RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
CDH13-211ENST00000568770 CD164L2Q6UWJ8 174 aa3.3□□□□□ -1.88
CDH13-211ENST00000568770 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
CDH13-211ENST00000568770 MAP1LC3B2A6NCE7 125 aa3.29□□□□□ -1.88
CDH13-211ENST00000568770 BCL2L11O43521 198 aa3.29□□□□□ -1.88
CDH13-211ENST00000568770 APCSP02743 223 aa3.29□□□□□ -1.88
CDH13-211ENST00000568770 ZNF25P17030 456 aaPredicted RBP3.29□□□□□ -1.88
CDH13-211ENST00000568770 RIGQ13278 110 aa3.29□□□□□ -1.88
CDH13-211ENST00000568770 SS18Q15532 418 aa3.29□□□□□ -1.88
CDH13-211ENST00000568770 RPL7L1Q6DKI1 246 aaKnown RBP3.29□□□□□ -1.88
CDH13-211ENST00000568770 BAGE2Q86Y30 109 aa3.29□□□□□ -1.88
CDH13-211ENST00000568770 OR2D3Q8NGH3 330 aa3.29□□□□□ -1.88
CDH13-211ENST00000568770 TMEM101Q96IK0 257 aa3.29□□□□□ -1.88
CDH13-211ENST00000568770 MARVELD1Q9BSK0 173 aa3.29□□□□□ -1.88
CDH13-211ENST00000568770 MAP1LC3BQ9GZQ8 125 aa3.29□□□□□ -1.88
CDH13-211ENST00000568770 CARHSP1Q9Y2V2 147 aaKnown RBP3.29□□□□□ -1.88
CDH13-211ENST00000568770 NCR2O95944 276 aa3.28□□□□□ -1.88
CDH13-211ENST00000568770 TRGC1P0CF51 173 aa3.28□□□□□ -1.88
CDH13-211ENST00000568770 DEFA1P59665 94 aa3.28□□□□□ -1.88
CDH13-211ENST00000568770 AKR1C8PQ5T2L2 129 aa3.28□□□□□ -1.88
CDH13-211ENST00000568770 EIF5AL1Q6IS14 154 aaKnown RBP3.28□□□□□ -1.88
CDH13-211ENST00000568770 FAM19A5Q7Z5A7 132 aaPredicted RBP3.28□□□□□ -1.88
CDH13-211ENST00000568770 GATD1Q8NB37 220 aa3.28□□□□□ -1.88
CDH13-211ENST00000568770 TSKUQ8WUA8 353 aa3.28□□□□□ -1.88
CDH13-211ENST00000568770 RPL39LQ96EH5 51 aaKnown RBP3.28□□□□□ -1.88
CDH13-211ENST00000568770 BTF3L4Q96K17 158 aa3.28□□□□□ -1.88
CDH13-211ENST00000568770 OCR1Q9BZK8 76 aa3.28□□□□□ -1.88
CDH13-211ENST00000568770 RPP21Q9H633 154 aaKnown RBP3.28□□□□□ -1.88
CDH13-211ENST00000568770 BORCS7-ASMTA0A0B4J1R7 106 aa3.27□□□□□ -1.89
CDH13-211ENST00000568770 C19orf71A6NCJ1 209 aa3.27□□□□□ -1.89
CDH13-211ENST00000568770 F2Z2F3 143 aa3.27□□□□□ -1.89
CDH13-211ENST00000568770 COX7A2LO14548 114 aa3.27□□□□□ -1.89
CDH13-211ENST00000568770 ESDP10768 282 aa3.27□□□□□ -1.89
CDH13-211ENST00000568770 RPL35P42766 123 aaKnown RBP3.27□□□□□ -1.89
CDH13-211ENST00000568770 RPS20P60866 119 aaKnown RBP3.27□□□□□ -1.89
CDH13-211ENST00000568770 IFITM3Q01628 133 aa3.27□□□□□ -1.89
CDH13-211ENST00000568770 LYZL1Q6UWQ5 148 aa3.27□□□□□ -1.89
CDH13-211ENST00000568770 TMUB2Q71RG4 321 aa3.27□□□□□ -1.89
CDH13-211ENST00000568770 RETNLBQ9BQ08 111 aa3.27□□□□□ -1.89
CDH13-211ENST00000568770 CDC42SE2Q9NRR3 84 aa3.27□□□□□ -1.89
CDH13-211ENST00000568770 A0A1B0GV50 99 aa3.26□□□□□ -1.89
CDH13-211ENST00000568770 SDHAF1A6NFY7 115 aa3.26□□□□□ -1.89
CDH13-211ENST00000568770 I3L3M4 83 aa3.26□□□□□ -1.89
CDH13-211ENST00000568770 UPK1BO75841 260 aa3.26□□□□□ -1.89
CDH13-211ENST00000568770 PMCHP20382 165 aa3.26□□□□□ -1.89
CDH13-211ENST00000568770 UBE2BP63146 152 aa3.26□□□□□ -1.89
CDH13-211ENST00000568770 Q5BKY6 102 aa3.26□□□□□ -1.89
CDH13-211ENST00000568770 XKRY2A2RUG3 117 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 C1orf196B1AJZ1 125 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 M0QXV9 152 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 ZNF861PO60384 105 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 PFDN1O60925 122 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 IFNA1P01562 189 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 CTRLP40313 264 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 FOXA3P55318 350 aaPredicted RBP3.25□□□□□ -1.89
CDH13-211ENST00000568770 SPAG11BQ08648 103 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 TPRXLQ17RH7 258 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 C5orf38Q86SI9 138 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 MRPL52Q86TS9 123 aaKnown RBP3.25□□□□□ -1.89
CDH13-211ENST00000568770 C9orf62Q8N4C0 152 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 TYMSOSQ8TAI1 123 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 SFT2D1Q8WV19 159 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 MRAP2Q96G30 205 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 IMMP2LQ96T52 175 aa3.25□□□□□ -1.89
CDH13-211ENST00000568770 MRPL35Q9NZE8 188 aaKnown RBP3.25□□□□□ -1.89
CDH13-211ENST00000568770 G3V3Q6 166 aa3.24□□□□□ -1.89
CDH13-211ENST00000568770 CENPWQ5EE01 88 aa3.24□□□□□ -1.89
CDH13-211ENST00000568770 RNASE13Q5GAN3 156 aaKnown RBP3.24□□□□□ -1.89
CDH13-211ENST00000568770 S100ZQ8WXG8 99 aa3.24□□□□□ -1.89
CDH13-211ENST00000568770 CNFNQ9BYD5 112 aa3.24□□□□□ -1.89
CDH13-211ENST00000568770 RNASE7Q9H1E1 156 aaKnown RBP3.24□□□□□ -1.89
CDH13-211ENST00000568770 TMEM242Q9NWH2 141 aa3.24□□□□□ -1.89
CDH13-211ENST00000568770 ALG5Q9Y673 324 aa3.24□□□□□ -1.89
CDH13-211ENST00000568770 FXYD6-FXYD2A0A087WZ82 144 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 TRAV13-1A0A0B4J241 112 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 TRBV6-5A0A0K0K1A5 114 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 RAB19A4D1S5 217 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 NDUFA1O15239 70 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 TLX1NBP0CAT3 122 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 CRYGAP11844 174 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 GNG4P50150 75 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 TEX261Q6UWH6 196 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 UNQ6190/PRO20217Q6UXQ8 127 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 LINC00299Q6ZSB3 139 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 KCNRGQ8N5I3 272 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 OR10D4PQ8NGN7 298 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 FAM213BQ8TBF2 198 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 ORAOV1Q8WV07 137 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 MBD3L1Q8WWY6 194 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 SMDT1Q9H4I9 107 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 C6orf48Q9UBA6 75 aa3.23□□□□□ -1.89
CDH13-211ENST00000568770 C7orf77A4D0Y5 90 aa3.22□□□□□ -1.89
CDH13-211ENST00000568770 HERV-K104P63124 156 aa3.22□□□□□ -1.89
CDH13-211ENST00000568770 TMEM241Q24JQ0 296 aa3.22□□□□□ -1.89
CDH13-211ENST00000568770 KRTAP13-2Q52LG2 175 aa3.22□□□□□ -1.89
CDH13-211ENST00000568770 C9orf129Q5T035 196 aaKnown RBP3.22□□□□□ -1.89
CDH13-211ENST00000568770 LINC00173Q6ZV60 143 aa3.22□□□□□ -1.89
CDH13-211ENST00000568770 SMIM15Q7Z3B0 74 aa3.22□□□□□ -1.89
CDH13-211ENST00000568770 KRTAP4-1Q9BYQ7 146 aa3.22□□□□□ -1.89
CDH13-211ENST00000568770 ST20Q9HBF5 79 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms