RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-222ENST00000569963 LINC00242Q5T6M2 205 aa12.83□□□□□ -0.36
NAE1-222ENST00000569963 MALP21145 153 aa12.82□□□□□ -0.36
NAE1-222ENST00000569963 ZC2HC1BQ5TFG8 222 aa12.82□□□□□ -0.36
NAE1-222ENST00000569963 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.81□□□□□ -0.36
NAE1-222ENST00000569963 C5orf38Q86SI9 138 aa12.81□□□□□ -0.36
NAE1-222ENST00000569963 C9orf163Q8N9P6 203 aa12.81□□□□□ -0.36
NAE1-222ENST00000569963 APOMO95445 188 aa12.8□□□□□ -0.36
NAE1-222ENST00000569963 SLPIP03973 132 aa12.8□□□□□ -0.36
NAE1-222ENST00000569963 SEC11AP67812 179 aa12.8□□□□□ -0.36
NAE1-222ENST00000569963 HIGD2BQ4VC39 106 aa12.8□□□□□ -0.36
NAE1-222ENST00000569963 PDZD11Q5EBL8 140 aa12.8□□□□□ -0.36
NAE1-222ENST00000569963 BAGE3Q86Y29 109 aa12.8□□□□□ -0.36
NAE1-222ENST00000569963 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.79□□□□□ -0.36
NAE1-222ENST00000569963 COX6A2Q02221 97 aa12.79□□□□□ -0.36
NAE1-222ENST00000569963 A0A087WZ39 114 aa12.78□□□□□ -0.36
NAE1-222ENST00000569963 ATP6V1G1O75348 118 aa12.78□□□□□ -0.36
NAE1-222ENST00000569963 PMVKQ15126 192 aa12.78□□□□□ -0.36
NAE1-222ENST00000569963 PMCHL1Q16048 86 aa12.78□□□□□ -0.36
NAE1-222ENST00000569963 LINC01561Q8N1V8 128 aa12.78□□□□□ -0.36
NAE1-222ENST00000569963 CST9LQ9H4G1 147 aa12.78□□□□□ -0.36
NAE1-222ENST00000569963 ZNF561-AS1K7EIQ3 104 aa12.77□□□□□ -0.37
NAE1-222ENST00000569963 ATP5LO75964 103 aa12.77□□□□□ -0.37
NAE1-222ENST00000569963 KIAA1109Q2LD37 5005 aa12.77□□□□□ -0.37
NAE1-222ENST00000569963 IGHV3-64A0A075B6Q5 118 aa12.76□□□□□ -0.37
NAE1-222ENST00000569963 HERVK_113P63121 156 aa12.76□□□□□ -0.37
NAE1-222ENST00000569963 LINC01620Q4KN68 170 aa12.76□□□□□ -0.37
NAE1-222ENST00000569963 Q6ZSA8 131 aa12.76□□□□□ -0.37
NAE1-222ENST00000569963 OR10D4PQ8NGN7 298 aa12.76□□□□□ -0.37
NAE1-222ENST00000569963 HSBP1O75506 76 aa12.75□□□□□ -0.37
NAE1-222ENST00000569963 IGLV4-69A0A075B6H9 119 aa12.73□□□□□ -0.37
NAE1-222ENST00000569963 A0A0J9YXV3 536 aa12.73□□□□□ -0.37
NAE1-222ENST00000569963 TINCRA0A1B0GVN0 87 aa12.73□□□□□ -0.37
NAE1-222ENST00000569963 XGP55808 180 aa12.73□□□□□ -0.37
NAE1-222ENST00000569963 SDIM1Q6ZPB5 146 aa12.73□□□□□ -0.37
NAE1-222ENST00000569963 C2orf48Q96LS8 159 aa12.73□□□□□ -0.37
NAE1-222ENST00000569963 GEMIN7Q9H840 131 aaKnown RBP12.73□□□□□ -0.37
NAE1-222ENST00000569963 FAM30AQ9NZY2 134 aa12.73□□□□□ -0.37
NAE1-222ENST00000569963 F8WDY8 70 aa12.72□□□□□ -0.37
NAE1-222ENST00000569963 SERF1AO75920 110 aa12.72□□□□□ -0.37
NAE1-222ENST00000569963 LINC00310P59036 64 aa12.72□□□□□ -0.37
NAE1-222ENST00000569963 ORAOV1Q8WV07 137 aa12.72□□□□□ -0.37
NAE1-222ENST00000569963 LINC00526Q96FQ7 95 aa12.72□□□□□ -0.37
NAE1-222ENST00000569963 SPAG11BQ08648 103 aa12.71□□□□□ -0.37
NAE1-222ENST00000569963 SYCNQ0VAF6 134 aa12.71□□□□□ -0.37
NAE1-222ENST00000569963 RYR1P21817 5038 aa12.71□□□□□ -0.38
NAE1-222ENST00000569963 IGLV5-45A0A087WSX0 123 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST1H2BKO60814 126 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST1H2BJP06899 126 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST1H2BOP23527 126 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST1H2BBP33778 126 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST1H2BDP58876 126 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST1H2BCP62807 126 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST2H2BEQ16778 126 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.7□□□□□ -0.38
NAE1-222ENST00000569963 FAM19A2Q8N3H0 131 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST1H2BHQ93079 126 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST1H2BNQ99877 126 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 HIST1H2BMQ99879 126 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 CDKN2A-AS1Q9UH64 79 aa12.7□□□□□ -0.38
NAE1-222ENST00000569963 APOBP04114 4563 aaKnown RBP12.69□□□□□ -0.38
NAE1-222ENST00000569963 IFI27L1Q96BM0 104 aa12.69□□□□□ -0.38
NAE1-222ENST00000569963 CARD19Q96LW7 228 aa12.69□□□□□ -0.38
NAE1-222ENST00000569963 NDUFA6P56556 154 aa12.68□□□□□ -0.38
NAE1-222ENST00000569963 CAMK2N2Q96S95 79 aa12.68□□□□□ -0.38
NAE1-222ENST00000569963 NUPR1O60356 82 aa12.67□□□□□ -0.38
NAE1-222ENST00000569963 IGLC3P0DOY3 106 aa12.67□□□□□ -0.38
NAE1-222ENST00000569963 KIAA0087Q14695 138 aa12.67□□□□□ -0.38
NAE1-222ENST00000569963 PKIGQ9Y2B9 76 aa12.67□□□□□ -0.38
NAE1-222ENST00000569963 DNAH8Q96JB1 4490 aa12.67□□□□□ -0.38
NAE1-222ENST00000569963 TRAV12-1A0A0B4J245 112 aa12.66□□□□□ -0.38
NAE1-222ENST00000569963 RNF151Q2KHN1 245 aa12.66□□□□□ -0.38
NAE1-222ENST00000569963 Q6ZRU5 148 aa12.66□□□□□ -0.38
NAE1-222ENST00000569963 LINC00469Q8N7U9 141 aa12.66□□□□□ -0.38
NAE1-222ENST00000569963 CHAC1Q9BUX1 264 aa12.66□□□□□ -0.38
NAE1-222ENST00000569963 HERC2O95714 4834 aa12.65□□□□□ -0.38
NAE1-222ENST00000569963 LEPROTL1O95214 131 aa12.65□□□□□ -0.38
NAE1-222ENST00000569963 PACRGQ96M98 296 aaPredicted RBP12.65□□□□□ -0.38
NAE1-222ENST00000569963 MRPL35Q9NZE8 188 aaKnown RBP12.65□□□□□ -0.38
NAE1-222ENST00000569963 NDUFA1O15239 70 aa12.64□□□□□ -0.39
NAE1-222ENST00000569963 CIRBPQ14011 172 aaKnown RBP12.64□□□□□ -0.39
NAE1-222ENST00000569963 Q8IZM0 81 aa12.63□□□□□ -0.39
NAE1-222ENST00000569963 HSPB8Q9UJY1 196 aa12.63□□□□□ -0.39
NAE1-222ENST00000569963 SMIM1B2RUZ4 78 aa12.62□□□□□ -0.39
NAE1-222ENST00000569963 H3BRM9 83 aa12.62□□□□□ -0.39
NAE1-222ENST00000569963 PRSS2P07478 247 aa12.62□□□□□ -0.39
NAE1-222ENST00000569963 CHTOPQ9Y3Y2 248 aaKnown RBP12.62□□□□□ -0.39
NAE1-222ENST00000569963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.62□□□□□ -0.39
NAE1-222ENST00000569963 HSPG2P98160 4391 aa12.62□□□□□ -0.39
NAE1-222ENST00000569963 C6orf226Q5I0X4 101 aa12.61□□□□□ -0.39
NAE1-222ENST00000569963 SCXQ7RTU7 201 aa12.61□□□□□ -0.39
NAE1-222ENST00000569963 LOC107984640A0A0U1RRK4 108 aa12.6□□□□□ -0.39
NAE1-222ENST00000569963 HAMPP81172 84 aa12.6□□□□□ -0.39
NAE1-222ENST00000569963 COA6Q5JTJ3 125 aaKnown RBP12.6□□□□□ -0.39
NAE1-222ENST00000569963 UNQ6190/PRO20217Q6UXQ8 127 aa12.6□□□□□ -0.39
NAE1-222ENST00000569963 Q8N1X5 172 aa12.6□□□□□ -0.39
NAE1-222ENST00000569963 CIRBP-AS1Q8TBR5 109 aa12.6□□□□□ -0.39
NAE1-222ENST00000569963 LINC00474Q9P2X8 69 aa12.6□□□□□ -0.39
NAE1-222ENST00000569963 PANO1I0J062 215 aa12.59□□□□□ -0.39
NAE1-222ENST00000569963 ZNF22P17026 224 aaPredicted RBP12.59□□□□□ -0.39
NAE1-222ENST00000569963 C10orf25Q5T742 122 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms