RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 IGLC3P0DOY3 106 aa15.55■□□□□ 0.08
RAB40C-212ENST00000569575 SNRPEP62304 92 aaKnown RBP15.55■□□□□ 0.08
RAB40C-212ENST00000569575 CHTOPQ9Y3Y2 248 aaKnown RBP15.55■□□□□ 0.08
RAB40C-212ENST00000569575 IGLV5-45A0A087WSX0 123 aa15.54■□□□□ 0.08
RAB40C-212ENST00000569575 F8VRH5 84 aa15.54■□□□□ 0.08
RAB40C-212ENST00000569575 AKR1D1P51857 326 aa15.54■□□□□ 0.08
RAB40C-212ENST00000569575 ZC2HC1BQ5TFG8 222 aa15.54■□□□□ 0.08
RAB40C-212ENST00000569575 A0A087WZ39 114 aa15.53■□□□□ 0.08
RAB40C-212ENST00000569575 PET117Q6UWS5 81 aa15.53■□□□□ 0.08
RAB40C-212ENST00000569575 MAPKAPK5-AS1Q8N8E1 139 aa15.53■□□□□ 0.08
RAB40C-212ENST00000569575 A0A0J9YXV3 536 aa15.52■□□□□ 0.08
RAB40C-212ENST00000569575 LRCOL1A6NCL2 159 aa15.52■□□□□ 0.08
RAB40C-212ENST00000569575 SYS1-DBNDD2H3BUS1 97 aa15.52■□□□□ 0.08
RAB40C-212ENST00000569575 MALP21145 153 aa15.52■□□□□ 0.08
RAB40C-212ENST00000569575 SACSQ9NZJ4 4579 aa15.52■□□□□ 0.07
RAB40C-212ENST00000569575 IGHV1-58A0A0C4DH39 117 aa15.51■□□□□ 0.07
RAB40C-212ENST00000569575 HIST1H2BLQ99880 126 aa15.51■□□□□ 0.07
RAB40C-212ENST00000569575 A0A087WTM6 91 aa15.5■□□□□ 0.07
RAB40C-212ENST00000569575 H3BRM9 83 aa15.5■□□□□ 0.07
RAB40C-212ENST00000569575 ODF1Q14990 250 aa15.5■□□□□ 0.07
RAB40C-212ENST00000569575 KMT2CQ8NEZ4 4911 aaKnown RBP15.49■□□□□ 0.07
RAB40C-212ENST00000569575 IGLV4-69A0A075B6H9 119 aa15.49■□□□□ 0.07
RAB40C-212ENST00000569575 PLNP26678 52 aa15.49■□□□□ 0.07
RAB40C-212ENST00000569575 COX6A2Q02221 97 aa15.49■□□□□ 0.07
RAB40C-212ENST00000569575 CHAC1Q9BUX1 264 aa15.49■□□□□ 0.07
RAB40C-212ENST00000569575 OR10D4PQ8NGN7 298 aa15.48■□□□□ 0.07
RAB40C-212ENST00000569575 USP17L23D6RBM5 183 aa15.47■□□□□ 0.07
RAB40C-212ENST00000569575 F8WDY8 70 aa15.47■□□□□ 0.07
RAB40C-212ENST00000569575 TNP2Q05952 138 aa15.47■□□□□ 0.07
RAB40C-212ENST00000569575 C5orf38Q86SI9 138 aa15.47■□□□□ 0.07
RAB40C-212ENST00000569575 LINC00469Q8N7U9 141 aa15.47■□□□□ 0.07
RAB40C-212ENST00000569575 MRPL35Q9NZE8 188 aaKnown RBP15.47■□□□□ 0.07
RAB40C-212ENST00000569575 C20orf202A1L168 122 aa15.46■□□□□ 0.07
RAB40C-212ENST00000569575 C3orf79P0CE67 100 aa15.46■□□□□ 0.07
RAB40C-212ENST00000569575 CDKN2A-AS1Q9UH64 79 aa15.46■□□□□ 0.07
RAB40C-212ENST00000569575 IGHV3-64A0A075B6Q5 118 aa15.45■□□□□ 0.06
RAB40C-212ENST00000569575 GVQW2A0A096LPI5 108 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-212ENST00000569575 DPM2O94777 84 aa15.45■□□□□ 0.06
RAB40C-212ENST00000569575 LINC01545Q5VT33 79 aa15.45■□□□□ 0.06
RAB40C-212ENST00000569575 NTN5Q8WTR8 489 aaPredicted RBP15.45■□□□□ 0.06
RAB40C-212ENST00000569575 H0Y8G0 127 aa15.44■□□□□ 0.06
RAB40C-212ENST00000569575 KRTDAPP60985 99 aa15.44■□□□□ 0.06
RAB40C-212ENST00000569575 Q8N814 137 aa15.44■□□□□ 0.06
RAB40C-212ENST00000569575 C11orf86A6NJI1 115 aa15.43■□□□□ 0.06
RAB40C-212ENST00000569575 C15orf56Q8N910 161 aa15.43■□□□□ 0.06
RAB40C-212ENST00000569575 ZNF561-AS1K7EIQ3 104 aa15.42■□□□□ 0.06
RAB40C-212ENST00000569575 PGPEP1Q9NXJ5 209 aa15.42■□□□□ 0.06
RAB40C-212ENST00000569575 IGKCP01834 107 aa15.41■□□□□ 0.06
RAB40C-212ENST00000569575 ZNF22P17026 224 aaPredicted RBP15.41■□□□□ 0.06
RAB40C-212ENST00000569575 TMEM170BQ5T4T1 132 aa15.41■□□□□ 0.06
RAB40C-212ENST00000569575 CDPF1Q6NVV7 123 aa15.41■□□□□ 0.06
RAB40C-212ENST00000569575 TMA7Q9Y2S6 64 aaKnown RBP15.41■□□□□ 0.06
RAB40C-212ENST00000569575 C2orf48Q96LS8 159 aa15.4■□□□□ 0.06
RAB40C-212ENST00000569575 hDV102S1A0JD36 115 aa15.39■□□□□ 0.05
RAB40C-212ENST00000569575 ORAOV1Q8WV07 137 aa15.39■□□□□ 0.05
RAB40C-212ENST00000569575 Q8IZM0 81 aa15.38■□□□□ 0.05
RAB40C-212ENST00000569575 HYDINQ4G0P3 5121 aa15.37■□□□□ 0.05
RAB40C-212ENST00000569575 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.37■□□□□ 0.05
RAB40C-212ENST00000569575 SMIM1B2RUZ4 78 aa15.37■□□□□ 0.05
RAB40C-212ENST00000569575 LECT2O14960 151 aa15.37■□□□□ 0.05
RAB40C-212ENST00000569575 CNBPP62633 177 aaKnown RBP15.37■□□□□ 0.05
RAB40C-212ENST00000569575 WFDC2Q14508 124 aa15.37■□□□□ 0.05
RAB40C-212ENST00000569575 RYR2Q92736 4967 aa15.37■□□□□ 0.05
RAB40C-212ENST00000569575 PRSS2P07478 247 aa15.36■□□□□ 0.05
RAB40C-212ENST00000569575 IGLV5-39A0A0G2JS06 123 aa15.35■□□□□ 0.05
RAB40C-212ENST00000569575 TMEM223A0PJW6 202 aa15.35■□□□□ 0.05
RAB40C-212ENST00000569575 CXCL5P42830 114 aa15.35■□□□□ 0.05
RAB40C-212ENST00000569575 HERVK_113P61574 105 aa15.35■□□□□ 0.05
RAB40C-212ENST00000569575 SPAG11BQ08648 103 aa15.35■□□□□ 0.05
RAB40C-212ENST00000569575 SFTA2Q6UW10 78 aa15.35■□□□□ 0.05
RAB40C-212ENST00000569575 PKIGQ9Y2B9 76 aa15.34■□□□□ 0.05
RAB40C-212ENST00000569575 C6orf226Q5I0X4 101 aa15.33■□□□□ 0.04
RAB40C-212ENST00000569575 A0A1B0GVY2 172 aa15.32■□□□□ 0.04
RAB40C-212ENST00000569575 SPINK8P0C7L1 97 aa15.32■□□□□ 0.04
RAB40C-212ENST00000569575 KIAA0087Q14695 138 aa15.32■□□□□ 0.04
RAB40C-212ENST00000569575 HIGD2BQ4VC39 106 aa15.32■□□□□ 0.04
RAB40C-212ENST00000569575 COX7B2Q8TF08 81 aa15.31■□□□□ 0.04
RAB40C-212ENST00000569575 PMCHL2Q9BQD1 86 aa15.31■□□□□ 0.04
RAB40C-212ENST00000569575 NDUFA1O15239 70 aa15.3■□□□□ 0.04
RAB40C-212ENST00000569575 CKS1BP61024 79 aa15.3■□□□□ 0.04
RAB40C-212ENST00000569575 SYCNQ0VAF6 134 aa15.3■□□□□ 0.04
RAB40C-212ENST00000569575 RNF151Q2KHN1 245 aa15.3■□□□□ 0.04
RAB40C-212ENST00000569575 CAMK2N2Q96S95 79 aa15.29■□□□□ 0.04
RAB40C-212ENST00000569575 IGLV5-52A0A0A0MRZ9 124 aa15.28■□□□□ 0.04
RAB40C-212ENST00000569575 PLEKHB2Q96CS7 222 aa15.28■□□□□ 0.04
RAB40C-212ENST00000569575 TOMM7Q9P0U1 55 aa15.28■□□□□ 0.04
RAB40C-212ENST00000569575 DNAH2Q9P225 4427 aa15.27■□□□□ 0.04
RAB40C-212ENST00000569575 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.27■□□□□ 0.04
RAB40C-212ENST00000569575 C9orf163Q8N9P6 203 aa15.27■□□□□ 0.04
RAB40C-212ENST00000569575 TRBV30A0A0K0K1B3 111 aa15.26■□□□□ 0.03
RAB40C-212ENST00000569575 CARD19Q96LW7 228 aa15.26■□□□□ 0.03
RAB40C-212ENST00000569575 E9PLD3 99 aa15.25■□□□□ 0.03
RAB40C-212ENST00000569575 LEPROTO15243 131 aa15.25■□□□□ 0.03
RAB40C-212ENST00000569575 SCGB1D1O95968 90 aa15.24■□□□□ 0.03
RAB40C-212ENST00000569575 SLPIP03973 132 aa15.24■□□□□ 0.03
RAB40C-212ENST00000569575 DNAH17Q9UFH2 4485 aa15.23■□□□□ 0.03
RAB40C-212ENST00000569575 KRTAP10-2P60368 255 aa15.23■□□□□ 0.03
RAB40C-212ENST00000569575 JOSD1Q15040 202 aaPredicted RBP15.23■□□□□ 0.03
RAB40C-212ENST00000569575 NMUP48645 174 aa15.22■□□□□ 0.03
RAB40C-212ENST00000569575 HSBP1L1C9JCN9 74 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms