RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 Q8N814 137 aa6.21□□□□□ -1.42
UBR1-210ENST00000569337 NTN5Q8WTR8 489 aaPredicted RBP6.21□□□□□ -1.42
UBR1-210ENST00000569337 TMA7Q9Y2S6 64 aaKnown RBP6.21□□□□□ -1.42
UBR1-210ENST00000569337 TRAV13-1A0A0B4J241 112 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 LINC01549A6NIU2 74 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.2□□□□□ -1.42
UBR1-210ENST00000569337 ATP5LO75964 103 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 LEPROTL1O95214 131 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 CRPP02741 224 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 S100A6P06703 90 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 KRTAP10-1P60331 282 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 MIAQ16674 131 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 TEX43Q6ZNM6 134 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 IFI27L1Q96BM0 104 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 VCX2Q9H322 139 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 CST9LQ9H4G1 147 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 DNAH5Q8TE73 4624 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 PCLOQ9Y6V0 5065 aa6.2□□□□□ -1.42
UBR1-210ENST00000569337 LECT2O14960 151 aa6.19□□□□□ -1.42
UBR1-210ENST00000569337 UBE2D1P51668 147 aa6.19□□□□□ -1.42
UBR1-210ENST00000569337 COX6A2Q02221 97 aa6.19□□□□□ -1.42
UBR1-210ENST00000569337 PMVKQ15126 192 aa6.19□□□□□ -1.42
UBR1-210ENST00000569337 CHCHD10Q8WYQ3 142 aaPredicted RBP6.19□□□□□ -1.42
UBR1-210ENST00000569337 KRTAP17-1Q9BYP8 105 aa6.19□□□□□ -1.42
UBR1-210ENST00000569337 HSPG2P98160 4391 aa6.18□□□□□ -1.42
UBR1-210ENST00000569337 CCL25O15444 150 aa6.18□□□□□ -1.42
UBR1-210ENST00000569337 WFDC2Q14508 124 aa6.18□□□□□ -1.42
UBR1-210ENST00000569337 LINC00242Q5T6M2 205 aa6.18□□□□□ -1.42
UBR1-210ENST00000569337 Q6ZN92 141 aa6.18□□□□□ -1.42
UBR1-210ENST00000569337 Q8N1X5 172 aa6.18□□□□□ -1.42
UBR1-210ENST00000569337 HIST1H2BLQ99880 126 aa6.18□□□□□ -1.42
UBR1-210ENST00000569337 C1orf43Q9BWL3 253 aa6.18□□□□□ -1.42
UBR1-210ENST00000569337 KRTAP4-5Q9BYR2 181 aa6.18□□□□□ -1.42
UBR1-210ENST00000569337 IGLV4-69A0A075B6H9 119 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 TRAV8-4A0A0B4J246 113 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 A0A0J9YXV3 536 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 PRSS1P07477 247 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 XCL1P47992 114 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 XGP55808 180 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 FOXI1Q12951 378 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 PAPPA-AS1Q5QFB9 102 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 FAM19A3Q7Z5A8 133 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 PACRGQ96M98 296 aaPredicted RBP6.17□□□□□ -1.42
UBR1-210ENST00000569337 HSPB8Q9UJY1 196 aa6.17□□□□□ -1.42
UBR1-210ENST00000569337 APOBP04114 4563 aaKnown RBP6.16□□□□□ -1.42
UBR1-210ENST00000569337 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.16□□□□□ -1.42
UBR1-210ENST00000569337 H0Y8G0 127 aa6.16□□□□□ -1.42
UBR1-210ENST00000569337 C3orf79P0CE67 100 aa6.16□□□□□ -1.42
UBR1-210ENST00000569337 SS18Q15532 418 aa6.16□□□□□ -1.42
UBR1-210ENST00000569337 C2orf88Q9BSF0 95 aa6.16□□□□□ -1.42
UBR1-210ENST00000569337 TRAV12-1A0A0B4J245 112 aa6.15□□□□□ -1.42
UBR1-210ENST00000569337 IGHV3OR16-9A0A0B4J2B5 98 aa6.15□□□□□ -1.42
UBR1-210ENST00000569337 SYS1-DBNDD2H3BUS1 97 aa6.15□□□□□ -1.42
UBR1-210ENST00000569337 IGLC3P0DOY3 106 aa6.15□□□□□ -1.42
UBR1-210ENST00000569337 ODF1Q14990 250 aa6.15□□□□□ -1.42
UBR1-210ENST00000569337 CD164L2Q6UWJ8 174 aa6.15□□□□□ -1.42
UBR1-210ENST00000569337 PMCHL2Q9BQD1 86 aa6.15□□□□□ -1.42
UBR1-210ENST00000569337 MRPL35Q9NZE8 188 aaKnown RBP6.15□□□□□ -1.42
UBR1-210ENST00000569337 TINCRA0A1B0GVN0 87 aa6.14□□□□□ -1.43
UBR1-210ENST00000569337 C11orf86A6NJI1 115 aa6.14□□□□□ -1.43
UBR1-210ENST00000569337 EPM2AB3EWF7 344 aa6.14□□□□□ -1.43
UBR1-210ENST00000569337 S100A2P29034 98 aa6.14□□□□□ -1.43
UBR1-210ENST00000569337 C14orf177Q52M58 125 aa6.14□□□□□ -1.43
UBR1-210ENST00000569337 C5orf38Q86SI9 138 aa6.14□□□□□ -1.43
UBR1-210ENST00000569337 MAP1LC3CQ9BXW4 147 aa6.14□□□□□ -1.43
UBR1-210ENST00000569337 CDKN2A-AS1Q9UH64 79 aa6.14□□□□□ -1.43
UBR1-210ENST00000569337 CHTOPQ9Y3Y2 248 aaKnown RBP6.14□□□□□ -1.43
UBR1-210ENST00000569337 ABCA13Q86UQ4 5058 aa6.13□□□□□ -1.43
UBR1-210ENST00000569337 IGLV5-45A0A087WSX0 123 aa6.13□□□□□ -1.43
UBR1-210ENST00000569337 F8VRH5 84 aa6.13□□□□□ -1.43
UBR1-210ENST00000569337 KRTDAPP60985 99 aa6.13□□□□□ -1.43
UBR1-210ENST00000569337 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
UBR1-210ENST00000569337 ZNF22P17026 224 aaPredicted RBP6.12□□□□□ -1.43
UBR1-210ENST00000569337 HERVK_113P63121 156 aa6.12□□□□□ -1.43
UBR1-210ENST00000569337 HAMPP81172 84 aa6.12□□□□□ -1.43
UBR1-210ENST00000569337 LINC01545Q5VT33 79 aa6.12□□□□□ -1.43
UBR1-210ENST00000569337 PET117Q6UWS5 81 aa6.12□□□□□ -1.43
UBR1-210ENST00000569337 C15orf56Q8N910 161 aa6.12□□□□□ -1.43
UBR1-210ENST00000569337 CHAC1Q9BUX1 264 aa6.12□□□□□ -1.43
UBR1-210ENST00000569337 GEMIN7Q9H840 131 aaKnown RBP6.12□□□□□ -1.43
UBR1-210ENST00000569337 FAM30AQ9NZY2 134 aa6.12□□□□□ -1.43
UBR1-210ENST00000569337 A0A087WZ39 114 aa6.11□□□□□ -1.43
UBR1-210ENST00000569337 TMEM238LA0A1B0GVL6 79 aa6.11□□□□□ -1.43
UBR1-210ENST00000569337 USP17L23D6RBM5 183 aa6.11□□□□□ -1.43
UBR1-210ENST00000569337 COX7A2LO14548 114 aa6.11□□□□□ -1.43
UBR1-210ENST00000569337 LINC01620Q4KN68 170 aa6.11□□□□□ -1.43
UBR1-210ENST00000569337 LINC00469Q8N7U9 141 aa6.11□□□□□ -1.43
UBR1-210ENST00000569337 OR10D4PQ8NGN7 298 aa6.11□□□□□ -1.43
UBR1-210ENST00000569337 FAM229AH3BQW9 127 aa6.1□□□□□ -1.43
UBR1-210ENST00000569337 SPINK8P0C7L1 97 aa6.1□□□□□ -1.43
UBR1-210ENST00000569337 SEC11AP67812 179 aa6.1□□□□□ -1.43
UBR1-210ENST00000569337 LINC00526Q96FQ7 95 aa6.1□□□□□ -1.43
UBR1-210ENST00000569337 IGHV3-64A0A075B6Q5 118 aa6.09□□□□□ -1.43
UBR1-210ENST00000569337 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
UBR1-210ENST00000569337 DPM2O94777 84 aa6.09□□□□□ -1.43
UBR1-210ENST00000569337 IGKCP01834 107 aa6.09□□□□□ -1.43
UBR1-210ENST00000569337 SLPIP03973 132 aa6.09□□□□□ -1.43
UBR1-210ENST00000569337 HIGD2BQ4VC39 106 aa6.09□□□□□ -1.43
UBR1-210ENST00000569337 TMEM170BQ5T4T1 132 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms