RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 C2orf88Q9BSF0 95 aa12.03□□□□□ -0.48
NEK4P2-201ENST00000580004 KRTAP17-1Q9BYP8 105 aa12.03□□□□□ -0.48
NEK4P2-201ENST00000580004 FAM229AH3BQW9 127 aa12.02□□□□□ -0.49
NEK4P2-201ENST00000580004 SCXQ7RTU7 201 aa12.02□□□□□ -0.49
NEK4P2-201ENST00000580004 AMELXQ99217 191 aa12.02□□□□□ -0.49
NEK4P2-201ENST00000580004 FAT1Q14517 4588 aa12.02□□□□□ -0.49
NEK4P2-201ENST00000580004 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
NEK4P2-201ENST00000580004 OR10D4PQ8NGN7 298 aa12.01□□□□□ -0.49
NEK4P2-201ENST00000580004 YPEL4Q96NS1 127 aa12.01□□□□□ -0.49
NEK4P2-201ENST00000580004 VCX2Q9H322 139 aa12.01□□□□□ -0.49
NEK4P2-201ENST00000580004 FA2HQ7L5A8 372 aa12□□□□□ -0.49
NEK4P2-201ENST00000580004 ERASQ7Z444 233 aa12□□□□□ -0.49
NEK4P2-201ENST00000580004 KRTAP4-5Q9BYR2 181 aa12□□□□□ -0.49
NEK4P2-201ENST00000580004 SMCO4Q9NRQ5 59 aa12□□□□□ -0.49
NEK4P2-201ENST00000580004 F8WDY8 70 aa11.99□□□□□ -0.49
NEK4P2-201ENST00000580004 Q5VSD8 79 aa11.99□□□□□ -0.49
NEK4P2-201ENST00000580004 FAM19A3Q7Z5A8 133 aa11.99□□□□□ -0.49
NEK4P2-201ENST00000580004 C5orf38Q86SI9 138 aa11.99□□□□□ -0.49
NEK4P2-201ENST00000580004 CIRBP-AS1Q8TBR5 109 aa11.99□□□□□ -0.49
NEK4P2-201ENST00000580004 C2orf48Q96LS8 159 aa11.99□□□□□ -0.49
NEK4P2-201ENST00000580004 VPS13BQ7Z7G8 4022 aa11.98□□□□□ -0.49
NEK4P2-201ENST00000580004 UBE2D1P51668 147 aa11.98□□□□□ -0.49
NEK4P2-201ENST00000580004 SEC11AP67812 179 aa11.98□□□□□ -0.49
NEK4P2-201ENST00000580004 HAMPP81172 84 aa11.98□□□□□ -0.49
NEK4P2-201ENST00000580004 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
NEK4P2-201ENST00000580004 LINC00173Q6ZV60 143 aa11.98□□□□□ -0.49
NEK4P2-201ENST00000580004 SLC7A5P1Q8MH63 180 aa11.98□□□□□ -0.49
NEK4P2-201ENST00000580004 LINC01561Q8N1V8 128 aa11.98□□□□□ -0.49
NEK4P2-201ENST00000580004 CARD19Q96LW7 228 aa11.98□□□□□ -0.49
NEK4P2-201ENST00000580004 A0A087WZ39 114 aa11.97□□□□□ -0.49
NEK4P2-201ENST00000580004 SMR3BP02814 79 aaPredicted RBP11.97□□□□□ -0.49
NEK4P2-201ENST00000580004 SYCNQ0VAF6 134 aa11.97□□□□□ -0.49
NEK4P2-201ENST00000580004 C18orf32Q8TCD1 76 aa11.97□□□□□ -0.49
NEK4P2-201ENST00000580004 SCGB3A1Q96QR1 104 aa11.96□□□□□ -0.49
NEK4P2-201ENST00000580004 IGLV4-69A0A075B6H9 119 aa11.95□□□□□ -0.5
NEK4P2-201ENST00000580004 RAB5BP61020 215 aa11.95□□□□□ -0.5
NEK4P2-201ENST00000580004 LINC00474Q9P2X8 69 aa11.95□□□□□ -0.5
NEK4P2-201ENST00000580004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.95□□□□□ -0.5
NEK4P2-201ENST00000580004 PLA2G1BP04054 148 aaKnown RBP11.94□□□□□ -0.5
NEK4P2-201ENST00000580004 LINC00614P0C842 121 aa11.94□□□□□ -0.5
NEK4P2-201ENST00000580004 COX6A2Q02221 97 aa11.94□□□□□ -0.5
NEK4P2-201ENST00000580004 SPAG11BQ08648 103 aa11.94□□□□□ -0.5
NEK4P2-201ENST00000580004 SPACA4Q8TDM5 124 aa11.94□□□□□ -0.5
NEK4P2-201ENST00000580004 HERVK_113P63121 156 aa11.93□□□□□ -0.5
NEK4P2-201ENST00000580004 RNF151Q2KHN1 245 aa11.93□□□□□ -0.5
NEK4P2-201ENST00000580004 CBLN2Q8IUK8 224 aa11.93□□□□□ -0.5
NEK4P2-201ENST00000580004 LINC00528Q8N1L1 170 aa11.93□□□□□ -0.5
NEK4P2-201ENST00000580004 ORAOV1Q8WV07 137 aa11.93□□□□□ -0.5
NEK4P2-201ENST00000580004 LINC00526Q96FQ7 95 aa11.93□□□□□ -0.5
NEK4P2-201ENST00000580004 CAMK2N2Q96S95 79 aa11.93□□□□□ -0.5
NEK4P2-201ENST00000580004 SRRM2Q9UQ35 2752 aaKnown RBP11.93□□□□□ -0.5
NEK4P2-201ENST00000580004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.9□□□□□ -0.5
NEK4P2-201ENST00000580004 PANO1I0J062 215 aa11.9□□□□□ -0.5
NEK4P2-201ENST00000580004 Q6ZRU5 148 aa11.9□□□□□ -0.5
NEK4P2-201ENST00000580004 URB1-AS1Q96HZ7 61 aa11.9□□□□□ -0.5
NEK4P2-201ENST00000580004 MRPL35Q9NZE8 188 aaKnown RBP11.9□□□□□ -0.5
NEK4P2-201ENST00000580004 NDUFA1O15239 70 aa11.89□□□□□ -0.51
NEK4P2-201ENST00000580004 HBDP02042 147 aa11.89□□□□□ -0.51
NEK4P2-201ENST00000580004 ZC2HC1BQ5TFG8 222 aa11.89□□□□□ -0.51
NEK4P2-201ENST00000580004 LOC107984640A0A0U1RRK4 108 aa11.88□□□□□ -0.51
NEK4P2-201ENST00000580004 PMVKQ15126 192 aa11.88□□□□□ -0.51
NEK4P2-201ENST00000580004 DPH3Q96FX2 82 aa11.88□□□□□ -0.51
NEK4P2-201ENST00000580004 GEMIN7Q9H840 131 aaKnown RBP11.88□□□□□ -0.51
NEK4P2-201ENST00000580004 PLAC8Q9NZF1 115 aa11.88□□□□□ -0.51
NEK4P2-201ENST00000580004 A0A087WYN8 130 aa11.87□□□□□ -0.51
NEK4P2-201ENST00000580004 A0A096LNJ9 63 aa11.87□□□□□ -0.51
NEK4P2-201ENST00000580004 TINCRA0A1B0GVN0 87 aa11.87□□□□□ -0.51
NEK4P2-201ENST00000580004 CHCHD1Q96BP2 118 aaKnown RBP11.87□□□□□ -0.51
NEK4P2-201ENST00000580004 CST9LQ9H4G1 147 aa11.87□□□□□ -0.51
NEK4P2-201ENST00000580004 A0A096LNI7 61 aa11.86□□□□□ -0.51
NEK4P2-201ENST00000580004 CHTF8P0CG12 524 aa11.86□□□□□ -0.51
NEK4P2-201ENST00000580004 INAFM2P0DMQ5 153 aa11.86□□□□□ -0.51
NEK4P2-201ENST00000580004 KIAA0087Q14695 138 aa11.86□□□□□ -0.51
NEK4P2-201ENST00000580004 MAJINQ3KP22 176 aa11.85□□□□□ -0.51
NEK4P2-201ENST00000580004 IGLV5-45A0A087WSX0 123 aa11.84□□□□□ -0.51
NEK4P2-201ENST00000580004 IGKV2-24A0A0C4DH68 120 aa11.84□□□□□ -0.51
NEK4P2-201ENST00000580004 TRBV30A0A0K0K1B3 111 aa11.84□□□□□ -0.51
NEK4P2-201ENST00000580004 ATP5LO75964 103 aa11.84□□□□□ -0.51
NEK4P2-201ENST00000580004 PTTG1IPP53801 180 aa11.84□□□□□ -0.51
NEK4P2-201ENST00000580004 PDZD11Q5EBL8 140 aa11.84□□□□□ -0.51
NEK4P2-201ENST00000580004 Q8IZM0 81 aa11.84□□□□□ -0.51
NEK4P2-201ENST00000580004 PACRGQ96M98 296 aaPredicted RBP11.84□□□□□ -0.51
NEK4P2-201ENST00000580004 CDKN2A-AS1Q9UH64 79 aa11.84□□□□□ -0.51
NEK4P2-201ENST00000580004 A0A0J9YXV3 536 aa11.83□□□□□ -0.52
NEK4P2-201ENST00000580004 TLX1NBP0CAT3 122 aa11.83□□□□□ -0.52
NEK4P2-201ENST00000580004 TRGC2P03986 189 aa11.82□□□□□ -0.52
NEK4P2-201ENST00000580004 PRSS2P07478 247 aa11.82□□□□□ -0.52
NEK4P2-201ENST00000580004 STPG4Q8N801 248 aa11.82□□□□□ -0.52
NEK4P2-201ENST00000580004 COLCA2A8K830 154 aa11.81□□□□□ -0.52
NEK4P2-201ENST00000580004 LINC00469Q8N7U9 141 aa11.81□□□□□ -0.52
NEK4P2-201ENST00000580004 KRTAP10-4P60372 401 aaPredicted RBP11.8□□□□□ -0.52
NEK4P2-201ENST00000580004 RPL37AP61513 92 aaKnown RBP11.8□□□□□ -0.52
NEK4P2-201ENST00000580004 UNQ6190/PRO20217Q6UXQ8 127 aa11.8□□□□□ -0.52
NEK4P2-201ENST00000580004 H3BRM9 83 aa11.79□□□□□ -0.52
NEK4P2-201ENST00000580004 IGLC3P0DOY3 106 aa11.79□□□□□ -0.52
NEK4P2-201ENST00000580004 CXCL5P42830 114 aa11.79□□□□□ -0.52
NEK4P2-201ENST00000580004 CKS1BP61024 79 aa11.79□□□□□ -0.52
NEK4P2-201ENST00000580004 GAGE2BQ13066 116 aa11.79□□□□□ -0.52
NEK4P2-201ENST00000580004 PMCHL1Q16048 86 aa11.79□□□□□ -0.52
NEK4P2-201ENST00000580004 C6orf226Q5I0X4 101 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms