RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 PDZD11Q5EBL8 140 aa7.04□□□□□ -1.28
SLC12A4-215ENST00000575857 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
SLC12A4-215ENST00000575857 TEX43Q6ZNM6 134 aa7.04□□□□□ -1.28
SLC12A4-215ENST00000575857 FAM19A3Q7Z5A8 133 aa7.04□□□□□ -1.28
SLC12A4-215ENST00000575857 Q8N1X5 172 aa7.04□□□□□ -1.28
SLC12A4-215ENST00000575857 SCGB3A1Q96QR1 104 aa7.04□□□□□ -1.28
SLC12A4-215ENST00000575857 VCX2Q9H322 139 aa7.04□□□□□ -1.28
SLC12A4-215ENST00000575857 GVQW2A0A096LPI5 108 aaPredicted RBP7.03□□□□□ -1.28
SLC12A4-215ENST00000575857 COX6A2Q02221 97 aa7.03□□□□□ -1.28
SLC12A4-215ENST00000575857 PMCHL1Q16048 86 aa7.03□□□□□ -1.28
SLC12A4-215ENST00000575857 CFAP161Q6P656 301 aa7.03□□□□□ -1.28
SLC12A4-215ENST00000575857 Q6ZN92 141 aa7.03□□□□□ -1.28
SLC12A4-215ENST00000575857 CHCHD1Q96BP2 118 aaKnown RBP7.03□□□□□ -1.28
SLC12A4-215ENST00000575857 IGHV1-58A0A0C4DH39 117 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 hDV102S1A0JD36 115 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 COX7A2LO14548 114 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST1H2BKO60814 126 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HBDP02042 147 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST1H2BJP06899 126 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST1H2BOP23527 126 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST1H2BBP33778 126 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST1H2BDP58876 126 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 CNBPP62633 177 aaKnown RBP7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST1H2BCP62807 126 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST2H2BEQ16778 126 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 PAPPA-AS1Q5QFB9 102 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 C5orf38Q86SI9 138 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST1H2BHQ93079 126 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST1H2BNQ99877 126 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 HIST1H2BMQ99879 126 aa7.02□□□□□ -1.29
SLC12A4-215ENST00000575857 LINC01620Q4KN68 170 aa7.01□□□□□ -1.29
SLC12A4-215ENST00000575857 HIGD2BQ4VC39 106 aa7.01□□□□□ -1.29
SLC12A4-215ENST00000575857 C2orf88Q9BSF0 95 aa7.01□□□□□ -1.29
SLC12A4-215ENST00000575857 A0A087WZ39 114 aa7□□□□□ -1.29
SLC12A4-215ENST00000575857 BAGE3Q86Y29 109 aa7□□□□□ -1.29
SLC12A4-215ENST00000575857 C9orf163Q8N9P6 203 aa7□□□□□ -1.29
SLC12A4-215ENST00000575857 CST9LQ9H4G1 147 aa7□□□□□ -1.29
SLC12A4-215ENST00000575857 IGHV3-64A0A075B6Q5 118 aa6.99□□□□□ -1.29
SLC12A4-215ENST00000575857 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.99□□□□□ -1.29
SLC12A4-215ENST00000575857 NUPR1O60356 82 aa6.99□□□□□ -1.29
SLC12A4-215ENST00000575857 SERF1AO75920 110 aa6.99□□□□□ -1.29
SLC12A4-215ENST00000575857 PMVKQ15126 192 aa6.99□□□□□ -1.29
SLC12A4-215ENST00000575857 Q6ZSA8 131 aa6.99□□□□□ -1.29
SLC12A4-215ENST00000575857 LINC01561Q8N1V8 128 aa6.99□□□□□ -1.29
SLC12A4-215ENST00000575857 LINC00526Q96FQ7 95 aa6.99□□□□□ -1.29
SLC12A4-215ENST00000575857 FAM30AQ9NZY2 134 aa6.99□□□□□ -1.29
SLC12A4-215ENST00000575857 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
SLC12A4-215ENST00000575857 HSBP1O75506 76 aa6.98□□□□□ -1.29
SLC12A4-215ENST00000575857 ATP5LO75964 103 aa6.98□□□□□ -1.29
SLC12A4-215ENST00000575857 MALP21145 153 aa6.98□□□□□ -1.29
SLC12A4-215ENST00000575857 XGP55808 180 aa6.98□□□□□ -1.29
SLC12A4-215ENST00000575857 FAM19A2Q8N3H0 131 aa6.98□□□□□ -1.29
SLC12A4-215ENST00000575857 IGLV5-45A0A087WSX0 123 aa6.97□□□□□ -1.29
SLC12A4-215ENST00000575857 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
SLC12A4-215ENST00000575857 APOMO95445 188 aa6.97□□□□□ -1.29
SLC12A4-215ENST00000575857 NDUFA6P56556 154 aa6.97□□□□□ -1.29
SLC12A4-215ENST00000575857 HERVK_113P63121 156 aa6.97□□□□□ -1.29
SLC12A4-215ENST00000575857 SEC11AP67812 179 aa6.97□□□□□ -1.29
SLC12A4-215ENST00000575857 COA6Q5JTJ3 125 aaKnown RBP6.97□□□□□ -1.29
SLC12A4-215ENST00000575857 SDIM1Q6ZPB5 146 aa6.97□□□□□ -1.29
SLC12A4-215ENST00000575857 OR10D4PQ8NGN7 298 aa6.97□□□□□ -1.29
SLC12A4-215ENST00000575857 IGLV4-69A0A075B6H9 119 aa6.96□□□□□ -1.3
SLC12A4-215ENST00000575857 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
SLC12A4-215ENST00000575857 KIAA0087Q14695 138 aa6.96□□□□□ -1.3
SLC12A4-215ENST00000575857 ORAOV1Q8WV07 137 aa6.96□□□□□ -1.3
SLC12A4-215ENST00000575857 C2orf48Q96LS8 159 aa6.96□□□□□ -1.3
SLC12A4-215ENST00000575857 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
SLC12A4-215ENST00000575857 FAT1Q14517 4588 aa6.95□□□□□ -1.3
SLC12A4-215ENST00000575857 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.95□□□□□ -1.3
SLC12A4-215ENST00000575857 ZNF561-AS1K7EIQ3 104 aa6.95□□□□□ -1.3
SLC12A4-215ENST00000575857 IGLC3P0DOY3 106 aa6.95□□□□□ -1.3
SLC12A4-215ENST00000575857 IFI27L1Q96BM0 104 aa6.95□□□□□ -1.3
SLC12A4-215ENST00000575857 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
SLC12A4-215ENST00000575857 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
SLC12A4-215ENST00000575857 PANO1I0J062 215 aa6.94□□□□□ -1.3
SLC12A4-215ENST00000575857 SYCNQ0VAF6 134 aa6.94□□□□□ -1.3
SLC12A4-215ENST00000575857 Q6ZRU5 148 aa6.94□□□□□ -1.3
SLC12A4-215ENST00000575857 CARD19Q96LW7 228 aa6.94□□□□□ -1.3
SLC12A4-215ENST00000575857 TMA7Q9Y2S6 64 aaKnown RBP6.94□□□□□ -1.3
SLC12A4-215ENST00000575857 TRAV12-1A0A0B4J245 112 aa6.93□□□□□ -1.3
SLC12A4-215ENST00000575857 S100A6P06703 90 aa6.93□□□□□ -1.3
SLC12A4-215ENST00000575857 HAMPP81172 84 aa6.93□□□□□ -1.3
SLC12A4-215ENST00000575857 CIRBPQ14011 172 aaKnown RBP6.93□□□□□ -1.3
SLC12A4-215ENST00000575857 LINC00469Q8N7U9 141 aa6.93□□□□□ -1.3
SLC12A4-215ENST00000575857 SMIM1B2RUZ4 78 aa6.92□□□□□ -1.3
SLC12A4-215ENST00000575857 EPM2AB3EWF7 344 aa6.92□□□□□ -1.3
SLC12A4-215ENST00000575857 F8WDY8 70 aa6.92□□□□□ -1.3
SLC12A4-215ENST00000575857 LEPROTL1O95214 131 aa6.92□□□□□ -1.3
SLC12A4-215ENST00000575857 ZNF22P17026 224 aaPredicted RBP6.92□□□□□ -1.3
SLC12A4-215ENST00000575857 C10orf25Q5T742 122 aa6.92□□□□□ -1.3
SLC12A4-215ENST00000575857 CAMK2N2Q96S95 79 aa6.92□□□□□ -1.3
SLC12A4-215ENST00000575857 CHAC1Q9BUX1 264 aa6.92□□□□□ -1.3
SLC12A4-215ENST00000575857 MRPL35Q9NZE8 188 aaKnown RBP6.92□□□□□ -1.3
SLC12A4-215ENST00000575857 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.92□□□□□ -1.3
SLC12A4-215ENST00000575857 C5orf52A6NGY3 159 aa6.91□□□□□ -1.3
SLC12A4-215ENST00000575857 C11orf86A6NJI1 115 aa6.91□□□□□ -1.3
SLC12A4-215ENST00000575857 INAFM2P0DMQ5 153 aa6.91□□□□□ -1.3
SLC12A4-215ENST00000575857 RNF151Q2KHN1 245 aa6.91□□□□□ -1.3
SLC12A4-215ENST00000575857 UNQ6190/PRO20217Q6UXQ8 127 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms