RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 SYCNQ0VAF6 134 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 MAJINQ3KP22 176 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 PAPPA-AS1Q5QFB9 102 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 C10orf91Q5T1B1 145 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 C2orf66Q6UXQ4 117 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 TEX43Q6ZNM6 134 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 SVBPQ8N300 66 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 TMEM141Q96I45 108 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 CAMK2N2Q96S95 79 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 SMCO4Q9NRQ5 59 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 PKIGQ9Y2B9 76 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 PYGO1Q9Y3Y4 419 aa4.22□□□□□ -1.73
TRAF4-213ENST00000578917 DMBT1Q9UGM3 2413 aaPredicted RBP4.22□□□□□ -1.73
TRAF4-213ENST00000578917 HSPG2P98160 4391 aa4.21□□□□□ -1.74
TRAF4-213ENST00000578917 IGLV4-69A0A075B6H9 119 aa4.21□□□□□ -1.74
TRAF4-213ENST00000578917 FA2HQ7L5A8 372 aa4.21□□□□□ -1.74
TRAF4-213ENST00000578917 CARD19Q96LW7 228 aa4.21□□□□□ -1.74
TRAF4-213ENST00000578917 SCGB3A1Q96QR1 104 aa4.21□□□□□ -1.74
TRAF4-213ENST00000578917 MRPL18Q9H0U6 180 aaKnown RBP4.21□□□□□ -1.74
TRAF4-213ENST00000578917 LINC00474Q9P2X8 69 aa4.21□□□□□ -1.74
TRAF4-213ENST00000578917 TRAPPC1Q9Y5R8 145 aa4.21□□□□□ -1.74
TRAF4-213ENST00000578917 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.21□□□□□ -1.74
TRAF4-213ENST00000578917 APOBP04114 4563 aaKnown RBP4.21□□□□□ -1.74
TRAF4-213ENST00000578917 IGLV4-3A0A075B6K6 122 aa4.2□□□□□ -1.74
TRAF4-213ENST00000578917 CHTF8P0CG12 524 aa4.2□□□□□ -1.74
TRAF4-213ENST00000578917 RPL37AP61513 92 aaKnown RBP4.2□□□□□ -1.74
TRAF4-213ENST00000578917 SPAG11BQ08648 103 aa4.2□□□□□ -1.74
TRAF4-213ENST00000578917 ORAOV1Q8WV07 137 aa4.2□□□□□ -1.74
TRAF4-213ENST00000578917 ALKBH7Q9BT30 221 aaPredicted RBP4.2□□□□□ -1.74
TRAF4-213ENST00000578917 GEMIN7Q9H840 131 aaKnown RBP4.2□□□□□ -1.74
TRAF4-213ENST00000578917 A0A087WYN8 130 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 LOC107984640A0A0U1RRK4 108 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 PANO1I0J062 215 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 PRSS2P07478 247 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 NDUFA6P56556 154 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 SEC11AP67812 179 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 GAGE2BQ13066 116 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 ERASQ7Z444 233 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 STPG4Q8N801 248 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 OR10D4PQ8NGN7 298 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 C7orf33Q8WU49 177 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 C2orf48Q96LS8 159 aa4.19□□□□□ -1.74
TRAF4-213ENST00000578917 FLG2Q5D862 2391 aaPredicted RBP4.19□□□□□ -1.74
TRAF4-213ENST00000578917 IGHV3OR16-9A0A0B4J2B5 98 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 LINC01549A6NIU2 74 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 IGIPA6NJ69 53 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 J3QL48 77 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 NDUFA1O15239 70 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 NPSP0C0P6 89 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 CKS1BP61024 79 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 C6orf226Q5I0X4 101 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 LINC00242Q5T6M2 205 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 ZC2HC1BQ5TFG8 222 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 Q6ZRU5 148 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 SPACA4Q8TDM5 124 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 FAM104AQ969W3 186 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 TOMM6Q96B49 74 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 PACRGQ96M98 296 aaPredicted RBP4.18□□□□□ -1.74
TRAF4-213ENST00000578917 TOMM7Q9P0U1 55 aa4.18□□□□□ -1.74
TRAF4-213ENST00000578917 A0A087WZ39 114 aa4.17□□□□□ -1.74
TRAF4-213ENST00000578917 A0A096LNI7 61 aa4.17□□□□□ -1.74
TRAF4-213ENST00000578917 A0A0J9YXV3 536 aa4.17□□□□□ -1.74
TRAF4-213ENST00000578917 F8WDY8 70 aa4.17□□□□□ -1.74
TRAF4-213ENST00000578917 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.17□□□□□ -1.74
TRAF4-213ENST00000578917 LINC00614P0C842 121 aa4.17□□□□□ -1.74
TRAF4-213ENST00000578917 UBE2D1P51668 147 aa4.17□□□□□ -1.74
TRAF4-213ENST00000578917 RAB5BP61020 215 aa4.17□□□□□ -1.74
TRAF4-213ENST00000578917 HERVK_113P63121 156 aa4.17□□□□□ -1.74
TRAF4-213ENST00000578917 RPL18AQ02543 176 aaKnown RBP4.17□□□□□ -1.74
TRAF4-213ENST00000578917 SLC7A5P1Q8MH63 180 aa4.17□□□□□ -1.74
TRAF4-213ENST00000578917 TIMM17AQ99595 171 aa4.17□□□□□ -1.74
TRAF4-213ENST00000578917 PTTG1IPP53801 180 aa4.16□□□□□ -1.74
TRAF4-213ENST00000578917 CIRBPQ14011 172 aaKnown RBP4.16□□□□□ -1.74
TRAF4-213ENST00000578917 UNQ6190/PRO20217Q6UXQ8 127 aa4.16□□□□□ -1.74
TRAF4-213ENST00000578917 LINC00469Q8N7U9 141 aa4.16□□□□□ -1.74
TRAF4-213ENST00000578917 AMELXQ99217 191 aa4.16□□□□□ -1.74
TRAF4-213ENST00000578917 PLAC8Q9NZF1 115 aa4.16□□□□□ -1.74
TRAF4-213ENST00000578917 FAT1Q14517 4588 aa4.16□□□□□ -1.74
TRAF4-213ENST00000578917 PMVKQ15126 192 aa4.15□□□□□ -1.75
TRAF4-213ENST00000578917 RNF151Q2KHN1 245 aa4.15□□□□□ -1.75
TRAF4-213ENST00000578917 GAGE2EQ4V326 116 aa4.15□□□□□ -1.75
TRAF4-213ENST00000578917 CST9LQ9H4G1 147 aa4.15□□□□□ -1.75
TRAF4-213ENST00000578917 MRPL35Q9NZE8 188 aaKnown RBP4.15□□□□□ -1.75
TRAF4-213ENST00000578917 GAGE2DQ9UEU5 116 aa4.15□□□□□ -1.75
TRAF4-213ENST00000578917 CDKN2A-AS1Q9UH64 79 aa4.15□□□□□ -1.75
TRAF4-213ENST00000578917 LINC01546A6NGU7 62 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 H3BRM9 83 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 HBDP02042 147 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 PMCHL1Q16048 86 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 C10orf25Q5T742 122 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 C2orf82Q6UX34 121 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 LINC00173Q6ZV60 143 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 BAGE3Q86Y29 109 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 CBLN2Q8IUK8 224 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 LINC01561Q8N1V8 128 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 C18orf32Q8TCD1 76 aa4.14□□□□□ -1.75
TRAF4-213ENST00000578917 TRBV30A0A0K0K1B3 111 aa4.13□□□□□ -1.75
TRAF4-213ENST00000578917 TINCRA0A1B0GVN0 87 aa4.13□□□□□ -1.75
TRAF4-213ENST00000578917 ATP5LO75964 103 aa4.13□□□□□ -1.75
TRAF4-213ENST00000578917 C9orf116Q5BN46 136 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms