RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 VSIG2Q96IQ7 327 aa10.23□□□□□ -0.77
GCOM1-213ENST00000569945 TENM1Q9UKZ4 2725 aa10.22□□□□□ -0.77
GCOM1-213ENST00000569945 TRAV12-3A0A0B4J271 114 aa10.22□□□□□ -0.77
GCOM1-213ENST00000569945 INAFM2P0DMQ5 153 aa10.22□□□□□ -0.77
GCOM1-213ENST00000569945 DEFB1P60022 68 aa10.22□□□□□ -0.77
GCOM1-213ENST00000569945 A8MZ25 164 aa10.22□□□□□ -0.77
GCOM1-213ENST00000569945 M0QY20 66 aa10.22□□□□□ -0.77
GCOM1-213ENST00000569945 CFHR3Q02985 330 aa10.21□□□□□ -0.77
GCOM1-213ENST00000569945 KRTAP24-1Q3LI83 254 aa10.21□□□□□ -0.77
GCOM1-213ENST00000569945 RPL11P62913 178 aaKnown RBP10.21□□□□□ -0.78
GCOM1-213ENST00000569945 CLEC19AQ6UXS0 136 aa10.21□□□□□ -0.78
GCOM1-213ENST00000569945 FAM110DQ8TAY7 271 aaPredicted RBP10.21□□□□□ -0.78
GCOM1-213ENST00000569945 SOCS3O14543 225 aa10.2□□□□□ -0.78
GCOM1-213ENST00000569945 Q6JHZ5 121 aa10.2□□□□□ -0.78
GCOM1-213ENST00000569945 C11orf44Q8N8P7 122 aa10.2□□□□□ -0.78
GCOM1-213ENST00000569945 LINC01561Q8N1V8 128 aa10.19□□□□□ -0.78
GCOM1-213ENST00000569945 C16orf95Q9H693 158 aa10.19□□□□□ -0.78
GCOM1-213ENST00000569945 MALP21145 153 aa10.19□□□□□ -0.78
GCOM1-213ENST00000569945 KRTAP10-3P60369 221 aa10.19□□□□□ -0.78
GCOM1-213ENST00000569945 FAM218AQ96MZ4 157 aa10.18□□□□□ -0.78
GCOM1-213ENST00000569945 NACAE9PAV3 2078 aa10.18□□□□□ -0.78
GCOM1-213ENST00000569945 PRO0628Q9UI54 55 aa10.18□□□□□ -0.78
GCOM1-213ENST00000569945 EPM2AB3EWF7 344 aa10.17□□□□□ -0.78
GCOM1-213ENST00000569945 USP17L23D6RBM5 183 aa10.17□□□□□ -0.78
GCOM1-213ENST00000569945 IGLV1-40P01703 118 aa10.17□□□□□ -0.78
GCOM1-213ENST00000569945 A0A087WVE0 104 aa10.17□□□□□ -0.78
GCOM1-213ENST00000569945 PROK1P58294 105 aa10.17□□□□□ -0.78
GCOM1-213ENST00000569945 FHL2Q14192 279 aa10.17□□□□□ -0.78
GCOM1-213ENST00000569945 LINC00308Q8TCZ7 52 aa10.17□□□□□ -0.78
GCOM1-213ENST00000569945 IGKV3D-7A0A0C4DH55 119 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 TINCRA0A1B0GVN0 87 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 F6UB75 175 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 F8WDY8 70 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 RS1O15537 224 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 SYNJ2BPP57105 145 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 C18orf65Q6ZTR6 163 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 COL6A5A8TX70 2615 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 CD28P10747 220 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 PSMB8P28062 276 aa10.16□□□□□ -0.78
GCOM1-213ENST00000569945 KLLNB2CW77 178 aa10.15□□□□□ -0.78
GCOM1-213ENST00000569945 IGHV3-11P01762 117 aa10.15□□□□□ -0.78
GCOM1-213ENST00000569945 NDUFA1O15239 70 aa10.15□□□□□ -0.79
GCOM1-213ENST00000569945 PFN2P35080 140 aa10.15□□□□□ -0.79
GCOM1-213ENST00000569945 LINC00336Q6ZUF6 198 aa10.14□□□□□ -0.79
GCOM1-213ENST00000569945 C9orf85Q96MD7 179 aa10.13□□□□□ -0.79
GCOM1-213ENST00000569945 LINC00846Q9NV44 126 aa10.13□□□□□ -0.79
GCOM1-213ENST00000569945 STAB1Q9NY15 2570 aa10.13□□□□□ -0.79
GCOM1-213ENST00000569945 ZNF415Q09FC8 603 aa10.13□□□□□ -0.79
GCOM1-213ENST00000569945 SOSTDC1Q6X4U4 206 aa10.13□□□□□ -0.79
GCOM1-213ENST00000569945 TMEM89A2RUT3 159 aa10.12□□□□□ -0.79
GCOM1-213ENST00000569945 C9orf129Q5T035 196 aaKnown RBP10.12□□□□□ -0.79
GCOM1-213ENST00000569945 FAM223BA6NKX1 122 aa10.12□□□□□ -0.79
GCOM1-213ENST00000569945 NDUFC2O95298 119 aa10.12□□□□□ -0.79
GCOM1-213ENST00000569945 TRBV12-3P01733 135 aa10.12□□□□□ -0.79
GCOM1-213ENST00000569945 RNASE13Q5GAN3 156 aaKnown RBP10.12□□□□□ -0.79
GCOM1-213ENST00000569945 OBSCN-AS1Q96MR7 158 aa10.12□□□□□ -0.79
GCOM1-213ENST00000569945 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
GCOM1-213ENST00000569945 A0A1W2PRX2 142 aa10.11□□□□□ -0.79
GCOM1-213ENST00000569945 DNAL4O96015 105 aa10.11□□□□□ -0.79
GCOM1-213ENST00000569945 TRRAPQ9Y4A5 3859 aa10.11□□□□□ -0.79
GCOM1-213ENST00000569945 KHDC1LQ5JSQ8 128 aa10.11□□□□□ -0.79
GCOM1-213ENST00000569945 Q9HAA7 133 aa10.11□□□□□ -0.79
GCOM1-213ENST00000569945 IGHV3-16A0A0C4DH30 117 aa10.1□□□□□ -0.79
GCOM1-213ENST00000569945 DEFB136Q30KP8 78 aa10.1□□□□□ -0.79
GCOM1-213ENST00000569945 H3BUA1 57 aa10.1□□□□□ -0.79
GCOM1-213ENST00000569945 CIRBPQ14011 172 aaKnown RBP10.1□□□□□ -0.79
GCOM1-213ENST00000569945 MDFIQ99750 246 aa10.1□□□□□ -0.79
GCOM1-213ENST00000569945 FAM223AQ8IWN6 122 aa10.09□□□□□ -0.79
GCOM1-213ENST00000569945 C14orf132Q9NPU4 83 aa10.08□□□□□ -0.8
GCOM1-213ENST00000569945 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
GCOM1-213ENST00000569945 UNQ9165/PRO28630Q6UXU0 137 aa10.08□□□□□ -0.8
GCOM1-213ENST00000569945 CDKN2A-AS1Q9UH64 79 aa10.08□□□□□ -0.8
GCOM1-213ENST00000569945 WNK1Q9H4A3 2382 aa10.08□□□□□ -0.8
GCOM1-213ENST00000569945 VWFP04275 2813 aa10.07□□□□□ -0.8
GCOM1-213ENST00000569945 USMG5Q96IX5 58 aa10.06□□□□□ -0.8
GCOM1-213ENST00000569945 UBE2E2Q96LR5 201 aa10.06□□□□□ -0.8
GCOM1-213ENST00000569945 TRAV12-2A0A075B6T6 113 aa10.06□□□□□ -0.8
GCOM1-213ENST00000569945 FAM236DA0A1B0GTK5 79 aa10.06□□□□□ -0.8
GCOM1-213ENST00000569945 FAM236CP0DP71 79 aa10.06□□□□□ -0.8
GCOM1-213ENST00000569945 RPL28P46779 137 aaKnown RBP10.06□□□□□ -0.8
GCOM1-213ENST00000569945 C1orf43Q9BWL3 253 aa10.06□□□□□ -0.8
GCOM1-213ENST00000569945 Q9H8V8 135 aa10.06□□□□□ -0.8
GCOM1-213ENST00000569945 IGLV5-39A0A0G2JS06 123 aa10.05□□□□□ -0.8
GCOM1-213ENST00000569945 SERP1Q9Y6X1 66 aa10.05□□□□□ -0.8
GCOM1-213ENST00000569945 RPL35AP18077 110 aaKnown RBP10.05□□□□□ -0.8
GCOM1-213ENST00000569945 HOXD3P31249 432 aaPredicted RBP10.05□□□□□ -0.8
GCOM1-213ENST00000569945 COPS9Q8WXC6 57 aa10.05□□□□□ -0.8
GCOM1-213ENST00000569945 TMEM243Q9BU79 118 aa10.05□□□□□ -0.8
GCOM1-213ENST00000569945 CHCHD7Q9BUK0 85 aa10.04□□□□□ -0.8
GCOM1-213ENST00000569945 ANK2Q01484 3957 aa10.04□□□□□ -0.8
GCOM1-213ENST00000569945 A0A0U1RRA0 63 aa10.04□□□□□ -0.8
GCOM1-213ENST00000569945 GHRHP01286 108 aa10.04□□□□□ -0.8
GCOM1-213ENST00000569945 C4orf3Q8WVX3 66 aa10.03□□□□□ -0.8
GCOM1-213ENST00000569945 ZNF625Q96I27 306 aaPredicted RBP10.03□□□□□ -0.8
GCOM1-213ENST00000569945 SLURP1P55000 103 aa10.02□□□□□ -0.8
GCOM1-213ENST00000569945 SPATA3Q8NHX4 192 aa10.02□□□□□ -0.8
GCOM1-213ENST00000569945 A0A087WYN8 130 aa10.02□□□□□ -0.81
GCOM1-213ENST00000569945 EDN2P20800 178 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms