RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 PRSS3P2Q8NHM4 247 aa6.33□□□□□ -1.4
CLN6-209ENST00000569336 MRPL18Q9H0U6 180 aaKnown RBP6.33□□□□□ -1.4
CLN6-209ENST00000569336 IGLV4-3A0A075B6K6 122 aa6.32□□□□□ -1.4
CLN6-209ENST00000569336 FABP9Q0Z7S8 132 aa6.32□□□□□ -1.4
CLN6-209ENST00000569336 SDIM1Q6ZPB5 146 aa6.32□□□□□ -1.4
CLN6-209ENST00000569336 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
CLN6-209ENST00000569336 OR10D4PQ8NGN7 298 aa6.32□□□□□ -1.4
CLN6-209ENST00000569336 CARD19Q96LW7 228 aa6.32□□□□□ -1.4
CLN6-209ENST00000569336 ALKBH7Q9BT30 221 aaPredicted RBP6.32□□□□□ -1.4
CLN6-209ENST00000569336 SMCO4Q9NRQ5 59 aa6.32□□□□□ -1.4
CLN6-209ENST00000569336 DMBT1Q9UGM3 2413 aaPredicted RBP6.32□□□□□ -1.4
CLN6-209ENST00000569336 FLG2Q5D862 2391 aaPredicted RBP6.32□□□□□ -1.4
CLN6-209ENST00000569336 CIRBPQ14011 172 aaKnown RBP6.31□□□□□ -1.4
CLN6-209ENST00000569336 CIRBP-AS1Q8TBR5 109 aa6.31□□□□□ -1.4
CLN6-209ENST00000569336 FAM104AQ969W3 186 aa6.31□□□□□ -1.4
CLN6-209ENST00000569336 TIMM17AQ99595 171 aa6.31□□□□□ -1.4
CLN6-209ENST00000569336 OPRPNQ99935 248 aaPredicted RBP6.31□□□□□ -1.4
CLN6-209ENST00000569336 VCX2Q9H322 139 aa6.31□□□□□ -1.4
CLN6-209ENST00000569336 IGHV3OR16-9A0A0B4J2B5 98 aa6.3□□□□□ -1.4
CLN6-209ENST00000569336 SLPIP03973 132 aa6.3□□□□□ -1.4
CLN6-209ENST00000569336 SEC11AP67812 179 aa6.3□□□□□ -1.4
CLN6-209ENST00000569336 SYCNQ0VAF6 134 aa6.3□□□□□ -1.4
CLN6-209ENST00000569336 FA2HQ7L5A8 372 aa6.3□□□□□ -1.4
CLN6-209ENST00000569336 C5orf38Q86SI9 138 aa6.3□□□□□ -1.4
CLN6-209ENST00000569336 TOMM6Q96B49 74 aa6.3□□□□□ -1.4
CLN6-209ENST00000569336 C2orf48Q96LS8 159 aa6.3□□□□□ -1.4
CLN6-209ENST00000569336 LINC00474Q9P2X8 69 aa6.3□□□□□ -1.4
CLN6-209ENST00000569336 TRAPPC1Q9Y5R8 145 aa6.3□□□□□ -1.4
CLN6-209ENST00000569336 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.3□□□□□ -1.4
CLN6-209ENST00000569336 IGLV4-69A0A075B6H9 119 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 LINC01546A6NGU7 62 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 IGIPA6NJ69 53 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 F8WDY8 70 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 INAFM2P0DMQ5 153 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 COX6A2Q02221 97 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 SPAG11BQ08648 103 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 ERASQ7Z444 233 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 SPACA4Q8TDM5 124 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 ORAOV1Q8WV07 137 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 CAMK2N2Q96S95 79 aa6.29□□□□□ -1.4
CLN6-209ENST00000569336 MYCBP2O75592 4640 aa6.28□□□□□ -1.4
CLN6-209ENST00000569336 A0A087WZ39 114 aa6.28□□□□□ -1.4
CLN6-209ENST00000569336 UBE2D1P51668 147 aa6.28□□□□□ -1.4
CLN6-209ENST00000569336 LINC00242Q5T6M2 205 aa6.28□□□□□ -1.4
CLN6-209ENST00000569336 LINC00173Q6ZV60 143 aa6.28□□□□□ -1.4
CLN6-209ENST00000569336 LINC00526Q96FQ7 95 aa6.28□□□□□ -1.4
CLN6-209ENST00000569336 DPH3Q96FX2 82 aa6.28□□□□□ -1.4
CLN6-209ENST00000569336 SCGB3A1Q96QR1 104 aa6.28□□□□□ -1.4
CLN6-209ENST00000569336 AMELXQ99217 191 aa6.28□□□□□ -1.4
CLN6-209ENST00000569336 IGKV2-24A0A0C4DH68 120 aa6.27□□□□□ -1.41
CLN6-209ENST00000569336 LOC107984640A0A0U1RRK4 108 aa6.27□□□□□ -1.41
CLN6-209ENST00000569336 NDUFA1O15239 70 aa6.27□□□□□ -1.41
CLN6-209ENST00000569336 RAB5BP61020 215 aa6.27□□□□□ -1.41
CLN6-209ENST00000569336 HERVK_113P63121 156 aa6.27□□□□□ -1.41
CLN6-209ENST00000569336 LINC01561Q8N1V8 128 aa6.27□□□□□ -1.41
CLN6-209ENST00000569336 PANO1I0J062 215 aa6.26□□□□□ -1.41
CLN6-209ENST00000569336 CHTF8P0CG12 524 aa6.26□□□□□ -1.41
CLN6-209ENST00000569336 RNF151Q2KHN1 245 aa6.26□□□□□ -1.41
CLN6-209ENST00000569336 MAJINQ3KP22 176 aa6.26□□□□□ -1.41
CLN6-209ENST00000569336 Q6ZRU5 148 aa6.26□□□□□ -1.41
CLN6-209ENST00000569336 FAM19A3Q7Z5A8 133 aa6.26□□□□□ -1.41
CLN6-209ENST00000569336 C18orf32Q8TCD1 76 aa6.26□□□□□ -1.41
CLN6-209ENST00000569336 GEMIN7Q9H840 131 aaKnown RBP6.26□□□□□ -1.41
CLN6-209ENST00000569336 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
CLN6-209ENST00000569336 A0A087WYN8 130 aa6.25□□□□□ -1.41
CLN6-209ENST00000569336 A0A096LNI7 61 aa6.25□□□□□ -1.41
CLN6-209ENST00000569336 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.25□□□□□ -1.41
CLN6-209ENST00000569336 RPL37AP61513 92 aaKnown RBP6.25□□□□□ -1.41
CLN6-209ENST00000569336 PACRGQ96M98 296 aaPredicted RBP6.25□□□□□ -1.41
CLN6-209ENST00000569336 MRPL35Q9NZE8 188 aaKnown RBP6.25□□□□□ -1.41
CLN6-209ENST00000569336 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
CLN6-209ENST00000569336 HBDP02042 147 aa6.24□□□□□ -1.41
CLN6-209ENST00000569336 PRSS2P07478 247 aa6.24□□□□□ -1.41
CLN6-209ENST00000569336 CBLN2Q8IUK8 224 aa6.24□□□□□ -1.41
CLN6-209ENST00000569336 C7orf33Q8WU49 177 aa6.24□□□□□ -1.41
CLN6-209ENST00000569336 YPEL4Q96NS1 127 aa6.24□□□□□ -1.41
CLN6-209ENST00000569336 LINC00614P0C842 121 aa6.23□□□□□ -1.41
CLN6-209ENST00000569336 PTTG1IPP53801 180 aa6.23□□□□□ -1.41
CLN6-209ENST00000569336 RPL18AQ02543 176 aaKnown RBP6.23□□□□□ -1.41
CLN6-209ENST00000569336 PMVKQ15126 192 aa6.23□□□□□ -1.41
CLN6-209ENST00000569336 ZC2HC1BQ5TFG8 222 aa6.23□□□□□ -1.41
CLN6-209ENST00000569336 SLC7A5P1Q8MH63 180 aa6.23□□□□□ -1.41
CLN6-209ENST00000569336 STPG4Q8N801 248 aa6.23□□□□□ -1.41
CLN6-209ENST00000569336 TRBV30A0A0K0K1B3 111 aa6.22□□□□□ -1.41
CLN6-209ENST00000569336 TINCRA0A1B0GVN0 87 aa6.22□□□□□ -1.41
CLN6-209ENST00000569336 J3QL48 77 aa6.22□□□□□ -1.41
CLN6-209ENST00000569336 CKS1BP61024 79 aa6.22□□□□□ -1.41
CLN6-209ENST00000569336 Q8IZM0 81 aa6.22□□□□□ -1.41
CLN6-209ENST00000569336 LINC00469Q8N7U9 141 aa6.22□□□□□ -1.41
CLN6-209ENST00000569336 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
CLN6-209ENST00000569336 A0A0J9YXV3 536 aa6.21□□□□□ -1.42
CLN6-209ENST00000569336 ATP5LO75964 103 aa6.21□□□□□ -1.42
CLN6-209ENST00000569336 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
CLN6-209ENST00000569336 CHCHD1Q96BP2 118 aaKnown RBP6.21□□□□□ -1.42
CLN6-209ENST00000569336 TOMM7Q9P0U1 55 aa6.21□□□□□ -1.42
CLN6-209ENST00000569336 CDKN2A-AS1Q9UH64 79 aa6.21□□□□□ -1.42
CLN6-209ENST00000569336 IGLV5-45A0A087WSX0 123 aa6.2□□□□□ -1.42
CLN6-209ENST00000569336 A0A096LNJ9 63 aa6.2□□□□□ -1.42
CLN6-209ENST00000569336 H3BRM9 83 aa6.2□□□□□ -1.42
CLN6-209ENST00000569336 TLX1NBP0CAT3 122 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms