RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 FAM19A5Q7Z5A7 132 aaPredicted RBP12.62□□□□□ -0.39
TSEN54-205ENST00000578415 KRTAP7-1Q8IUC3 87 aa12.62□□□□□ -0.39
TSEN54-205ENST00000578415 SMIM7Q9BQ49 75 aa12.62□□□□□ -0.39
TSEN54-205ENST00000578415 F8WDY8 70 aa12.61□□□□□ -0.39
TSEN54-205ENST00000578415 NDUFA1O15239 70 aa12.61□□□□□ -0.39
TSEN54-205ENST00000578415 TMEM18Q96B42 140 aa12.61□□□□□ -0.39
TSEN54-205ENST00000578415 C6orf48Q9UBA6 75 aa12.61□□□□□ -0.39
TSEN54-205ENST00000578415 V9GYV3 84 aa12.61□□□□□ -0.39
TSEN54-205ENST00000578415 PPP1R2P9O14990 202 aa12.6□□□□□ -0.39
TSEN54-205ENST00000578415 RPL39P62891 51 aaKnown RBP12.6□□□□□ -0.39
TSEN54-205ENST00000578415 PEA15Q15121 130 aa12.6□□□□□ -0.39
TSEN54-205ENST00000578415 UNQ6190/PRO20217Q6UXQ8 127 aa12.6□□□□□ -0.39
TSEN54-205ENST00000578415 MRPL51Q4U2R6 128 aaKnown RBP12.59□□□□□ -0.39
TSEN54-205ENST00000578415 SRSF3P84103 164 aaKnown RBP12.58□□□□□ -0.4
TSEN54-205ENST00000578415 GAGE2EQ4V326 116 aa12.58□□□□□ -0.4
TSEN54-205ENST00000578415 FAM104BQ5XKR9 115 aa12.58□□□□□ -0.4
TSEN54-205ENST00000578415 COMMD7Q86VX2 200 aa12.58□□□□□ -0.4
TSEN54-205ENST00000578415 SMDT1Q9H4I9 107 aa12.58□□□□□ -0.4
TSEN54-205ENST00000578415 GAGE2DQ9UEU5 116 aa12.58□□□□□ -0.4
TSEN54-205ENST00000578415 LINC00862A6NCI5 91 aa12.57□□□□□ -0.4
TSEN54-205ENST00000578415 PRR4Q16378 134 aa12.57□□□□□ -0.4
TSEN54-205ENST00000578415 TMEM241Q24JQ0 296 aa12.57□□□□□ -0.4
TSEN54-205ENST00000578415 C20orf78Q9BR46 151 aa12.57□□□□□ -0.4
TSEN54-205ENST00000578415 ZNF727A8MUV8 499 aa12.56□□□□□ -0.4
TSEN54-205ENST00000578415 RPL32P62910 135 aaKnown RBP12.56□□□□□ -0.4
TSEN54-205ENST00000578415 TRBV24-1A0A075B6N3 115 aa12.55□□□□□ -0.4
TSEN54-205ENST00000578415 M0QXV9 152 aa12.55□□□□□ -0.4
TSEN54-205ENST00000578415 SRP19P09132 144 aaKnown RBP12.55□□□□□ -0.4
TSEN54-205ENST00000578415 MRPS36P82909 103 aaKnown RBP12.55□□□□□ -0.4
TSEN54-205ENST00000578415 SPANXA1Q9NS26 97 aa12.55□□□□□ -0.4
TSEN54-205ENST00000578415 C9JQL5 133 aa12.54□□□□□ -0.4
TSEN54-205ENST00000578415 UBE2D1P51668 147 aa12.54□□□□□ -0.4
TSEN54-205ENST00000578415 KIAA0087Q14695 138 aa12.54□□□□□ -0.4
TSEN54-205ENST00000578415 IFITM10A6NMD0 228 aa12.53□□□□□ -0.4
TSEN54-205ENST00000578415 UBE2BP63146 152 aa12.53□□□□□ -0.4
TSEN54-205ENST00000578415 HBBP68871 147 aa12.53□□□□□ -0.4
TSEN54-205ENST00000578415 NAT8BQ9UHF3 227 aa12.53□□□□□ -0.4
TSEN54-205ENST00000578415 TCAPO15273 167 aa12.52□□□□□ -0.41
TSEN54-205ENST00000578415 RPL13AP40429 203 aaKnown RBP12.52□□□□□ -0.41
TSEN54-205ENST00000578415 SMIM2Q9BVW6 85 aa12.52□□□□□ -0.41
TSEN54-205ENST00000578415 TNFRSF6BO95407 300 aa12.51□□□□□ -0.41
TSEN54-205ENST00000578415 CKS2P33552 79 aa12.51□□□□□ -0.41
TSEN54-205ENST00000578415 FAM74A3Q4VXF1 159 aa12.5□□□□□ -0.41
TSEN54-205ENST00000578415 C9orf129Q5T035 196 aaKnown RBP12.5□□□□□ -0.41
TSEN54-205ENST00000578415 UQCC3Q6UW78 93 aa12.5□□□□□ -0.41
TSEN54-205ENST00000578415 KRTAP9-2Q9BYQ4 174 aa12.5□□□□□ -0.41
TSEN54-205ENST00000578415 TGIF2-C20orf24A0A0A6YYL0 155 aa12.48□□□□□ -0.41
TSEN54-205ENST00000578415 TRBV30A0A0K0K1B3 111 aa12.48□□□□□ -0.41
TSEN54-205ENST00000578415 SMIM27A0A1W2PRY6 76 aa12.48□□□□□ -0.41
TSEN54-205ENST00000578415 NDUFC2-KCTD14E9PQ53 114 aa12.48□□□□□ -0.41
TSEN54-205ENST00000578415 C2orf82Q6UX34 121 aa12.48□□□□□ -0.41
TSEN54-205ENST00000578415 SLC7A5P1Q8MH63 180 aa12.48□□□□□ -0.41
TSEN54-205ENST00000578415 CARHSP1Q9Y2V2 147 aaKnown RBP12.48□□□□□ -0.41
TSEN54-205ENST00000578415 RPL23P62829 140 aaKnown RBP12.47□□□□□ -0.41
TSEN54-205ENST00000578415 D6R8Y8 96 aa12.46□□□□□ -0.41
TSEN54-205ENST00000578415 NPYP01303 97 aa12.46□□□□□ -0.41
TSEN54-205ENST00000578415 NDUFA5Q16718 116 aa12.46□□□□□ -0.41
TSEN54-205ENST00000578415 LINC00242Q5T6M2 205 aa12.46□□□□□ -0.41
TSEN54-205ENST00000578415 A0A0U1RQV1 116 aa12.45□□□□□ -0.42
TSEN54-205ENST00000578415 A0A1B0GW15 77 aa12.45□□□□□ -0.42
TSEN54-205ENST00000578415 ZNF861PO60384 105 aa12.45□□□□□ -0.42
TSEN54-205ENST00000578415 TMEM218A2RU14 115 aa12.44□□□□□ -0.42
TSEN54-205ENST00000578415 IGLV4-3A0A075B6K6 122 aa12.43□□□□□ -0.42
TSEN54-205ENST00000578415 ADIRFQ15847 76 aa12.43□□□□□ -0.42
TSEN54-205ENST00000578415 PACRGQ96M98 296 aaPredicted RBP12.43□□□□□ -0.42
TSEN54-205ENST00000578415 F8W036 122 aa12.42□□□□□ -0.42
TSEN54-205ENST00000578415 IFI27P40305 119 aaPredicted RBP12.42□□□□□ -0.42
TSEN54-205ENST00000578415 PYGO1Q9Y3Y4 419 aa12.42□□□□□ -0.42
TSEN54-205ENST00000578415 TSPAN13O95857 204 aa12.41□□□□□ -0.42
TSEN54-205ENST00000578415 MRPL54Q6P161 138 aaKnown RBP12.41□□□□□ -0.42
TSEN54-205ENST00000578415 NAT8Q9UHE5 227 aa12.41□□□□□ -0.42
TSEN54-205ENST00000578415 A0A1B0GXF2 115 aa12.4□□□□□ -0.42
TSEN54-205ENST00000578415 PPBPP02775 128 aa12.39□□□□□ -0.43
TSEN54-205ENST00000578415 LINC01561Q8N1V8 128 aa12.39□□□□□ -0.43
TSEN54-205ENST00000578415 TMEM141Q96I45 108 aa12.39□□□□□ -0.43
TSEN54-205ENST00000578415 C22orf24Q9Y442 160 aa12.39□□□□□ -0.43
TSEN54-205ENST00000578415 ADCYAP1P18509 176 aa12.38□□□□□ -0.43
TSEN54-205ENST00000578415 LCE2AQ5TA79 106 aaPredicted RBP12.38□□□□□ -0.43
TSEN54-205ENST00000578415 A0A087X002 238 aa12.37□□□□□ -0.43
TSEN54-205ENST00000578415 NUPR1O60356 82 aa12.37□□□□□ -0.43
TSEN54-205ENST00000578415 S100A8P05109 93 aa12.37□□□□□ -0.43
TSEN54-205ENST00000578415 RAB5AP20339 215 aa12.37□□□□□ -0.43
TSEN54-205ENST00000578415 LINC00469Q8N7U9 141 aa12.37□□□□□ -0.43
TSEN54-205ENST00000578415 SEC11CQ9BY50 192 aa12.37□□□□□ -0.43
TSEN54-205ENST00000578415 ZC2HC1BQ5TFG8 222 aa12.36□□□□□ -0.43
TSEN54-205ENST00000578415 CTDSP1Q9GZU7 261 aa12.36□□□□□ -0.43
TSEN54-205ENST00000578415 FAT4Q6V0I7 4981 aa12.35□□□□□ -0.43
TSEN54-205ENST00000578415 TEX43Q6ZNM6 134 aa12.35□□□□□ -0.43
TSEN54-205ENST00000578415 ORMDL3Q8N138 153 aa12.35□□□□□ -0.43
TSEN54-205ENST00000578415 XAGE1AQ9HD64 81 aa12.35□□□□□ -0.43
TSEN54-205ENST00000578415 TMEM136Q6ZRR5 245 aa12.34□□□□□ -0.43
TSEN54-205ENST00000578415 LINC00173Q6ZV60 143 aa12.34□□□□□ -0.43
TSEN54-205ENST00000578415 LBHQ53QV2 105 aaPredicted RBP12.33□□□□□ -0.44
TSEN54-205ENST00000578415 PRELID3AQ96N28 172 aa12.33□□□□□ -0.44
TSEN54-205ENST00000578415 TOMM7Q9P0U1 55 aa12.33□□□□□ -0.44
TSEN54-205ENST00000578415 APOC3P02656 99 aa12.32□□□□□ -0.44
TSEN54-205ENST00000578415 PRSS2P07478 247 aa12.32□□□□□ -0.44
TSEN54-205ENST00000578415 CKS1BP61024 79 aa12.32□□□□□ -0.44
TSEN54-205ENST00000578415 PNRC1Q12796 327 aaPredicted RBP12.32□□□□□ -0.44
TSEN54-205ENST00000578415 C10orf91Q5T1B1 145 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms