RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 LINC00242Q5T6M2 205 aa8.55□□□□□ -1.04
NPLOC4-214ENST00000573876 HIST3H2BBQ8N257 126 aa8.55□□□□□ -1.04
NPLOC4-214ENST00000573876 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
NPLOC4-214ENST00000573876 DYNC1H1Q14204 4646 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-214ENST00000573876 DNAH5Q8TE73 4624 aa8.55□□□□□ -1.04
NPLOC4-214ENST00000573876 EPPK1P58107 5090 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-214ENST00000573876 A0A0J9YXV3 536 aa8.54□□□□□ -1.04
NPLOC4-214ENST00000573876 C5orf52A6NGY3 159 aa8.54□□□□□ -1.04
NPLOC4-214ENST00000573876 C14orf177Q52M58 125 aa8.54□□□□□ -1.04
NPLOC4-214ENST00000573876 CD164L2Q6UWJ8 174 aa8.54□□□□□ -1.04
NPLOC4-214ENST00000573876 MAP1LC3CQ9BXW4 147 aa8.54□□□□□ -1.04
NPLOC4-214ENST00000573876 A0A1B0GVY2 172 aa8.53□□□□□ -1.04
NPLOC4-214ENST00000573876 LRCOL1A6NCL2 159 aa8.53□□□□□ -1.04
NPLOC4-214ENST00000573876 LECT2O14960 151 aa8.53□□□□□ -1.04
NPLOC4-214ENST00000573876 FOXI1Q12951 378 aa8.53□□□□□ -1.04
NPLOC4-214ENST00000573876 C5orf38Q86SI9 138 aa8.53□□□□□ -1.04
NPLOC4-214ENST00000573876 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
NPLOC4-214ENST00000573876 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.05
NPLOC4-214ENST00000573876 SEC11AP67812 179 aa8.52□□□□□ -1.05
NPLOC4-214ENST00000573876 CFAP161Q6P656 301 aa8.52□□□□□ -1.05
NPLOC4-214ENST00000573876 FAM19A3Q7Z5A8 133 aa8.52□□□□□ -1.05
NPLOC4-214ENST00000573876 SPATA12Q7Z6I5 190 aa8.52□□□□□ -1.05
NPLOC4-214ENST00000573876 PACRGQ96M98 296 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-214ENST00000573876 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-214ENST00000573876 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-214ENST00000573876 IGHV3OR16-9A0A0B4J2B5 98 aa8.51□□□□□ -1.05
NPLOC4-214ENST00000573876 TINCRA0A1B0GVN0 87 aa8.51□□□□□ -1.05
NPLOC4-214ENST00000573876 Q8N814 137 aa8.51□□□□□ -1.05
NPLOC4-214ENST00000573876 HIST1H2BLQ99880 126 aa8.51□□□□□ -1.05
NPLOC4-214ENST00000573876 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
NPLOC4-214ENST00000573876 USP17L23D6RBM5 183 aa8.5□□□□□ -1.05
NPLOC4-214ENST00000573876 SYS1-DBNDD2H3BUS1 97 aa8.5□□□□□ -1.05
NPLOC4-214ENST00000573876 COX7A2LO14548 114 aa8.5□□□□□ -1.05
NPLOC4-214ENST00000573876 C3orf79P0CE67 100 aa8.5□□□□□ -1.05
NPLOC4-214ENST00000573876 MALP21145 153 aa8.5□□□□□ -1.05
NPLOC4-214ENST00000573876 KRTDAPP60985 99 aa8.5□□□□□ -1.05
NPLOC4-214ENST00000573876 HERVK_113P63121 156 aa8.5□□□□□ -1.05
NPLOC4-214ENST00000573876 NTN5Q8WTR8 489 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-214ENST00000573876 MRPL35Q9NZE8 188 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-214ENST00000573876 LRP1BQ9NZR2 4599 aa8.49□□□□□ -1.05
NPLOC4-214ENST00000573876 IGLV4-69A0A075B6H9 119 aa8.49□□□□□ -1.05
NPLOC4-214ENST00000573876 IGLC3P0DOY3 106 aa8.49□□□□□ -1.05
NPLOC4-214ENST00000573876 WFDC2Q14508 124 aa8.49□□□□□ -1.05
NPLOC4-214ENST00000573876 ODF1Q14990 250 aa8.49□□□□□ -1.05
NPLOC4-214ENST00000573876 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
NPLOC4-214ENST00000573876 CDKN2A-AS1Q9UH64 79 aa8.49□□□□□ -1.05
NPLOC4-214ENST00000573876 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
NPLOC4-214ENST00000573876 LINC00469Q8N7U9 141 aa8.48□□□□□ -1.05
NPLOC4-214ENST00000573876 PMCHL2Q9BQD1 86 aa8.48□□□□□ -1.05
NPLOC4-214ENST00000573876 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.47□□□□□ -1.05
NPLOC4-214ENST00000573876 A0A087WZ39 114 aa8.47□□□□□ -1.05
NPLOC4-214ENST00000573876 IGLV5-52A0A0A0MRZ9 124 aa8.47□□□□□ -1.05
NPLOC4-214ENST00000573876 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
NPLOC4-214ENST00000573876 C16orf90A8MZG2 172 aa8.47□□□□□ -1.05
NPLOC4-214ENST00000573876 F8VRH5 84 aa8.47□□□□□ -1.05
NPLOC4-214ENST00000573876 KRTAP10-2P60368 255 aa8.47□□□□□ -1.05
NPLOC4-214ENST00000573876 CHAC1Q9BUX1 264 aa8.47□□□□□ -1.05
NPLOC4-214ENST00000573876 IGHV1-58A0A0C4DH39 117 aa8.46□□□□□ -1.06
NPLOC4-214ENST00000573876 hDV102S1A0JD36 115 aa8.46□□□□□ -1.06
NPLOC4-214ENST00000573876 APOMO95445 188 aa8.46□□□□□ -1.06
NPLOC4-214ENST00000573876 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.06
NPLOC4-214ENST00000573876 IGLV5-45A0A087WSX0 123 aa8.45□□□□□ -1.06
NPLOC4-214ENST00000573876 H3BRM9 83 aa8.45□□□□□ -1.06
NPLOC4-214ENST00000573876 DPM2O94777 84 aa8.45□□□□□ -1.06
NPLOC4-214ENST00000573876 ZNF22P17026 224 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-214ENST00000573876 HIGD2BQ4VC39 106 aa8.45□□□□□ -1.06
NPLOC4-214ENST00000573876 C15orf56Q8N910 161 aa8.45□□□□□ -1.06
NPLOC4-214ENST00000573876 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
NPLOC4-214ENST00000573876 IGKCP01834 107 aa8.44□□□□□ -1.06
NPLOC4-214ENST00000573876 SPINK8P0C7L1 97 aa8.44□□□□□ -1.06
NPLOC4-214ENST00000573876 LINC01561Q8N1V8 128 aa8.44□□□□□ -1.06
NPLOC4-214ENST00000573876 OR10D4PQ8NGN7 298 aa8.44□□□□□ -1.06
NPLOC4-214ENST00000573876 LINC00526Q96FQ7 95 aa8.44□□□□□ -1.06
NPLOC4-214ENST00000573876 KRTAP17-1Q9BYP8 105 aa8.44□□□□□ -1.06
NPLOC4-214ENST00000573876 DNAH8Q96JB1 4490 aa8.44□□□□□ -1.06
NPLOC4-214ENST00000573876 ZNF561-AS1K7EIQ3 104 aa8.43□□□□□ -1.06
NPLOC4-214ENST00000573876 PLNP26678 52 aa8.43□□□□□ -1.06
NPLOC4-214ENST00000573876 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
NPLOC4-214ENST00000573876 LINC01545Q5VT33 79 aa8.43□□□□□ -1.06
NPLOC4-214ENST00000573876 ORAOV1Q8WV07 137 aa8.43□□□□□ -1.06
NPLOC4-214ENST00000573876 GVQW2A0A096LPI5 108 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-214ENST00000573876 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-214ENST00000573876 GCSHP23434 173 aa8.42□□□□□ -1.06
NPLOC4-214ENST00000573876 TOMM7Q9P0U1 55 aa8.42□□□□□ -1.06
NPLOC4-214ENST00000573876 C20orf202A1L168 122 aa8.41□□□□□ -1.06
NPLOC4-214ENST00000573876 SMIM1B2RUZ4 78 aa8.41□□□□□ -1.06
NPLOC4-214ENST00000573876 C6orf226Q5I0X4 101 aa8.41□□□□□ -1.06
NPLOC4-214ENST00000573876 TMEM223A0PJW6 202 aa8.4□□□□□ -1.06
NPLOC4-214ENST00000573876 SCGB1D1O95968 90 aa8.4□□□□□ -1.06
NPLOC4-214ENST00000573876 SLPIP03973 132 aa8.4□□□□□ -1.06
NPLOC4-214ENST00000573876 PRSS2P07478 247 aa8.4□□□□□ -1.06
NPLOC4-214ENST00000573876 SPAG11BQ08648 103 aa8.4□□□□□ -1.06
NPLOC4-214ENST00000573876 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-214ENST00000573876 KIAA0087Q14695 138 aa8.39□□□□□ -1.07
NPLOC4-214ENST00000573876 ATOH7Q8N100 152 aa8.38□□□□□ -1.07
NPLOC4-214ENST00000573876 STPG4Q8N801 248 aa8.38□□□□□ -1.07
NPLOC4-214ENST00000573876 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
NPLOC4-214ENST00000573876 CAMK2N2Q96S95 79 aa8.38□□□□□ -1.07
NPLOC4-214ENST00000573876 APOBP04114 4563 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-214ENST00000573876 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms