RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 ATP6V1G1O75348 118 aa14.04□□□□□ -0.16
TSEN54-207ENST00000580013 CNBPP62633 177 aaKnown RBP14.04□□□□□ -0.16
TSEN54-207ENST00000580013 Q6ZN92 141 aa14.04□□□□□ -0.16
TSEN54-207ENST00000580013 HSPG2P98160 4391 aa14.04□□□□□ -0.16
TSEN54-207ENST00000580013 IGHV1-58A0A0C4DH39 117 aa14.03□□□□□ -0.16
TSEN54-207ENST00000580013 COX7A2LO14548 114 aa14.03□□□□□ -0.16
TSEN54-207ENST00000580013 PMCHL1Q16048 86 aa14.03□□□□□ -0.16
TSEN54-207ENST00000580013 PAPPA-AS1Q5QFB9 102 aa14.03□□□□□ -0.16
TSEN54-207ENST00000580013 C5orf38Q86SI9 138 aa14.03□□□□□ -0.16
TSEN54-207ENST00000580013 hDV102S1A0JD36 115 aa14.02□□□□□ -0.17
TSEN54-207ENST00000580013 LINC00310P59036 64 aa14.02□□□□□ -0.17
TSEN54-207ENST00000580013 HERC2O95714 4834 aa14.01□□□□□ -0.17
TSEN54-207ENST00000580013 HBDP02042 147 aa14.01□□□□□ -0.17
TSEN54-207ENST00000580013 C2orf88Q9BSF0 95 aa14.01□□□□□ -0.17
TSEN54-207ENST00000580013 LINC01620Q4KN68 170 aa14□□□□□ -0.17
TSEN54-207ENST00000580013 C9orf163Q8N9P6 203 aa14□□□□□ -0.17
TSEN54-207ENST00000580013 CST9LQ9H4G1 147 aa14□□□□□ -0.17
TSEN54-207ENST00000580013 CDK2AP2O75956 126 aa13.99□□□□□ -0.17
TSEN54-207ENST00000580013 HIGD2BQ4VC39 106 aa13.99□□□□□ -0.17
TSEN54-207ENST00000580013 BAGE3Q86Y29 109 aa13.99□□□□□ -0.17
TSEN54-207ENST00000580013 A0A087WZ39 114 aa13.98□□□□□ -0.17
TSEN54-207ENST00000580013 FAM30AQ9NZY2 134 aa13.98□□□□□ -0.17
TSEN54-207ENST00000580013 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.97□□□□□ -0.17
TSEN54-207ENST00000580013 NUPR1O60356 82 aa13.97□□□□□ -0.17
TSEN54-207ENST00000580013 XGP55808 180 aa13.97□□□□□ -0.17
TSEN54-207ENST00000580013 PMVKQ15126 192 aa13.97□□□□□ -0.17
TSEN54-207ENST00000580013 LINC01561Q8N1V8 128 aa13.97□□□□□ -0.17
TSEN54-207ENST00000580013 IGHV3-64A0A075B6Q5 118 aa13.96□□□□□ -0.17
TSEN54-207ENST00000580013 MALP21145 153 aa13.96□□□□□ -0.17
TSEN54-207ENST00000580013 Q6ZSA8 131 aa13.96□□□□□ -0.17
TSEN54-207ENST00000580013 A0A0J9YXV3 536 aa13.95□□□□□ -0.18
TSEN54-207ENST00000580013 SERF1AO75920 110 aa13.95□□□□□ -0.18
TSEN54-207ENST00000580013 SDIM1Q6ZPB5 146 aa13.95□□□□□ -0.18
TSEN54-207ENST00000580013 LINC00526Q96FQ7 95 aa13.95□□□□□ -0.18
TSEN54-207ENST00000580013 HIST1H2BKO60814 126 aa13.94□□□□□ -0.18
TSEN54-207ENST00000580013 HIST1H2BJP06899 126 aa13.94□□□□□ -0.18
TSEN54-207ENST00000580013 HIST1H2BOP23527 126 aa13.94□□□□□ -0.18
TSEN54-207ENST00000580013 HIST1H2BBP33778 126 aa13.94□□□□□ -0.18
TSEN54-207ENST00000580013 HIST1H2BDP58876 126 aa13.94□□□□□ -0.18
TSEN54-207ENST00000580013 HIST1H2BCP62807 126 aa13.94□□□□□ -0.18
TSEN54-207ENST00000580013 HIST2H2BEQ16778 126 aa13.94□□□□□ -0.18
TSEN54-207ENST00000580013 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.94□□□□□ -0.18
TSEN54-207ENST00000580013 HIST1H2BHQ93079 126 aa13.94□□□□□ -0.18
TSEN54-207ENST00000580013 HIST1H2BNQ99877 126 aa13.94□□□□□ -0.18
TSEN54-207ENST00000580013 HIST1H2BMQ99879 126 aa13.94□□□□□ -0.18
TSEN54-207ENST00000580013 TINCRA0A1B0GVN0 87 aa13.93□□□□□ -0.18
TSEN54-207ENST00000580013 ATP5LO75964 103 aa13.93□□□□□ -0.18
TSEN54-207ENST00000580013 APOMO95445 188 aa13.93□□□□□ -0.18
TSEN54-207ENST00000580013 SEC11AP67812 179 aa13.93□□□□□ -0.18
TSEN54-207ENST00000580013 FAM19A2Q8N3H0 131 aa13.93□□□□□ -0.18
TSEN54-207ENST00000580013 IGLV4-69A0A075B6H9 119 aa13.92□□□□□ -0.18
TSEN54-207ENST00000580013 HSBP1O75506 76 aa13.92□□□□□ -0.18
TSEN54-207ENST00000580013 HERVK_113P63121 156 aa13.92□□□□□ -0.18
TSEN54-207ENST00000580013 KIAA0087Q14695 138 aa13.92□□□□□ -0.18
TSEN54-207ENST00000580013 OR10D4PQ8NGN7 298 aa13.92□□□□□ -0.18
TSEN54-207ENST00000580013 KRTAP17-1Q9BYP8 105 aa13.92□□□□□ -0.18
TSEN54-207ENST00000580013 IGLV5-45A0A087WSX0 123 aa13.91□□□□□ -0.18
TSEN54-207ENST00000580013 ZNF561-AS1K7EIQ3 104 aa13.91□□□□□ -0.18
TSEN54-207ENST00000580013 C2orf48Q96LS8 159 aa13.91□□□□□ -0.18
TSEN54-207ENST00000580013 CDKN2A-AS1Q9UH64 79 aa13.91□□□□□ -0.18
TSEN54-207ENST00000580013 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.9□□□□□ -0.18
TSEN54-207ENST00000580013 ORAOV1Q8WV07 137 aa13.89□□□□□ -0.19
TSEN54-207ENST00000580013 IFI27L1Q96BM0 104 aa13.88□□□□□ -0.19
TSEN54-207ENST00000580013 GEMIN7Q9H840 131 aaKnown RBP13.88□□□□□ -0.19
TSEN54-207ENST00000580013 F8WDY8 70 aa13.87□□□□□ -0.19
TSEN54-207ENST00000580013 IGLC3P0DOY3 106 aa13.87□□□□□ -0.19
TSEN54-207ENST00000580013 SPAG11BQ08648 103 aa13.87□□□□□ -0.19
TSEN54-207ENST00000580013 SYCNQ0VAF6 134 aa13.87□□□□□ -0.19
TSEN54-207ENST00000580013 Q6ZRU5 148 aa13.86□□□□□ -0.19
TSEN54-207ENST00000580013 TRAV12-1A0A0B4J245 112 aa13.85□□□□□ -0.19
TSEN54-207ENST00000580013 NDUFA6P56556 154 aa13.85□□□□□ -0.19
TSEN54-207ENST00000580013 CARD19Q96LW7 228 aa13.85□□□□□ -0.19
TSEN54-207ENST00000580013 PANO1I0J062 215 aa13.84□□□□□ -0.19
TSEN54-207ENST00000580013 CIRBPQ14011 172 aaKnown RBP13.84□□□□□ -0.19
TSEN54-207ENST00000580013 COA6Q5JTJ3 125 aaKnown RBP13.84□□□□□ -0.19
TSEN54-207ENST00000580013 RNF151Q2KHN1 245 aa13.83□□□□□ -0.2
TSEN54-207ENST00000580013 C10orf25Q5T742 122 aa13.83□□□□□ -0.2
TSEN54-207ENST00000580013 LINC00469Q8N7U9 141 aa13.83□□□□□ -0.2
TSEN54-207ENST00000580013 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.83□□□□□ -0.2
TSEN54-207ENST00000580013 FAT1Q14517 4588 aa13.83□□□□□ -0.2
TSEN54-207ENST00000580013 LEPROTL1O95214 131 aa13.82□□□□□ -0.2
TSEN54-207ENST00000580013 CAMK2N2Q96S95 79 aa13.82□□□□□ -0.2
TSEN54-207ENST00000580013 CHAC1Q9BUX1 264 aa13.82□□□□□ -0.2
TSEN54-207ENST00000580013 SMIM1B2RUZ4 78 aa13.81□□□□□ -0.2
TSEN54-207ENST00000580013 HAMPP81172 84 aa13.81□□□□□ -0.2
TSEN54-207ENST00000580013 UNQ6190/PRO20217Q6UXQ8 127 aa13.81□□□□□ -0.2
TSEN54-207ENST00000580013 MRPL35Q9NZE8 188 aaKnown RBP13.81□□□□□ -0.2
TSEN54-207ENST00000580013 ZNF22P17026 224 aaPredicted RBP13.8□□□□□ -0.2
TSEN54-207ENST00000580013 CHTOPQ9Y3Y2 248 aaKnown RBP13.8□□□□□ -0.2
TSEN54-207ENST00000580013 C11orf86A6NJI1 115 aa13.79□□□□□ -0.2
TSEN54-207ENST00000580013 Q8IZM0 81 aa13.79□□□□□ -0.2
TSEN54-207ENST00000580013 VPS13BQ7Z7G8 4022 aa13.79□□□□□ -0.2
TSEN54-207ENST00000580013 NDUFA1O15239 70 aa13.78□□□□□ -0.2
TSEN54-207ENST00000580013 SCXQ7RTU7 201 aa13.78□□□□□ -0.2
TSEN54-207ENST00000580013 CIRBP-AS1Q8TBR5 109 aa13.78□□□□□ -0.2
TSEN54-207ENST00000580013 HSPB8Q9UJY1 196 aa13.78□□□□□ -0.2
TSEN54-207ENST00000580013 CHTF8P0CG12 524 aa13.77□□□□□ -0.21
TSEN54-207ENST00000580013 FABP4P15090 132 aa13.77□□□□□ -0.21
TSEN54-207ENST00000580013 C2orf82Q6UX34 121 aa13.77□□□□□ -0.21
TSEN54-207ENST00000580013 C6orf48Q9UBA6 75 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms