1.31
NDEL1-208ENST00000580237 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
NDEL1-208ENST00000580237 CKS1BP61024 79 aa6.86□□□□□ -1.31
NDEL1-208ENST00000580237 UNQ6190/PRO20217Q6UXQ8 127 aa6.86□□□□□ -1.31
NDEL1-208ENST00000580237 LINC01561Q8N1V8 128 aa6.86□□□□□ -1.31
NDEL1-208ENST00000580237 C6orf48Q9UBA6 75 aa6.86□□□□□ -1.31
NDEL1-208ENST00000580237 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
NDEL1-208ENST00000580237 TRBV30A0A0K0K1B3 111 aa6.85□□□□□ -1.31
NDEL1-208ENST00000580237 LINC01546A6NGU7 62 aa6.85□□□□□ -1.31
NDEL1-208ENST00000580237 PRR3P79522 188 aaKnown RBP6.85□□□□□ -1.31
NDEL1-208ENST00000580237 C10orf25Q5T742 122 aa6.85□□□□□ -1.31
NDEL1-208ENST00000580237 C2orf82Q6UX34 121 aa6.85□□□□□ -1.31
NDEL1-208ENST00000580237 C18orf32Q8TCD1 76 aa6.85□□□□□ -1.31
NDEL1-208ENST00000580237 CDKN2A-AS1Q9UH64 79 aa6.85□□□□□ -1.31
NDEL1-208ENST00000580237 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.31
NDEL1-208ENST00000580237 HBDP02042 147 aa6.84□□□□□ -1.31
NDEL1-208ENST00000580237 HNRNPA3P51991 378 aaKnown RBP6.84□□□□□ -1.31
NDEL1-208ENST00000580237 NDUFA6P56556 154 aa6.84□□□□□ -1.31
NDEL1-208ENST00000580237 RAB5BP61020 215 aa6.84□□□□□ -1.31
NDEL1-208ENST00000580237 PMVKQ15126 192 aa6.84□□□□□ -1.31
NDEL1-208ENST00000580237 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
NDEL1-208ENST00000580237 C9orf116Q5BN46 136 aaPredicted RBP6.84□□□□□ -1.31
NDEL1-208ENST00000580237 FAM19A3Q7Z5A8 133 aa6.84□□□□□ -1.31
NDEL1-208ENST00000580237 Q8IZM0 81 aa6.84□□□□□ -1.31
NDEL1-208ENST00000580237 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
NDEL1-208ENST00000580237 KIAA0087Q14695 138 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms