RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 HIST2H2BEQ16778 126 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 PDZD11Q5EBL8 140 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-217ENST00000569263 C15orf56Q8N910 161 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 HIST1H2BHQ93079 126 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 HIST1H2BNQ99877 126 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 HIST1H2BMQ99879 126 aa8.57□□□□□ -1.04
CNOT1-217ENST00000569263 DNAH11Q96DT5 4516 aa8.56□□□□□ -1.04
CNOT1-217ENST00000569263 IGHV1-58A0A0C4DH39 117 aa8.56□□□□□ -1.04
CNOT1-217ENST00000569263 PRSS1P07477 247 aa8.56□□□□□ -1.04
CNOT1-217ENST00000569263 NDUFA6P56556 154 aa8.56□□□□□ -1.04
CNOT1-217ENST00000569263 PMVKQ15126 192 aa8.56□□□□□ -1.04
CNOT1-217ENST00000569263 C5orf38Q86SI9 138 aa8.56□□□□□ -1.04
CNOT1-217ENST00000569263 FAM19A2Q8N3H0 131 aa8.56□□□□□ -1.04
CNOT1-217ENST00000569263 APOMO95445 188 aa8.55□□□□□ -1.04
CNOT1-217ENST00000569263 LINC00310P59036 64 aa8.55□□□□□ -1.04
CNOT1-217ENST00000569263 SEC11AP67812 179 aa8.55□□□□□ -1.04
CNOT1-217ENST00000569263 HIGD2BQ4VC39 106 aa8.55□□□□□ -1.04
CNOT1-217ENST00000569263 LINC00242Q5T6M2 205 aa8.55□□□□□ -1.04
CNOT1-217ENST00000569263 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
CNOT1-217ENST00000569263 CST9LQ9H4G1 147 aa8.54□□□□□ -1.04
CNOT1-217ENST00000569263 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
CNOT1-217ENST00000569263 GVQW2A0A096LPI5 108 aaPredicted RBP8.53□□□□□ -1.04
CNOT1-217ENST00000569263 GCSHP23434 173 aa8.53□□□□□ -1.04
CNOT1-217ENST00000569263 HERVK_113P63121 156 aa8.53□□□□□ -1.04
CNOT1-217ENST00000569263 COX6A2Q02221 97 aa8.53□□□□□ -1.04
CNOT1-217ENST00000569263 FAM19A3Q7Z5A8 133 aa8.53□□□□□ -1.04
CNOT1-217ENST00000569263 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
CNOT1-217ENST00000569263 A0A0J9YXV3 536 aa8.52□□□□□ -1.05
CNOT1-217ENST00000569263 ZNF561-AS1K7EIQ3 104 aa8.52□□□□□ -1.05
CNOT1-217ENST00000569263 LEPROTL1O95214 131 aa8.52□□□□□ -1.05
CNOT1-217ENST00000569263 IFI27L1Q96BM0 104 aa8.52□□□□□ -1.05
CNOT1-217ENST00000569263 A0A087WZ39 114 aa8.51□□□□□ -1.05
CNOT1-217ENST00000569263 NUPR1O60356 82 aa8.51□□□□□ -1.05
CNOT1-217ENST00000569263 LINC00469Q8N7U9 141 aa8.51□□□□□ -1.05
CNOT1-217ENST00000569263 OR10D4PQ8NGN7 298 aa8.51□□□□□ -1.05
CNOT1-217ENST00000569263 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
CNOT1-217ENST00000569263 PKHD1P08F94 4074 aa8.5□□□□□ -1.05
CNOT1-217ENST00000569263 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
CNOT1-217ENST00000569263 CNBPP62633 177 aaKnown RBP8.5□□□□□ -1.05
CNOT1-217ENST00000569263 SPAG11BQ08648 103 aa8.5□□□□□ -1.05
CNOT1-217ENST00000569263 LINC00526Q96FQ7 95 aa8.5□□□□□ -1.05
CNOT1-217ENST00000569263 PACRGQ96M98 296 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-217ENST00000569263 CHAC1Q9BUX1 264 aa8.5□□□□□ -1.05
CNOT1-217ENST00000569263 HSPB8Q9UJY1 196 aa8.5□□□□□ -1.05
CNOT1-217ENST00000569263 IGHV3-64A0A075B6Q5 118 aa8.49□□□□□ -1.05
CNOT1-217ENST00000569263 FABP4P15090 132 aa8.49□□□□□ -1.05
CNOT1-217ENST00000569263 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
CNOT1-217ENST00000569263 CDKN2A-AS1Q9UH64 79 aa8.49□□□□□ -1.05
CNOT1-217ENST00000569263 BIRC6Q9NR09 4857 aa8.48□□□□□ -1.05
CNOT1-217ENST00000569263 IGLV4-69A0A075B6H9 119 aa8.48□□□□□ -1.05
CNOT1-217ENST00000569263 H0Y8G0 127 aa8.48□□□□□ -1.05
CNOT1-217ENST00000569263 KRTAP10-1P60331 282 aa8.48□□□□□ -1.05
CNOT1-217ENST00000569263 LINC01561Q8N1V8 128 aa8.48□□□□□ -1.05
CNOT1-217ENST00000569263 CHTOPQ9Y3Y2 248 aaKnown RBP8.48□□□□□ -1.05
CNOT1-217ENST00000569263 TRAV12-1A0A0B4J245 112 aa8.47□□□□□ -1.05
CNOT1-217ENST00000569263 H3BRM9 83 aa8.47□□□□□ -1.05
CNOT1-217ENST00000569263 SLPIP03973 132 aa8.47□□□□□ -1.05
CNOT1-217ENST00000569263 IGLC3P0DOY3 106 aa8.47□□□□□ -1.05
CNOT1-217ENST00000569263 C9orf163Q8N9P6 203 aa8.47□□□□□ -1.05
CNOT1-217ENST00000569263 C2orf48Q96LS8 159 aa8.47□□□□□ -1.05
CNOT1-217ENST00000569263 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
CNOT1-217ENST00000569263 CAMK2N2Q96S95 79 aa8.47□□□□□ -1.05
CNOT1-217ENST00000569263 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
CNOT1-217ENST00000569263 DNAH5Q8TE73 4624 aa8.47□□□□□ -1.05
CNOT1-217ENST00000569263 IGLV5-45A0A087WSX0 123 aa8.46□□□□□ -1.06
CNOT1-217ENST00000569263 PRSS2P07478 247 aa8.46□□□□□ -1.06
CNOT1-217ENST00000569263 SYCNQ0VAF6 134 aa8.46□□□□□ -1.06
CNOT1-217ENST00000569263 COA6Q5JTJ3 125 aaKnown RBP8.46□□□□□ -1.06
CNOT1-217ENST00000569263 TOMM7Q9P0U1 55 aa8.46□□□□□ -1.06
CNOT1-217ENST00000569263 MAP1LC3CQ9BXW4 147 aa8.45□□□□□ -1.06
CNOT1-217ENST00000569263 C11orf86A6NJI1 115 aa8.44□□□□□ -1.06
CNOT1-217ENST00000569263 F8VRH5 84 aa8.44□□□□□ -1.06
CNOT1-217ENST00000569263 F8WDY8 70 aa8.44□□□□□ -1.06
CNOT1-217ENST00000569263 NDUFA1O15239 70 aa8.44□□□□□ -1.06
CNOT1-217ENST00000569263 SPINK8P0C7L1 97 aa8.44□□□□□ -1.06
CNOT1-217ENST00000569263 ZNF22P17026 224 aaPredicted RBP8.44□□□□□ -1.06
CNOT1-217ENST00000569263 TMEM170BQ5T4T1 132 aa8.44□□□□□ -1.06
CNOT1-217ENST00000569263 MRPL35Q9NZE8 188 aaKnown RBP8.44□□□□□ -1.06
CNOT1-217ENST00000569263 PKIGQ9Y2B9 76 aa8.44□□□□□ -1.06
CNOT1-217ENST00000569263 SMIM1B2RUZ4 78 aa8.43□□□□□ -1.06
CNOT1-217ENST00000569263 Q6ZRU5 148 aa8.43□□□□□ -1.06
CNOT1-217ENST00000569263 Q8IZM0 81 aa8.43□□□□□ -1.06
CNOT1-217ENST00000569263 CDK2AP2O75956 126 aa8.42□□□□□ -1.06
CNOT1-217ENST00000569263 S100A6P06703 90 aa8.42□□□□□ -1.06
CNOT1-217ENST00000569263 CKS1BP61024 79 aa8.42□□□□□ -1.06
CNOT1-217ENST00000569263 KIAA0087Q14695 138 aa8.42□□□□□ -1.06
CNOT1-217ENST00000569263 ODF1Q14990 250 aa8.42□□□□□ -1.06
CNOT1-217ENST00000569263 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
CNOT1-217ENST00000569263 COX7B2Q8TF08 81 aa8.41□□□□□ -1.06
CNOT1-217ENST00000569263 CXCL5P42830 114 aa8.4□□□□□ -1.06
CNOT1-217ENST00000569263 C2orf82Q6UX34 121 aa8.4□□□□□ -1.06
CNOT1-217ENST00000569263 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.06
CNOT1-217ENST00000569263 LRP1BQ9NZR2 4599 aa8.4□□□□□ -1.06
CNOT1-217ENST00000569263 LOC107984640A0A0U1RRK4 108 aa8.39□□□□□ -1.07
CNOT1-217ENST00000569263 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
CNOT1-217ENST00000569263 DPM2O94777 84 aa8.39□□□□□ -1.07
CNOT1-217ENST00000569263 PLNP26678 52 aa8.39□□□□□ -1.07
CNOT1-217ENST00000569263 S100A2P29034 98 aa8.39□□□□□ -1.07
CNOT1-217ENST00000569263 RNF151Q2KHN1 245 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms