RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 SNAI2O43623 268 aa3.49□□□□□ -1.85
UBFD1-209ENST00000569919 SIX6O95475 246 aa3.49□□□□□ -1.85
UBFD1-209ENST00000569919 PET100P0DJ07 73 aa3.49□□□□□ -1.85
UBFD1-209ENST00000569919 IL7P13232 177 aa3.49□□□□□ -1.85
UBFD1-209ENST00000569919 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
UBFD1-209ENST00000569919 UBE2G1P62253 170 aa3.49□□□□□ -1.85
UBFD1-209ENST00000569919 SERF2P84101 59 aa3.49□□□□□ -1.85
UBFD1-209ENST00000569919 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
UBFD1-209ENST00000569919 AMMECR1LQ6DCA0 310 aa3.49□□□□□ -1.85
UBFD1-209ENST00000569919 PHF5AQ7RTV0 110 aaKnown RBP3.49□□□□□ -1.85
UBFD1-209ENST00000569919 ACTR3CQ9C0K3 210 aaPredicted RBP3.49□□□□□ -1.85
UBFD1-209ENST00000569919 NIT2Q9NQR4 276 aa3.49□□□□□ -1.85
UBFD1-209ENST00000569919 IGLV4-69A0A075B6H9 119 aa3.48□□□□□ -1.85
UBFD1-209ENST00000569919 NKX2-5P52952 324 aaPredicted RBP3.48□□□□□ -1.85
UBFD1-209ENST00000569919 RASL11AQ6T310 242 aa3.48□□□□□ -1.85
UBFD1-209ENST00000569919 PPP1R1CQ8WVI7 109 aa3.48□□□□□ -1.85
UBFD1-209ENST00000569919 LINC00526Q96FQ7 95 aa3.48□□□□□ -1.85
UBFD1-209ENST00000569919 AP1S3Q96PC3 154 aa3.48□□□□□ -1.85
UBFD1-209ENST00000569919 HIST1H4GQ99525 98 aa3.48□□□□□ -1.85
UBFD1-209ENST00000569919 WFDC1Q9HC57 220 aa3.48□□□□□ -1.85
UBFD1-209ENST00000569919 TNFSF18Q9UNG2 199 aa3.48□□□□□ -1.85
UBFD1-209ENST00000569919 MUC21A0A140T8X8 626 aa3.47□□□□□ -1.85
UBFD1-209ENST00000569919 APOMO95445 188 aa3.47□□□□□ -1.85
UBFD1-209ENST00000569919 MPC2O95563 127 aa3.47□□□□□ -1.85
UBFD1-209ENST00000569919 LTAP01374 205 aa3.47□□□□□ -1.85
UBFD1-209ENST00000569919 MGPP08493 103 aa3.47□□□□□ -1.85
UBFD1-209ENST00000569919 ATP6V0CP27449 155 aa3.47□□□□□ -1.85
UBFD1-209ENST00000569919 XCL1P47992 114 aa3.47□□□□□ -1.85
UBFD1-209ENST00000569919 SS18Q15532 418 aa3.47□□□□□ -1.85
UBFD1-209ENST00000569919 EIF5AL1Q6IS14 154 aaKnown RBP3.47□□□□□ -1.85
UBFD1-209ENST00000569919 NUP35Q8NFH5 326 aa3.47□□□□□ -1.85
UBFD1-209ENST00000569919 OR5A1Q8NGJ0 315 aa3.47□□□□□ -1.85
UBFD1-209ENST00000569919 PSMG3Q9BT73 122 aaPredicted RBP3.47□□□□□ -1.85
UBFD1-209ENST00000569919 LINC00959A0A1B0GUT2 108 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 CCDC160A6NGH7 325 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 CCL25O15444 150 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 BCL2P10415 239 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 ZNF25P17030 456 aaPredicted RBP3.46□□□□□ -1.86
UBFD1-209ENST00000569919 UBE2G2P60604 165 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 TPRXLQ17RH7 258 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 TMEM101Q96IK0 257 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 BTF3L4Q96K17 158 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 CAMK2N2Q96S95 79 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 TCEAL7Q9BRU2 100 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 CCDC32Q9BV29 185 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 MAP1LC3CQ9BXW4 147 aa3.46□□□□□ -1.86
UBFD1-209ENST00000569919 A0A1B0GW15 77 aa3.45□□□□□ -1.86
UBFD1-209ENST00000569919 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.45□□□□□ -1.86
UBFD1-209ENST00000569919 NCR2O95944 276 aa3.45□□□□□ -1.86
UBFD1-209ENST00000569919 CRYGAP11844 174 aa3.45□□□□□ -1.86
UBFD1-209ENST00000569919 PMCHP20382 165 aa3.45□□□□□ -1.86
UBFD1-209ENST00000569919 DEFA3P59666 94 aa3.45□□□□□ -1.86
UBFD1-209ENST00000569919 MEF2BQ02080 365 aaPredicted RBP3.45□□□□□ -1.86
UBFD1-209ENST00000569919 RPL18AQ02543 176 aaKnown RBP3.45□□□□□ -1.86
UBFD1-209ENST00000569919 Q6ZN92 141 aa3.45□□□□□ -1.86
UBFD1-209ENST00000569919 NKAPP1Q8N9T2 125 aa3.45□□□□□ -1.86
UBFD1-209ENST00000569919 RPP21Q9H633 154 aaKnown RBP3.45□□□□□ -1.86
UBFD1-209ENST00000569919 CTXND1A0A1B0GTU2 59 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 C19orf71A6NCJ1 209 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 A8MU10 97 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 HSBP1O75506 76 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 TRGC1P0CF51 173 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 ESDP10768 282 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 NTF3P20783 257 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 H2BFSP57053 126 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 KRTAP11-1Q8IUC1 163 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 STOML3Q8TAV4 291 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 IMMP2LQ96T52 175 aa3.44□□□□□ -1.86
UBFD1-209ENST00000569919 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.43□□□□□ -1.86
UBFD1-209ENST00000569919 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
UBFD1-209ENST00000569919 C1orf196B1AJZ1 125 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 F2Z2F3 143 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 ZNF861PO60384 105 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 AKR1C3P42330 323 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 RPS20P60866 119 aaKnown RBP3.43□□□□□ -1.86
UBFD1-209ENST00000569919 UBE2BP63146 152 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 TMEM241Q24JQ0 296 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 RGS21Q2M5E4 152 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 C5orf47Q569G3 176 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 BAGE2Q86Y30 109 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 OR2D3Q8NGH3 330 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 FSIP2Q5CZC0 6907 aa3.43□□□□□ -1.86
UBFD1-209ENST00000569919 COX7A2LO14548 114 aa3.42□□□□□ -1.86
UBFD1-209ENST00000569919 APCSP02743 223 aa3.42□□□□□ -1.86
UBFD1-209ENST00000569919 ZNF726P1Q15940 193 aa3.42□□□□□ -1.86
UBFD1-209ENST00000569919 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
UBFD1-209ENST00000569919 RETNLBQ9BQ08 111 aa3.42□□□□□ -1.86
UBFD1-209ENST00000569919 CDC42SE2Q9NRR3 84 aa3.42□□□□□ -1.86
UBFD1-209ENST00000569919 INMT-MINDY4F8WBC2 141 aa3.41□□□□□ -1.86
UBFD1-209ENST00000569919 G3V3Q6 166 aa3.41□□□□□ -1.86
UBFD1-209ENST00000569919 SMLR1H3BR10 107 aa3.41□□□□□ -1.86
UBFD1-209ENST00000569919 IGLC6P0CF74 106 aa3.41□□□□□ -1.86
UBFD1-209ENST00000569919 TEX261Q6UWH6 196 aa3.41□□□□□ -1.86
UBFD1-209ENST00000569919 LINC00173Q6ZV60 143 aa3.41□□□□□ -1.86
UBFD1-209ENST00000569919 FAM19A5Q7Z5A7 132 aaPredicted RBP3.41□□□□□ -1.86
UBFD1-209ENST00000569919 MRPL35Q9NZE8 188 aaKnown RBP3.41□□□□□ -1.86
UBFD1-209ENST00000569919 BORCS7-ASMTA0A0B4J1R7 106 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 I3L3M4 83 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 M0QXV9 152 aa3.4□□□□□ -1.87
UBFD1-209ENST00000569919 SSNA1O43805 119 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms