RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TRAV8-4A0A0B4J246 113 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 SYS1-DBNDD2H3BUS1 97 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 CCL25O15444 150 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 PSCAO43653 123 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 PLNP26678 52 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 AKR1D1P51857 326 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 LINC00173Q6ZV60 143 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 CHAC1Q9BUX1 264 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 CST9LQ9H4G1 147 aa4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 CHTOPQ9Y3Y2 248 aaKnown RBP4.46□□□□□ -1.7
CTDNEP1-204ENST00000570484 LINC00959A0A1B0GUT2 108 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 IBA57-AS1B1ANH7 110 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 F8VRH5 84 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 M0R2N4 97 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 C3orf79P0CE67 100 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 XCL1P47992 114 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 HERVK_113P63121 156 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 PET117Q6UWS5 81 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 NFE4Q86UQ8 179 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 LINC00469Q8N7U9 141 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 OR10D4PQ8NGN7 298 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 AMELXQ99217 191 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 TM2D2Q9BX73 214 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 PRR34Q9NV39 138 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 FAM30AQ9NZY2 134 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 COX11Q9Y6N1 276 aa4.45□□□□□ -1.7
CTDNEP1-204ENST00000570484 LCE6AA0A183 80 aa4.44□□□□□ -1.7
CTDNEP1-204ENST00000570484 PRSS29PA6NIE9 313 aa4.44□□□□□ -1.7
CTDNEP1-204ENST00000570484 H3BRM9 83 aa4.44□□□□□ -1.7
CTDNEP1-204ENST00000570484 DPM2O94777 84 aa4.44□□□□□ -1.7
CTDNEP1-204ENST00000570484 SCGB1D1O95968 90 aa4.44□□□□□ -1.7
CTDNEP1-204ENST00000570484 MALP21145 153 aa4.44□□□□□ -1.7
CTDNEP1-204ENST00000570484 UBE2D1P51668 147 aa4.44□□□□□ -1.7
CTDNEP1-204ENST00000570484 HERVK_113P61574 105 aa4.44□□□□□ -1.7
CTDNEP1-204ENST00000570484 ZC2HC1BQ5TFG8 222 aa4.44□□□□□ -1.7
CTDNEP1-204ENST00000570484 A0A0J9YXV3 536 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 TINCRA0A1B0GVN0 87 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 GAGE12HA6NDE8 117 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 HSBP1L1C9JCN9 74 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 COX7A2LO14548 114 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 IGKCP01834 107 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 IGLC3P0DOY3 106 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 TMEM170BQ5T4T1 132 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 ENHOQ6UWT2 76 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 SPATA12Q7Z6I5 190 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 PMCHL2Q9BQD1 86 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 KRTAP1-5Q9BYS1 174 aa4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 MRPL35Q9NZE8 188 aaKnown RBP4.43□□□□□ -1.7
CTDNEP1-204ENST00000570484 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
CTDNEP1-204ENST00000570484 C11orf86A6NJI1 115 aa4.42□□□□□ -1.7
CTDNEP1-204ENST00000570484 APOMO95445 188 aa4.42□□□□□ -1.7
CTDNEP1-204ENST00000570484 LINC00242Q5T6M2 205 aa4.42□□□□□ -1.7
CTDNEP1-204ENST00000570484 C1orf134Q5TEV5 83 aa4.42□□□□□ -1.7
CTDNEP1-204ENST00000570484 LINC01545Q5VT33 79 aa4.42□□□□□ -1.7
CTDNEP1-204ENST00000570484 C6orf223Q8N319 242 aa4.42□□□□□ -1.7
CTDNEP1-204ENST00000570484 FAM104AQ969W3 186 aa4.42□□□□□ -1.7
CTDNEP1-204ENST00000570484 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
CTDNEP1-204ENST00000570484 TGP01266 2768 aa4.41□□□□□ -1.7
CTDNEP1-204ENST00000570484 PRSS2P07478 247 aa4.41□□□□□ -1.7
CTDNEP1-204ENST00000570484 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
CTDNEP1-204ENST00000570484 CFAP161Q6P656 301 aa4.41□□□□□ -1.7
CTDNEP1-204ENST00000570484 FAM19A3Q7Z5A8 133 aa4.41□□□□□ -1.7
CTDNEP1-204ENST00000570484 C5orf38Q86SI9 138 aa4.41□□□□□ -1.7
CTDNEP1-204ENST00000570484 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
CTDNEP1-204ENST00000570484 FOXI1Q12951 378 aa4.4□□□□□ -1.71
CTDNEP1-204ENST00000570484 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
CTDNEP1-204ENST00000570484 Q6ZR54 194 aa4.4□□□□□ -1.71
CTDNEP1-204ENST00000570484 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
CTDNEP1-204ENST00000570484 ORAOV1Q8WV07 137 aa4.4□□□□□ -1.71
CTDNEP1-204ENST00000570484 CDKN2A-AS1Q9UH64 79 aa4.4□□□□□ -1.71
CTDNEP1-204ENST00000570484 IGHV3-64A0A075B6Q5 118 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 IGLV5-45A0A087WSX0 123 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 A0A087WZ39 114 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 IGHV3OR16-9A0A0B4J2B5 98 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 IGHV1-58A0A0C4DH39 117 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 B5MCH6 92 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 SPINK8P0C7L1 97 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 SPAG11BQ08648 103 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 JOSD1Q15040 202 aaPredicted RBP4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 C14orf177Q52M58 125 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 VAMP8Q9BV40 100 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 TOMM7Q9P0U1 55 aa4.39□□□□□ -1.71
CTDNEP1-204ENST00000570484 hDV102S1A0JD36 115 aa4.38□□□□□ -1.71
CTDNEP1-204ENST00000570484 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
CTDNEP1-204ENST00000570484 SMIM1B2RUZ4 78 aa4.38□□□□□ -1.71
CTDNEP1-204ENST00000570484 USP17L23D6RBM5 183 aa4.38□□□□□ -1.71
CTDNEP1-204ENST00000570484 LECT2O14960 151 aa4.38□□□□□ -1.71
CTDNEP1-204ENST00000570484 SMIM6P0DI80 62 aa4.38□□□□□ -1.71
CTDNEP1-204ENST00000570484 LGALS3P17931 250 aaKnown RBP4.38□□□□□ -1.71
CTDNEP1-204ENST00000570484 S100A12P80511 92 aa4.38□□□□□ -1.71
CTDNEP1-204ENST00000570484 COX6A2Q02221 97 aa4.38□□□□□ -1.71
CTDNEP1-204ENST00000570484 LINC01561Q8N1V8 128 aa4.38□□□□□ -1.71
CTDNEP1-204ENST00000570484 STARD9Q9P2P6 4700 aa4.37□□□□□ -1.71
CTDNEP1-204ENST00000570484 TMEM223A0PJW6 202 aa4.37□□□□□ -1.71
CTDNEP1-204ENST00000570484 CXCL5P42830 114 aa4.37□□□□□ -1.71
CTDNEP1-204ENST00000570484 NMUP48645 174 aa4.37□□□□□ -1.71
CTDNEP1-204ENST00000570484 CKS1BP61024 79 aa4.37□□□□□ -1.71
CTDNEP1-204ENST00000570484 HIGD2BQ4VC39 106 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms