RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SPTBN4Q9H254 2564 aa-0.26□□□□□ -2.45
TOP2A-202ENST00000577541 USH2AO75445 5202 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 ARHGEF12Q9NZN5 1544 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 TRBV6-1A0A0K0K1D8 114 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 SNAPC5O75971 98 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 SFT2D2O95562 160 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 IGLC1P0CG04 106 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 MYO7BQ6PIF6 2116 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 SPRR4Q96PI1 79 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 SPCS1Q9Y6A9 102 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 UBR4Q5T4S7 5183 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 SBF2Q86WG5 1849 aa-0.27□□□□□ -2.45
TOP2A-202ENST00000577541 TULP4Q9NRJ4 1543 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 SMG6Q86US8 1419 aaKnown RBP-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 SCAPERQ9BY12 1400 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 LINC00959A0A1B0GUT2 108 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 SSSCA1O60232 199 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 TNFP01375 233 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 SPRR1BP22528 89 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 Q0VG73 95 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 COX17Q14061 63 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 C10orf113Q5VZT2 155 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 C8orf59Q8N0T1 100 aaPredicted RBP-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 C1orf54Q8WWF1 131 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 PKHD1P08F94 4074 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 EHBP1L1Q8N3D4 1523 aa-0.28□□□□□ -2.45
TOP2A-202ENST00000577541 ADGRL2O95490 1459 aa-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 PZPP20742 1482 aa-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 DOPEY2Q9Y3R5 2298 aa-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 FLNAP21333 2647 aaKnown RBP-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 KTN1Q86UP2 1357 aaKnown RBP-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 MAP1BP46821 2468 aaKnown RBP-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 TPPP2P59282 170 aa-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 ARL2-SNX15V9GYD0 113 aa-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 TOP2BQ02880 1626 aa-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 MAP1AP78559 2803 aaPredicted RBP-0.29□□□□□ -2.46
TOP2A-202ENST00000577541 CSPG4Q6UVK1 2322 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 COL4A6Q14031 1691 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 UBE2L5PA0A1B0GUS4 154 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 FAM223BA6NKX1 122 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 F6UZH7 168 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 K7EQZ3 153 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 CORTO00230 105 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 UBE2D3P61077 147 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 GNG11P61952 73 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 UBE2D2P62837 147 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 UBE2L3P68036 154 aaKnown RBP-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 KLK9Q2XQG4 91 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 C2orf88Q9BSF0 95 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 NXT2Q9NPJ8 142 aaKnown RBP-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 ZANQ9Y493 2812 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 NLRP1Q9C000 1473 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 SPHKAPQ2M3C7 1700 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 NAIPQ13075 1403 aa-0.3□□□□□ -2.46
TOP2A-202ENST00000577541 SETXQ7Z333 2677 aaKnown RBP-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 PIGBOS1A0A0B4J2F0 54 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 APOC3P02656 99 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 S100A1P23297 94 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 DEFB123Q8N688 67 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 FDCSPQ8NFU4 85 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 FAM167A-AS1Q96KT0 104 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 LINC01600Q96MT4 127 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 MANBALQ9NQG1 85 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 CRIPTQ9P021 101 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 MAGI1Q96QZ7 1491 aaPredicted RBP-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 SRRM2Q9UQ35 2752 aaKnown RBP-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 RAPGEF6Q8TEU7 1601 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 REV3LO60673 3130 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 TSC2P49815 1807 aa-0.31□□□□□ -2.46
TOP2A-202ENST00000577541 PKD1P98161 4303 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 ABCA13Q86UQ4 5058 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 C1orf167Q5SNV9 1468 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 EFCAB10A6NFE3 127 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 GNG4P50150 75 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 PPP3R1P63098 170 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 IER3IP1Q9Y5U9 82 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 EP300Q09472 2414 aaPredicted RBP-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 KIAA0556O60303 1618 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 ABCC5O15440 1437 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 APC2O95996 2303 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 NRKQ7Z2Y5 1582 aa-0.32□□□□□ -2.46
TOP2A-202ENST00000577541 ARHGAP5Q13017 1502 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 WDR7Q9Y4E6 1490 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 EPPK1P58107 5090 aaKnown RBP-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 hADV29S1A0JD25 119 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 MGPP08493 103 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 COX6B1P14854 86 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 SNCAP37840 140 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 ASIPP42127 132 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 MT4P47944 62 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 DCDP81605 110 aaKnown RBP-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 HSD52Q0P140 79 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 PIGYQ3MUY2 71 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 TMEM263Q8WUH6 116 aaKnown RBP-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 SPTA1P02549 2419 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 DIP2CQ9Y2E4 1556 aa-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 GOLGA4Q13439 2230 aaKnown RBP-0.33□□□□□ -2.46
TOP2A-202ENST00000577541 POLA1P09884 1462 aaPredicted RBP-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 279.1 ms