RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 HMCN2Q8NDA2 5059 aa7.43□□□□□ -1.22
CDK5RAP3-204ENST00000577664 FABP4P15090 132 aa7.42□□□□□ -1.22
CDK5RAP3-204ENST00000577664 SEC11AP67812 179 aa7.42□□□□□ -1.22
CDK5RAP3-204ENST00000577664 Q6ZRN7 208 aaPredicted RBP7.42□□□□□ -1.22
CDK5RAP3-204ENST00000577664 UBE2WQ96B02 151 aa7.42□□□□□ -1.22
CDK5RAP3-204ENST00000577664 TINCRA0A1B0GVN0 87 aa7.41□□□□□ -1.22
CDK5RAP3-204ENST00000577664 CRPP02741 224 aa7.41□□□□□ -1.22
CDK5RAP3-204ENST00000577664 PRSS1P07477 247 aa7.41□□□□□ -1.22
CDK5RAP3-204ENST00000577664 S100A2P29034 98 aa7.41□□□□□ -1.22
CDK5RAP3-204ENST00000577664 SS18Q15532 418 aa7.41□□□□□ -1.22
CDK5RAP3-204ENST00000577664 LINC00242Q5T6M2 205 aa7.41□□□□□ -1.22
CDK5RAP3-204ENST00000577664 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
CDK5RAP3-204ENST00000577664 RMI2Q96E14 147 aa7.41□□□□□ -1.22
CDK5RAP3-204ENST00000577664 MAP1LC3CQ9BXW4 147 aa7.41□□□□□ -1.22
CDK5RAP3-204ENST00000577664 IGLV5-45A0A087WSX0 123 aa7.4□□□□□ -1.22
CDK5RAP3-204ENST00000577664 IGHV3OR16-9A0A0B4J2B5 98 aa7.4□□□□□ -1.22
CDK5RAP3-204ENST00000577664 SYS1-DBNDD2H3BUS1 97 aa7.4□□□□□ -1.22
CDK5RAP3-204ENST00000577664 IGLC3P0DOY3 106 aa7.4□□□□□ -1.22
CDK5RAP3-204ENST00000577664 RNASE13Q5GAN3 156 aaKnown RBP7.4□□□□□ -1.22
CDK5RAP3-204ENST00000577664 ZC2HC1BQ5TFG8 222 aa7.4□□□□□ -1.22
CDK5RAP3-204ENST00000577664 PET117Q6UWS5 81 aa7.4□□□□□ -1.22
CDK5RAP3-204ENST00000577664 LINC01561Q8N1V8 128 aa7.4□□□□□ -1.22
CDK5RAP3-204ENST00000577664 C6orf223Q8N319 242 aa7.4□□□□□ -1.22
CDK5RAP3-204ENST00000577664 TM2D2Q9BX73 214 aa7.4□□□□□ -1.22
CDK5RAP3-204ENST00000577664 IGLV4-69A0A075B6H9 119 aa7.39□□□□□ -1.23
CDK5RAP3-204ENST00000577664 TRAV13-1A0A0B4J241 112 aa7.39□□□□□ -1.23
CDK5RAP3-204ENST00000577664 F8VRH5 84 aa7.39□□□□□ -1.23
CDK5RAP3-204ENST00000577664 C3orf79P0CE67 100 aa7.39□□□□□ -1.23
CDK5RAP3-204ENST00000577664 INAFM2P0DMQ5 153 aa7.39□□□□□ -1.23
CDK5RAP3-204ENST00000577664 HERVK_113P63121 156 aa7.39□□□□□ -1.23
CDK5RAP3-204ENST00000577664 ODF1Q14990 250 aa7.39□□□□□ -1.23
CDK5RAP3-204ENST00000577664 CHCHD10Q8WYQ3 142 aaPredicted RBP7.39□□□□□ -1.23
CDK5RAP3-204ENST00000577664 C1orf43Q9BWL3 253 aa7.39□□□□□ -1.23
CDK5RAP3-204ENST00000577664 M0R2N4 97 aa7.38□□□□□ -1.23
CDK5RAP3-204ENST00000577664 COX6A2Q02221 97 aa7.38□□□□□ -1.23
CDK5RAP3-204ENST00000577664 FOXI1Q12951 378 aa7.38□□□□□ -1.23
CDK5RAP3-204ENST00000577664 C1orf134Q5TEV5 83 aa7.38□□□□□ -1.23
CDK5RAP3-204ENST00000577664 LINC01545Q5VT33 79 aa7.38□□□□□ -1.23
CDK5RAP3-204ENST00000577664 CHTOPQ9Y3Y2 248 aaKnown RBP7.38□□□□□ -1.23
CDK5RAP3-204ENST00000577664 A0A087WZ39 114 aa7.37□□□□□ -1.23
CDK5RAP3-204ENST00000577664 A0A0J9YXV3 536 aa7.37□□□□□ -1.23
CDK5RAP3-204ENST00000577664 AKR1D1P51857 326 aa7.37□□□□□ -1.23
CDK5RAP3-204ENST00000577664 CLPSL2Q6UWE3 100 aa7.37□□□□□ -1.23
CDK5RAP3-204ENST00000577664 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
CDK5RAP3-204ENST00000577664 IGKV2D-24A0A075B6R9 120 aa7.36□□□□□ -1.23
CDK5RAP3-204ENST00000577664 C16orf90A8MZG2 172 aa7.36□□□□□ -1.23
CDK5RAP3-204ENST00000577664 Q9HAA7 133 aa7.36□□□□□ -1.23
CDK5RAP3-204ENST00000577664 MRPL35Q9NZE8 188 aaKnown RBP7.36□□□□□ -1.23
CDK5RAP3-204ENST00000577664 FAT1Q14517 4588 aa7.36□□□□□ -1.23
CDK5RAP3-204ENST00000577664 FLG2Q5D862 2391 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-204ENST00000577664 IGLV10-54A0A075B6I4 117 aa7.35□□□□□ -1.23
CDK5RAP3-204ENST00000577664 IGKV3OR2-268A0A0C4DH90 116 aa7.35□□□□□ -1.23
CDK5RAP3-204ENST00000577664 LRCOL1A6NCL2 159 aa7.35□□□□□ -1.23
CDK5RAP3-204ENST00000577664 GAGE12HA6NDE8 117 aa7.35□□□□□ -1.23
CDK5RAP3-204ENST00000577664 PLNP26678 52 aa7.35□□□□□ -1.23
CDK5RAP3-204ENST00000577664 XCL1P47992 114 aa7.35□□□□□ -1.23
CDK5RAP3-204ENST00000577664 C11orf86A6NJI1 115 aa7.34□□□□□ -1.23
CDK5RAP3-204ENST00000577664 EPM2AB3EWF7 344 aa7.34□□□□□ -1.23
CDK5RAP3-204ENST00000577664 KRTDAPP60985 99 aa7.34□□□□□ -1.23
CDK5RAP3-204ENST00000577664 GEMIN7Q9H840 131 aaKnown RBP7.34□□□□□ -1.23
CDK5RAP3-204ENST00000577664 CDKN2A-AS1Q9UH64 79 aa7.34□□□□□ -1.23
CDK5RAP3-204ENST00000577664 VPS13BQ7Z7G8 4022 aa7.33□□□□□ -1.24
CDK5RAP3-204ENST00000577664 COX7A2LO14548 114 aa7.33□□□□□ -1.24
CDK5RAP3-204ENST00000577664 DPM2O94777 84 aa7.33□□□□□ -1.24
CDK5RAP3-204ENST00000577664 IGKCP01834 107 aa7.33□□□□□ -1.24
CDK5RAP3-204ENST00000577664 ZNF22P17026 224 aaPredicted RBP7.33□□□□□ -1.24
CDK5RAP3-204ENST00000577664 CFAP161Q6P656 301 aa7.33□□□□□ -1.24
CDK5RAP3-204ENST00000577664 OR10D4PQ8NGN7 298 aa7.33□□□□□ -1.24
CDK5RAP3-204ENST00000577664 IGHV3-64A0A075B6Q5 118 aa7.32□□□□□ -1.24
CDK5RAP3-204ENST00000577664 IGHV1-58A0A0C4DH39 117 aa7.32□□□□□ -1.24
CDK5RAP3-204ENST00000577664 CHAC1Q9BUX1 264 aa7.32□□□□□ -1.24
CDK5RAP3-204ENST00000577664 IGLV5-39A0A0G2JS06 123 aa7.31□□□□□ -1.24
CDK5RAP3-204ENST00000577664 TMEM223A0PJW6 202 aa7.31□□□□□ -1.24
CDK5RAP3-204ENST00000577664 C20orf202A1L168 122 aa7.31□□□□□ -1.24
CDK5RAP3-204ENST00000577664 F8WDY8 70 aa7.31□□□□□ -1.24
CDK5RAP3-204ENST00000577664 H3BRM9 83 aa7.31□□□□□ -1.24
CDK5RAP3-204ENST00000577664 APOMO95445 188 aa7.31□□□□□ -1.24
CDK5RAP3-204ENST00000577664 JOSD1Q15040 202 aaPredicted RBP7.31□□□□□ -1.24
CDK5RAP3-204ENST00000577664 C5orf38Q86SI9 138 aa7.31□□□□□ -1.24
CDK5RAP3-204ENST00000577664 LINC00469Q8N7U9 141 aa7.31□□□□□ -1.24
CDK5RAP3-204ENST00000577664 C15orf56Q8N910 161 aa7.31□□□□□ -1.24
CDK5RAP3-204ENST00000577664 GVQW2A0A096LPI5 108 aaPredicted RBP7.3□□□□□ -1.24
CDK5RAP3-204ENST00000577664 SMIM1B2RUZ4 78 aa7.3□□□□□ -1.24
CDK5RAP3-204ENST00000577664 H0Y8G0 127 aa7.3□□□□□ -1.24
CDK5RAP3-204ENST00000577664 PSCAO43653 123 aa7.3□□□□□ -1.24
CDK5RAP3-204ENST00000577664 KIAA0087Q14695 138 aa7.3□□□□□ -1.24
CDK5RAP3-204ENST00000577664 A0A087WTM6 91 aa7.29□□□□□ -1.24
CDK5RAP3-204ENST00000577664 MALP21145 153 aa7.29□□□□□ -1.24
CDK5RAP3-204ENST00000577664 C14orf177Q52M58 125 aa7.29□□□□□ -1.24
CDK5RAP3-204ENST00000577664 TMEM170BQ5T4T1 132 aa7.29□□□□□ -1.24
CDK5RAP3-204ENST00000577664 SERTAD4-AS1Q5TG53 156 aa7.29□□□□□ -1.24
CDK5RAP3-204ENST00000577664 Q8IZM0 81 aa7.29□□□□□ -1.24
CDK5RAP3-204ENST00000577664 PMCHL2Q9BQD1 86 aa7.29□□□□□ -1.24
CDK5RAP3-204ENST00000577664 LOC105371267A0A1B0GV96 52 aa7.28□□□□□ -1.24
CDK5RAP3-204ENST00000577664 USP17L23D6RBM5 183 aa7.28□□□□□ -1.24
CDK5RAP3-204ENST00000577664 C2orf48Q96LS8 159 aa7.28□□□□□ -1.24
CDK5RAP3-204ENST00000577664 E9PLD3 99 aa7.27□□□□□ -1.25
CDK5RAP3-204ENST00000577664 TNP2Q05952 138 aa7.27□□□□□ -1.25
CDK5RAP3-204ENST00000577664 WFDC2Q14508 124 aa7.27□□□□□ -1.25
CDK5RAP3-204ENST00000577664 Q8N814 137 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms