RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SACSQ9NZJ4 4579 aa3.22□□□□□ -1.89
CNOT1-219ENST00000569882 PLECQ15149 4684 aaKnown RBP3.21□□□□□ -1.9
CNOT1-219ENST00000569882 NCR2O95944 276 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 OXTP01178 125 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 ESDP10768 282 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 CKS2P33552 79 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 RPL13AP40429 203 aaKnown RBP3.21□□□□□ -1.9
CNOT1-219ENST00000569882 XGP55808 180 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-219ENST00000569882 HBBP68871 147 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 PNRC1Q12796 327 aaPredicted RBP3.21□□□□□ -1.9
CNOT1-219ENST00000569882 MRPL54Q6P161 138 aaKnown RBP3.21□□□□□ -1.9
CNOT1-219ENST00000569882 AMN1Q8IY45 258 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 NUP35Q8NFH5 326 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 OR5A1Q8NGJ0 315 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 TMEM18Q96B42 140 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 DPH3Q96FX2 82 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 TMEM191AQ9H0A3 160 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 PRO1933Q9H354 126 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 V9GYV3 84 aa3.21□□□□□ -1.9
CNOT1-219ENST00000569882 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-219ENST00000569882 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-219ENST00000569882 TRAV8-4A0A0B4J246 113 aa3.2□□□□□ -1.9
CNOT1-219ENST00000569882 hDV102S1A0JD36 115 aa3.2□□□□□ -1.9
CNOT1-219ENST00000569882 IGKV2-29A2NJV5 120 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-219ENST00000569882 C7orf77A4D0Y5 90 aa3.2□□□□□ -1.9
CNOT1-219ENST00000569882 RAB5AP20339 215 aa3.2□□□□□ -1.9
CNOT1-219ENST00000569882 FOXA3P55318 350 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-219ENST00000569882 RPS28P62857 69 aaKnown RBP3.2□□□□□ -1.9
CNOT1-219ENST00000569882 JOSD1Q15040 202 aaPredicted RBP3.2□□□□□ -1.9
CNOT1-219ENST00000569882 RHEBQ15382 184 aa3.2□□□□□ -1.9
CNOT1-219ENST00000569882 C4orf26Q17RF5 130 aa3.2□□□□□ -1.9
CNOT1-219ENST00000569882 NTM-AS1Q6ZSK4 140 aa3.2□□□□□ -1.9
CNOT1-219ENST00000569882 ZNF664Q8N3J9 261 aa3.2□□□□□ -1.9
CNOT1-219ENST00000569882 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
CNOT1-219ENST00000569882 DNAH1Q9P2D7 4330 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 IGLV4-60A0A075B6I1 120 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 A0A1B0GUV1 79 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 A0A1B0GX51 115 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 SMIM27A0A1W2PRY6 76 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 LRCOL1A6NCL2 159 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 COLCA2A8K830 154 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 EPM2AB3EWF7 344 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 SMKR1H3BMG3 65 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 H7C423 109 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 VCYO14598 125 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 APOC3P02656 99 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 FGF6P10767 208 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 SUMO2P61956 95 aaKnown RBP3.19□□□□□ -1.9
CNOT1-219ENST00000569882 CD164Q04900 197 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 SS18Q15532 418 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 ENHOQ6UWT2 76 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 SVBPQ8N300 66 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 TMEM70Q9BUB7 260 aa3.19□□□□□ -1.9
CNOT1-219ENST00000569882 FRAS1Q86XX4 4008 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 TRBV6-5A0A0K0K1A5 114 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 C9JQL5 133 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 D6R8Y8 96 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 TRIAP1O43715 76 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 XCL1P47992 114 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 KRTAP10-1P60331 282 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 HAMPP81172 84 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 WFDC2Q14508 124 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 PMVKQ15126 192 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 MRPL51Q4U2R6 128 aaKnown RBP3.18□□□□□ -1.9
CNOT1-219ENST00000569882 C10orf91Q5T1B1 145 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 FAM104BQ5XKR9 115 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 ATP5L2Q7Z4Y8 100 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 ORMDL3Q8N138 153 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 LAMTOR2Q9Y2Q5 125 aa3.18□□□□□ -1.9
CNOT1-219ENST00000569882 CARHSP1Q9Y2V2 147 aaKnown RBP3.18□□□□□ -1.9
CNOT1-219ENST00000569882 TRBV27A0A0K0K1C4 114 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 LOC389332A0A1B0GUA5 103 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 IFITM10A6NMD0 228 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 TSHBP01222 138 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 SMR3BP02814 79 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-219ENST00000569882 IFI27P40305 119 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-219ENST00000569882 RPS10P46783 165 aaKnown RBP3.17□□□□□ -1.9
CNOT1-219ENST00000569882 HIGD2BQ4VC39 106 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 C1orf195Q5TG92 126 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 Q6ZN92 141 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 C20orf203Q8NBC4 194 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 CHCHD10Q8WYQ3 142 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-219ENST00000569882 RNF185Q96GF1 192 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 PRELID3AQ96N28 172 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 C20orf78Q9BR46 151 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 PRR34Q9NV39 138 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 PKIGQ9Y2B9 76 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 DNAH6Q9C0G6 4158 aa3.17□□□□□ -1.9
CNOT1-219ENST00000569882 EPPK1P58107 5090 aaKnown RBP3.16□□□□□ -1.9
CNOT1-219ENST00000569882 IGHV3-64A0A075B6Q5 118 aa3.16□□□□□ -1.9
CNOT1-219ENST00000569882 TRAV13-1A0A0B4J241 112 aa3.16□□□□□ -1.9
CNOT1-219ENST00000569882 J3KT08 172 aa3.16□□□□□ -1.9
CNOT1-219ENST00000569882 PHOX2AO14813 284 aa3.16□□□□□ -1.9
CNOT1-219ENST00000569882 APOMO95445 188 aa3.16□□□□□ -1.9
CNOT1-219ENST00000569882 RNASE13Q5GAN3 156 aaKnown RBP3.16□□□□□ -1.9
CNOT1-219ENST00000569882 Q5VSD8 79 aa3.16□□□□□ -1.9
CNOT1-219ENST00000569882 TMEM136Q6ZRR5 245 aa3.16□□□□□ -1.9
CNOT1-219ENST00000569882 Q8N9P0 234 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms