RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CST9LQ9H4G1 147 aa7.52□□□□□ -1.21
CDK5RAP3-210ENST00000578733 GEMIN7Q9H840 131 aaKnown RBP7.52□□□□□ -1.21
CDK5RAP3-210ENST00000578733 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 COX7A2LO14548 114 aa7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 APOMO95445 188 aa7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 Q6ZRN7 208 aaPredicted RBP7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 LINC00173Q6ZV60 143 aa7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 FAM19A3Q7Z5A8 133 aa7.51□□□□□ -1.21
CDK5RAP3-210ENST00000578733 TINCRA0A1B0GVN0 87 aa7.5□□□□□ -1.21
CDK5RAP3-210ENST00000578733 PRSS29PA6NIE9 313 aa7.5□□□□□ -1.21
CDK5RAP3-210ENST00000578733 RTL8CO15255 209 aa7.5□□□□□ -1.21
CDK5RAP3-210ENST00000578733 CHTOPQ9Y3Y2 248 aaKnown RBP7.5□□□□□ -1.21
CDK5RAP3-210ENST00000578733 H0Y8G0 127 aa7.49□□□□□ -1.21
CDK5RAP3-210ENST00000578733 H3BRM9 83 aa7.49□□□□□ -1.21
CDK5RAP3-210ENST00000578733 FOXI1Q12951 378 aa7.49□□□□□ -1.21
CDK5RAP3-210ENST00000578733 LINC00242Q5T6M2 205 aa7.49□□□□□ -1.21
CDK5RAP3-210ENST00000578733 ZC2HC1BQ5TFG8 222 aa7.49□□□□□ -1.21
CDK5RAP3-210ENST00000578733 IGHV1-58A0A0C4DH39 117 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 F8VRH5 84 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 AKR1D1P51857 326 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 SNRPEP62304 92 aaKnown RBP7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 LINC01561Q8N1V8 128 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 HIST3H2BBQ8N257 126 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 CHAC1Q9BUX1 264 aa7.48□□□□□ -1.21
CDK5RAP3-210ENST00000578733 IGHV3OR16-9A0A0B4J2B5 98 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 A0A0J9YXV3 536 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 C20orf202A1L168 122 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 IGLC3P0DOY3 106 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 KRTAP26-1Q6PEX3 210 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 LINC00469Q8N7U9 141 aa7.47□□□□□ -1.21
CDK5RAP3-210ENST00000578733 FAT2Q9NYQ8 4349 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 A0A087WTM6 91 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 A0A087WZ39 114 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 USP17L23D6RBM5 183 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 SYS1-DBNDD2H3BUS1 97 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PLNP26678 52 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PET117Q6UWS5 81 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 SPATA12Q7Z6I5 190 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 C5orf38Q86SI9 138 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 OR10D4PQ8NGN7 298 aa7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 TMA7Q9Y2S6 64 aaKnown RBP7.46□□□□□ -1.22
CDK5RAP3-210ENST00000578733 ZNF561-AS1K7EIQ3 104 aa7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 LECT2O14960 151 aa7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 KRTDAPP60985 99 aa7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 TNP2Q05952 138 aa7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 Q8N814 137 aa7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 MRPL35Q9NZE8 188 aaKnown RBP7.45□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGLV4-69A0A075B6H9 119 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGLV5-45A0A087WSX0 123 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 hDV102S1A0JD36 115 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 LRCOL1A6NCL2 159 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 DPM2O94777 84 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PRSS2P07478 247 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 COX6A2Q02221 97 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 ODF1Q14990 250 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 TMEM170BQ5T4T1 132 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 MAPKAPK5-AS1Q8N8E1 139 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 NTN5Q8WTR8 489 aaPredicted RBP7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 ORAOV1Q8WV07 137 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 HIST1H2BLQ99880 126 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 CDKN2A-AS1Q9UH64 79 aa7.44□□□□□ -1.22
CDK5RAP3-210ENST00000578733 GVQW2A0A096LPI5 108 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-210ENST00000578733 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGKCP01834 107 aa7.43□□□□□ -1.22
CDK5RAP3-210ENST00000578733 C3orf79P0CE67 100 aa7.43□□□□□ -1.22
CDK5RAP3-210ENST00000578733 ZNF22P17026 224 aaPredicted RBP7.43□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGHV3-64A0A075B6Q5 118 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 C11orf86A6NJI1 115 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 F8WDY8 70 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 HERVK_113P61574 105 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 SPAG11BQ08648 103 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 CDPF1Q6NVV7 123 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 C15orf56Q8N910 161 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PKD1P98161 4303 aa7.42□□□□□ -1.22
CDK5RAP3-210ENST00000578733 HIGD2BQ4VC39 106 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 LINC01545Q5VT33 79 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PGPEP1Q9NXJ5 209 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 TOMM7Q9P0U1 55 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 PKIGQ9Y2B9 76 aa7.41□□□□□ -1.22
CDK5RAP3-210ENST00000578733 DNAH11Q96DT5 4516 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 IGLV5-52A0A0A0MRZ9 124 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 SPINK8P0C7L1 97 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 WFDC2Q14508 124 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 Q8IZM0 81 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 DNAH5Q8TE73 4624 aa7.4□□□□□ -1.22
CDK5RAP3-210ENST00000578733 DYNC1H1Q14204 4646 aaKnown RBP7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 PKHD1P08F94 4074 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 SMIM1B2RUZ4 78 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 CXCL5P42830 114 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 CKS1BP61024 79 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 C6orf226Q5I0X4 101 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 SFTA2Q6UW10 78 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 COX7B2Q8TF08 81 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 CAMK2N2Q96S95 79 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 PMCHL2Q9BQD1 86 aa7.39□□□□□ -1.23
CDK5RAP3-210ENST00000578733 ABCA13Q86UQ4 5058 aa7.38□□□□□ -1.23
CDK5RAP3-210ENST00000578733 TMEM223A0PJW6 202 aa7.38□□□□□ -1.23
CDK5RAP3-210ENST00000578733 NDUFA1O15239 70 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms