RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	LINC01546	A6NGU7	62 aa		11.65	□□□□□ -0.54
PKD1-238	ENST00000570150	TOMM6	Q96B49	74 aa		11.65	□□□□□ -0.54
PKD1-238	ENST00000570150	RNASE13	Q5GAN3	156 aa	Known RBP	11.64	□□□□□ -0.55
PKD1-238	ENST00000570150	ERAS	Q7Z444	233 aa		11.64	□□□□□ -0.55
PKD1-238	ENST00000570150	C2orf48	Q96LS8	159 aa		11.64	□□□□□ -0.55
PKD1-238	ENST00000570150	HIGD2B	Q4VC39	106 aa		11.63	□□□□□ -0.55
PKD1-238	ENST00000570150	SDIM1	Q6ZPB5	146 aa		11.63	□□□□□ -0.55
PKD1-238	ENST00000570150	LINC01561	Q8N1V8	128 aa		11.63	□□□□□ -0.55
PKD1-238	ENST00000570150	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.62	□□□□□ -0.55
PKD1-238	ENST00000570150	IGIP	A6NJ69	53 aa		11.62	□□□□□ -0.55
PKD1-238	ENST00000570150	PLA2G1B	P04054	148 aa	Known RBP	11.62	□□□□□ -0.55
PKD1-238	ENST00000570150	SCGB3A1	Q96QR1	104 aa		11.62	□□□□□ -0.55
PKD1-238	ENST00000570150	SYCN	Q0VAF6	134 aa		11.61	□□□□□ -0.55
PKD1-238	ENST00000570150	CARD19	Q96LW7	228 aa		11.61	□□□□□ -0.55
PKD1-238	ENST00000570150	AMELX	Q99217	191 aa		11.61	□□□□□ -0.55
PKD1-238	ENST00000570150	FAM30A	Q9NZY2	134 aa		11.61	□□□□□ -0.55
PKD1-238	ENST00000570150	LINC01620	Q4KN68	170 aa		11.6	□□□□□ -0.55
PKD1-238	ENST00000570150	DPH3	Q96FX2	82 aa		11.6	□□□□□ -0.55
PKD1-238	ENST00000570150	IGLV4-69	A0A075B6H9	119 aa		11.59	□□□□□ -0.55
PKD1-238	ENST00000570150		A0A087WZ39	114 aa		11.59	□□□□□ -0.55
PKD1-238	ENST00000570150	LINC00614	P0C842	121 aa		11.59	□□□□□ -0.55
PKD1-238	ENST00000570150	UBE2D1	P51668	147 aa		11.59	□□□□□ -0.55
PKD1-238	ENST00000570150	HERVK_113	P63121	156 aa		11.59	□□□□□ -0.55
PKD1-238	ENST00000570150	SCX	Q7RTU7	201 aa		11.59	□□□□□ -0.55
PKD1-238	ENST00000570150	FAM19A3	Q7Z5A8	133 aa		11.59	□□□□□ -0.55
PKD1-238	ENST00000570150	C5orf38	Q86SI9	138 aa		11.59	□□□□□ -0.55
PKD1-238	ENST00000570150	FAM104A	Q969W3	186 aa		11.59	□□□□□ -0.55
PKD1-238	ENST00000570150	OPRPN	Q99935	248 aa	Predicted RBP	11.59	□□□□□ -0.55
PKD1-238	ENST00000570150	RNF151	Q2KHN1	245 aa		11.58	□□□□□ -0.56
PKD1-238	ENST00000570150	LINC00242	Q5T6M2	205 aa		11.58	□□□□□ -0.56
PKD1-238	ENST00000570150		Q5VSD8	79 aa		11.58	□□□□□ -0.56
PKD1-238	ENST00000570150	CAMK2N2	Q96S95	79 aa		11.58	□□□□□ -0.56
PKD1-238	ENST00000570150	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.57	□□□□□ -0.56
PKD1-238	ENST00000570150	SPAG11B	Q08648	103 aa		11.57	□□□□□ -0.56
PKD1-238	ENST00000570150	CIRBP	Q14011	172 aa	Known RBP	11.57	□□□□□ -0.56
PKD1-238	ENST00000570150	CIRBP-AS1	Q8TBR5	109 aa		11.57	□□□□□ -0.56
PKD1-238	ENST00000570150	GEMIN7	Q9H840	131 aa	Known RBP	11.57	□□□□□ -0.56
PKD1-238	ENST00000570150	SLPI	P03973	132 aa		11.56	□□□□□ -0.56
PKD1-238	ENST00000570150	C18orf32	Q8TCD1	76 aa		11.56	□□□□□ -0.56
PKD1-238	ENST00000570150	ORAOV1	Q8WV07	137 aa		11.56	□□□□□ -0.56
PKD1-238	ENST00000570150	NDUFA1	O15239	70 aa		11.55	□□□□□ -0.56
PKD1-238	ENST00000570150	LOC107984640	A0A0U1RRK4	108 aa		11.54	□□□□□ -0.56
PKD1-238	ENST00000570150	HBD	P02042	147 aa		11.54	□□□□□ -0.56
PKD1-238	ENST00000570150	COX6A2	Q02221	97 aa		11.54	□□□□□ -0.56
PKD1-238	ENST00000570150	SLC7A5P1	Q8MH63	180 aa		11.54	□□□□□ -0.56
PKD1-238	ENST00000570150	CHCHD1	Q96BP2	118 aa	Known RBP	11.54	□□□□□ -0.56
PKD1-238	ENST00000570150	PACRG	Q96M98	296 aa	Predicted RBP	11.54	□□□□□ -0.56
PKD1-238	ENST00000570150	YPEL4	Q96NS1	127 aa		11.54	□□□□□ -0.56
PKD1-238	ENST00000570150	ATP5L	O75964	103 aa		11.53	□□□□□ -0.56
PKD1-238	ENST00000570150	SMR3B	P02814	79 aa	Predicted RBP	11.53	□□□□□ -0.56
PKD1-238	ENST00000570150	PRSS2	P07478	247 aa		11.53	□□□□□ -0.56
PKD1-238	ENST00000570150	PMVK	Q15126	192 aa		11.53	□□□□□ -0.56
PKD1-238	ENST00000570150	LINC00528	Q8N1L1	170 aa		11.53	□□□□□ -0.56
PKD1-238	ENST00000570150	SPACA4	Q8TDM5	124 aa		11.53	□□□□□ -0.56
PKD1-238	ENST00000570150	MRPL35	Q9NZE8	188 aa	Known RBP	11.53	□□□□□ -0.56
PKD1-238	ENST00000570150	TINCR	A0A1B0GVN0	87 aa		11.51	□□□□□ -0.57
PKD1-238	ENST00000570150	LINC00173	Q6ZV60	143 aa		11.51	□□□□□ -0.57
PKD1-238	ENST00000570150	CBLN2	Q8IUK8	224 aa		11.51	□□□□□ -0.57
PKD1-238	ENST00000570150	C7orf33	Q8WU49	177 aa		11.5	□□□□□ -0.57
PKD1-238	ENST00000570150	CST9L	Q9H4G1	147 aa		11.5	□□□□□ -0.57
PKD1-238	ENST00000570150	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.5	□□□□□ -0.57
PKD1-238	ENST00000570150	FAT1	Q14517	4588 aa		11.5	□□□□□ -0.57
PKD1-238	ENST00000570150	TRBV30	A0A0K0K1B3	111 aa		11.49	□□□□□ -0.57
PKD1-238	ENST00000570150		H3BRM9	83 aa		11.49	□□□□□ -0.57
PKD1-238	ENST00000570150	CXCL5	P42830	114 aa		11.49	□□□□□ -0.57
PKD1-238	ENST00000570150	PLAC8	Q9NZF1	115 aa		11.49	□□□□□ -0.57
PKD1-238	ENST00000570150	INAFM2	P0DMQ5	153 aa		11.48	□□□□□ -0.57
PKD1-238	ENST00000570150	CKS1B	P61024	79 aa		11.48	□□□□□ -0.57
PKD1-238	ENST00000570150	HAMP	P81172	84 aa		11.48	□□□□□ -0.57
PKD1-238	ENST00000570150	MAJIN	Q3KP22	176 aa		11.48	□□□□□ -0.57
PKD1-238	ENST00000570150		Q6ZRU5	148 aa		11.48	□□□□□ -0.57
PKD1-238	ENST00000570150		Q8IZM0	81 aa		11.48	□□□□□ -0.57
PKD1-238	ENST00000570150		A0A087WYN8	130 aa		11.47	□□□□□ -0.57
PKD1-238	ENST00000570150	C6orf226	Q5I0X4	101 aa		11.47	□□□□□ -0.57
PKD1-238	ENST00000570150	BAGE3	Q86Y29	109 aa		11.47	□□□□□ -0.57
PKD1-238	ENST00000570150	LINC00469	Q8N7U9	141 aa		11.47	□□□□□ -0.57
PKD1-238	ENST00000570150	LINC00526	Q96FQ7	95 aa		11.47	□□□□□ -0.57
PKD1-238	ENST00000570150	IGKV2-24	A0A0C4DH68	120 aa		11.46	□□□□□ -0.57
PKD1-238	ENST00000570150	PTTG1IP	P53801	180 aa		11.46	□□□□□ -0.57
PKD1-238	ENST00000570150	IGLV5-45	A0A087WSX0	123 aa		11.45	□□□□□ -0.58
PKD1-238	ENST00000570150	HSBP1	O75506	76 aa		11.45	□□□□□ -0.58
PKD1-238	ENST00000570150	TLX1NB	P0CAT3	122 aa		11.45	□□□□□ -0.58
PKD1-238	ENST00000570150	PDZD11	Q5EBL8	140 aa		11.45	□□□□□ -0.58
PKD1-238	ENST00000570150	STPG4	Q8N801	248 aa		11.45	□□□□□ -0.58
PKD1-238	ENST00000570150	DNAH8	Q96JB1	4490 aa		11.45	□□□□□ -0.58
PKD1-238	ENST00000570150	RPL37A	P61513	92 aa	Known RBP	11.44	□□□□□ -0.58
PKD1-238	ENST00000570150	CDKN2A-AS1	Q9UH64	79 aa		11.44	□□□□□ -0.58
PKD1-238	ENST00000570150		A0A096LNI7	61 aa		11.43	□□□□□ -0.58
PKD1-238	ENST00000570150		A0A0J9YXV3	536 aa		11.43	□□□□□ -0.58
PKD1-238	ENST00000570150	TRGC2	P03986	189 aa		11.43	□□□□□ -0.58
PKD1-238	ENST00000570150	NDUFA6	P56556	154 aa		11.43	□□□□□ -0.58
PKD1-238	ENST00000570150	SFTA2	Q6UW10	78 aa		11.43	□□□□□ -0.58
PKD1-238	ENST00000570150	RPL18A	Q02543	176 aa	Known RBP	11.42	□□□□□ -0.58
PKD1-238	ENST00000570150	GAGE2B	Q13066	116 aa		11.42	□□□□□ -0.58
PKD1-238	ENST00000570150	KIAA0087	Q14695	138 aa		11.42	□□□□□ -0.58
PKD1-238	ENST00000570150	ZC2HC1B	Q5TFG8	222 aa		11.42	□□□□□ -0.58
PKD1-238	ENST00000570150	VPS13B	Q7Z7G8	4022 aa		11.41	□□□□□ -0.58
PKD1-238	ENST00000570150		F8VRH5	84 aa		11.41	□□□□□ -0.58
PKD1-238	ENST00000570150	CHTF8	P0CG12	524 aa		11.41	□□□□□ -0.58
PKD1-238	ENST00000570150	URB1-AS1	Q96HZ7	61 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms