RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 FAM19A5Q7Z5A7 132 aaPredicted RBP12.81□□□□□ -0.36
PKD1-240ENST00000570253 SPANXA1Q9NS26 97 aa12.81□□□□□ -0.36
PKD1-240ENST00000570253 V9GYV3 84 aa12.81□□□□□ -0.36
PKD1-240ENST00000570253 TGIF2-C20orf24A0A0A6YYL0 155 aa12.8□□□□□ -0.36
PKD1-240ENST00000570253 IFITM10A6NMD0 228 aa12.8□□□□□ -0.36
PKD1-240ENST00000570253 TLX1NBP0CAT3 122 aa12.8□□□□□ -0.36
PKD1-240ENST00000570253 UBE2BP63146 152 aa12.8□□□□□ -0.36
PKD1-240ENST00000570253 HBBP68871 147 aa12.8□□□□□ -0.36
PKD1-240ENST00000570253 A0A1B0GW15 77 aa12.79□□□□□ -0.36
PKD1-240ENST00000570253 RPL32P62910 135 aaKnown RBP12.79□□□□□ -0.36
PKD1-240ENST00000570253 RPL39P62891 51 aaKnown RBP12.78□□□□□ -0.36
PKD1-240ENST00000570253 GAGE2EQ4V326 116 aa12.78□□□□□ -0.36
PKD1-240ENST00000570253 GAGE2DQ9UEU5 116 aa12.78□□□□□ -0.36
PKD1-240ENST00000570253 TRBV24-1A0A075B6N3 115 aa12.77□□□□□ -0.37
PKD1-240ENST00000570253 IGHV3OR16-9A0A0B4J2B5 98 aa12.77□□□□□ -0.37
PKD1-240ENST00000570253 S100A8P05109 93 aa12.77□□□□□ -0.37
PKD1-240ENST00000570253 RPL13AP40429 203 aaKnown RBP12.77□□□□□ -0.37
PKD1-240ENST00000570253 MRPS36P82909 103 aaKnown RBP12.77□□□□□ -0.37
PKD1-240ENST00000570253 FAM168BA1KXE4 195 aa12.76□□□□□ -0.37
PKD1-240ENST00000570253 SRP19P09132 144 aaKnown RBP12.76□□□□□ -0.37
PKD1-240ENST00000570253 FAM74A3Q4VXF1 159 aa12.76□□□□□ -0.37
PKD1-240ENST00000570253 SMIM2Q9BVW6 85 aa12.76□□□□□ -0.37
PKD1-240ENST00000570253 F8W036 122 aa12.75□□□□□ -0.37
PKD1-240ENST00000570253 M0QXV9 152 aa12.75□□□□□ -0.37
PKD1-240ENST00000570253 TNFRSF6BO95407 300 aa12.75□□□□□ -0.37
PKD1-240ENST00000570253 UNQ6190/PRO20217Q6UXQ8 127 aa12.75□□□□□ -0.37
PKD1-240ENST00000570253 AKAP14Q86UN6 197 aa12.75□□□□□ -0.37
PKD1-240ENST00000570253 SMDT1Q9H4I9 107 aa12.75□□□□□ -0.37
PKD1-240ENST00000570253 C6orf48Q9UBA6 75 aa12.75□□□□□ -0.37
PKD1-240ENST00000570253 LPAP08519 4548 aa12.75□□□□□ -0.37
PKD1-240ENST00000570253 IFI27P40305 119 aaPredicted RBP12.74□□□□□ -0.37
PKD1-240ENST00000570253 ADIRFQ15847 76 aa12.74□□□□□ -0.37
PKD1-240ENST00000570253 PACRGQ96M98 296 aaPredicted RBP12.74□□□□□ -0.37
PKD1-240ENST00000570253 RAB5AP20339 215 aa12.73□□□□□ -0.37
PKD1-240ENST00000570253 PRR4Q16378 134 aa12.73□□□□□ -0.37
PKD1-240ENST00000570253 C10orf25Q5T742 122 aa12.73□□□□□ -0.37
PKD1-240ENST00000570253 TRBV30A0A0K0K1B3 111 aa12.72□□□□□ -0.37
PKD1-240ENST00000570253 A0A0U1RQV1 116 aa12.71□□□□□ -0.37
PKD1-240ENST00000570253 SMIM27A0A1W2PRY6 76 aa12.71□□□□□ -0.37
PKD1-240ENST00000570253 D6R8Y8 96 aa12.71□□□□□ -0.37
PKD1-240ENST00000570253 RPL23P62829 140 aaKnown RBP12.71□□□□□ -0.37
PKD1-240ENST00000570253 PPBPP02775 128 aa12.7□□□□□ -0.38
PKD1-240ENST00000570253 NAT8Q9UHE5 227 aa12.7□□□□□ -0.38
PKD1-240ENST00000570253 NDUFC2-KCTD14E9PQ53 114 aa12.69□□□□□ -0.38
PKD1-240ENST00000570253 KRTAP11-1Q8IUC1 163 aa12.68□□□□□ -0.38
PKD1-240ENST00000570253 NPYP01303 97 aa12.67□□□□□ -0.38
PKD1-240ENST00000570253 MRPL54Q6P161 138 aaKnown RBP12.67□□□□□ -0.38
PKD1-240ENST00000570253 CARHSP1Q9Y2V2 147 aaKnown RBP12.67□□□□□ -0.38
PKD1-240ENST00000570253 PRSS2P07478 247 aa12.66□□□□□ -0.38
PKD1-240ENST00000570253 KRTAP1-4P0C5Y4 121 aa12.66□□□□□ -0.38
PKD1-240ENST00000570253 TEX43Q6ZNM6 134 aa12.66□□□□□ -0.38
PKD1-240ENST00000570253 FAM104AQ969W3 186 aa12.66□□□□□ -0.38
PKD1-240ENST00000570253 TMEM141Q96I45 108 aa12.66□□□□□ -0.38
PKD1-240ENST00000570253 C2orf88Q9BSF0 95 aa12.66□□□□□ -0.38
PKD1-240ENST00000570253 PYGO1Q9Y3Y4 419 aa12.66□□□□□ -0.38
PKD1-240ENST00000570253 KIAA0087Q14695 138 aa12.65□□□□□ -0.38
PKD1-240ENST00000570253 ORMDL3Q8N138 153 aa12.65□□□□□ -0.38
PKD1-240ENST00000570253 LINC00242Q5T6M2 205 aa12.64□□□□□ -0.39
PKD1-240ENST00000570253 Q6ZN92 141 aa12.64□□□□□ -0.39
PKD1-240ENST00000570253 LINC01561Q8N1V8 128 aa12.64□□□□□ -0.39
PKD1-240ENST00000570253 NUPR1O60356 82 aa12.63□□□□□ -0.39
PKD1-240ENST00000570253 CKS1BP61024 79 aa12.63□□□□□ -0.39
PKD1-240ENST00000570253 C2orf82Q6UX34 121 aa12.63□□□□□ -0.39
PKD1-240ENST00000570253 IGLV4-3A0A075B6K6 122 aa12.62□□□□□ -0.39
PKD1-240ENST00000570253 ZNF861PO60384 105 aa12.62□□□□□ -0.39
PKD1-240ENST00000570253 LBHQ53QV2 105 aaPredicted RBP12.62□□□□□ -0.39
PKD1-240ENST00000570253 TMEM136Q6ZRR5 245 aa12.62□□□□□ -0.39
PKD1-240ENST00000570253 PEA15Q15121 130 aa12.61□□□□□ -0.39
PKD1-240ENST00000570253 C9orf129Q5T035 196 aaKnown RBP12.61□□□□□ -0.39
PKD1-240ENST00000570253 PRELID3AQ96N28 172 aa12.61□□□□□ -0.39
PKD1-240ENST00000570253 TOMM7Q9P0U1 55 aa12.61□□□□□ -0.39
PKD1-240ENST00000570253 KRTAP7-1Q8IUC3 87 aa12.6□□□□□ -0.39
PKD1-240ENST00000570253 A0A1B0GXF2 115 aa12.59□□□□□ -0.39
PKD1-240ENST00000570253 C6orf226Q5I0X4 101 aa12.59□□□□□ -0.39
PKD1-240ENST00000570253 ATP5L2Q7Z4Y8 100 aa12.59□□□□□ -0.39
PKD1-240ENST00000570253 hCG_2014768A0A024R1R8 64 aa12.58□□□□□ -0.4
PKD1-240ENST00000570253 CYSLTR1Q9Y271 337 aa12.58□□□□□ -0.4
PKD1-240ENST00000570253 VCX2Q9H322 139 aa12.57□□□□□ -0.4
PKD1-240ENST00000570253 MAP1LC3AQ9H492 121 aa12.57□□□□□ -0.4
PKD1-240ENST00000570253 LAMTOR2Q9Y2Q5 125 aa12.57□□□□□ -0.4
PKD1-240ENST00000570253 C22orf24Q9Y442 160 aa12.56□□□□□ -0.4
PKD1-240ENST00000570253 LOC389332A0A1B0GUA5 103 aa12.55□□□□□ -0.4
PKD1-240ENST00000570253 RPL28P46779 137 aaKnown RBP12.55□□□□□ -0.4
PKD1-240ENST00000570253 Q8IZM0 81 aa12.55□□□□□ -0.4
PKD1-240ENST00000570253 LINC00469Q8N7U9 141 aa12.55□□□□□ -0.4
PKD1-240ENST00000570253 ALKBH7Q9BT30 221 aaPredicted RBP12.55□□□□□ -0.4
PKD1-240ENST00000570253 TSPAN13O95857 204 aa12.54□□□□□ -0.4
PKD1-240ENST00000570253 SEC11AP67812 179 aa12.54□□□□□ -0.4
PKD1-240ENST00000570253 CTDSP1Q9GZU7 261 aa12.54□□□□□ -0.4
PKD1-240ENST00000570253 ORMDL2Q53FV1 153 aa12.53□□□□□ -0.4
PKD1-240ENST00000570253 PAPPA-AS1Q5QFB9 102 aa12.53□□□□□ -0.4
PKD1-240ENST00000570253 C2orf66Q6UXQ4 117 aa12.53□□□□□ -0.4
PKD1-240ENST00000570253 C9JQL5 133 aa12.52□□□□□ -0.41
PKD1-240ENST00000570253 NPSP0C0P6 89 aa12.52□□□□□ -0.41
PKD1-240ENST00000570253 XAGE1AQ9HD64 81 aa12.52□□□□□ -0.41
PKD1-240ENST00000570253 PRSS47A8MTI9 375 aa12.51□□□□□ -0.41
PKD1-240ENST00000570253 CRYGAP11844 174 aa12.51□□□□□ -0.41
PKD1-240ENST00000570253 HERVK_113P63121 156 aa12.51□□□□□ -0.41
PKD1-240ENST00000570253 Q8N8P6 123 aa12.51□□□□□ -0.41
PKD1-240ENST00000570253 TYMSOSQ8TAI1 123 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms