RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 ANKRD17O75179 2603 aaKnown RBP-0.57□□□□□ -2.5
CYLD-213ENST00000568744 ROCK2O75116 1388 aaKnown RBP-0.57□□□□□ -2.5
CYLD-213ENST00000568744 ROBO1Q9Y6N7 1651 aa-0.58□□□□□ -2.5
CYLD-213ENST00000568744 GAPVD1Q14C86 1478 aa-0.58□□□□□ -2.5
CYLD-213ENST00000568744 UBE2L5PA0A1B0GUS4 154 aa-0.58□□□□□ -2.5
CYLD-213ENST00000568744 UBA52P62987 128 aaKnown RBP-0.58□□□□□ -2.5
CYLD-213ENST00000568744 UBE2L3P68036 154 aaKnown RBP-0.58□□□□□ -2.5
CYLD-213ENST00000568744 CDC42SE2Q9NRR3 84 aa-0.58□□□□□ -2.5
CYLD-213ENST00000568744 SMG6Q86US8 1419 aaKnown RBP-0.58□□□□□ -2.5
CYLD-213ENST00000568744 WNK1Q9H4A3 2382 aa-0.59□□□□□ -2.5
CYLD-213ENST00000568744 KDM5AP29375 1690 aaKnown RBP-0.59□□□□□ -2.5
CYLD-213ENST00000568744 DSTQ03001 7570 aaKnown RBP-0.59□□□□□ -2.5
CYLD-213ENST00000568744 WHAMMP3Q1A5X7 153 aa-0.59□□□□□ -2.5
CYLD-213ENST00000568744 C10orf113Q5VZT2 155 aa-0.59□□□□□ -2.5
CYLD-213ENST00000568744 FAM223AQ8IWN6 122 aa-0.59□□□□□ -2.5
CYLD-213ENST00000568744 ARL2-SNX15V9GYD0 113 aa-0.59□□□□□ -2.5
CYLD-213ENST00000568744 EP300Q09472 2414 aaPredicted RBP-0.59□□□□□ -2.5
CYLD-213ENST00000568744 ARHGEF5Q12774 1597 aa-0.6□□□□□ -2.51
CYLD-213ENST00000568744 TRBV7-4A0A0J9YYF1 115 aa-0.6□□□□□ -2.51
CYLD-213ENST00000568744 SNAPC5O75971 98 aa-0.6□□□□□ -2.51
CYLD-213ENST00000568744 GNG11P61952 73 aa-0.6□□□□□ -2.51
CYLD-213ENST00000568744 FDCSPQ8NFU4 85 aa-0.6□□□□□ -2.51
CYLD-213ENST00000568744 SPRR4Q96PI1 79 aa-0.6□□□□□ -2.51
CYLD-213ENST00000568744 BTAF1O14981 1849 aa-0.61□□□□□ -2.51
CYLD-213ENST00000568744 SPINK4O60575 86 aa-0.61□□□□□ -2.51
CYLD-213ENST00000568744 SPRR2BP35325 72 aa-0.61□□□□□ -2.51
CYLD-213ENST00000568744 ATP5EP56381 51 aaPredicted RBP-0.61□□□□□ -2.51
CYLD-213ENST00000568744 ATRQ13535 2644 aa-0.61□□□□□ -2.51
CYLD-213ENST00000568744 TULP4Q9NRJ4 1543 aa-0.62□□□□□ -2.51
CYLD-213ENST00000568744 ALMS1Q8TCU4 4167 aa-0.62□□□□□ -2.51
CYLD-213ENST00000568744 FAM24AA6NFZ4 105 aa-0.62□□□□□ -2.51
CYLD-213ENST00000568744 RPL13AP3Q6NVV1 102 aa-0.62□□□□□ -2.51
CYLD-213ENST00000568744 MAGI1Q96QZ7 1491 aaPredicted RBP-0.62□□□□□ -2.51
CYLD-213ENST00000568744 SRRM2Q9UQ35 2752 aaKnown RBP-0.63□□□□□ -2.51
CYLD-213ENST00000568744 LINC00959A0A1B0GUT2 108 aa-0.63□□□□□ -2.51
CYLD-213ENST00000568744 FAM167A-AS1Q96KT0 104 aa-0.63□□□□□ -2.51
CYLD-213ENST00000568744 LINC01600Q96MT4 127 aa-0.63□□□□□ -2.51
CYLD-213ENST00000568744 DPH3P1Q9H4G8 78 aa-0.63□□□□□ -2.51
CYLD-213ENST00000568744 MANBALQ9NQG1 85 aa-0.63□□□□□ -2.51
CYLD-213ENST00000568744 ACANP16112 2415 aa-0.63□□□□□ -2.51
CYLD-213ENST00000568744 CUL7Q14999 1698 aa-0.63□□□□□ -2.51
CYLD-213ENST00000568744 HMGXB3Q12766 1538 aa-0.64□□□□□ -2.51
CYLD-213ENST00000568744 EHBP1L1Q8N3D4 1523 aa-0.64□□□□□ -2.51
CYLD-213ENST00000568744 HECTD4Q9Y4D8 3996 aa-0.64□□□□□ -2.51
CYLD-213ENST00000568744 F6UZH7 168 aa-0.64□□□□□ -2.51
CYLD-213ENST00000568744 TENM2Q9NT68 2774 aa-0.64□□□□□ -2.51
CYLD-213ENST00000568744 CHD8Q9HCK8 2581 aa-0.64□□□□□ -2.51
CYLD-213ENST00000568744 TET3O43151 1660 aa-0.65□□□□□ -2.51
CYLD-213ENST00000568744 MYOM2P54296 1465 aa-0.65□□□□□ -2.51
CYLD-213ENST00000568744 TCHHQ07283 1943 aa-0.65□□□□□ -2.51
CYLD-213ENST00000568744 SYS1-DBNDD2H3BUS1 97 aa-0.65□□□□□ -2.51
CYLD-213ENST00000568744 Q0VG73 95 aa-0.65□□□□□ -2.51
CYLD-213ENST00000568744 DEFB105AQ8NG35 78 aa-0.65□□□□□ -2.51
CYLD-213ENST00000568744 PRO1933Q9H354 126 aa-0.65□□□□□ -2.51
CYLD-213ENST00000568744 URB1O60287 2271 aaKnown RBP-0.65□□□□□ -2.51
CYLD-213ENST00000568744 SCAPERQ9BY12 1400 aa-0.65□□□□□ -2.51
CYLD-213ENST00000568744 TRAPPC2P0DI81 140 aa-0.66□□□□□ -2.52
CYLD-213ENST00000568744 TRAPPC2BP0DI82 140 aa-0.66□□□□□ -2.52
CYLD-213ENST00000568744 KLK9Q2XQG4 91 aa-0.66□□□□□ -2.52
CYLD-213ENST00000568744 SFTA2Q6UW10 78 aa-0.66□□□□□ -2.52
CYLD-213ENST00000568744 COL6A3P12111 3177 aa-0.66□□□□□ -2.52
CYLD-213ENST00000568744 FAT2Q9NYQ8 4349 aa-0.66□□□□□ -2.52
CYLD-213ENST00000568744 NALCNQ8IZF0 1738 aa-0.67□□□□□ -2.52
CYLD-213ENST00000568744 A0A1B0GWA3 101 aa-0.67□□□□□ -2.52
CYLD-213ENST00000568744 COX6CP09669 75 aa-0.67□□□□□ -2.52
CYLD-213ENST00000568744 SVBPQ8N300 66 aa-0.67□□□□□ -2.52
CYLD-213ENST00000568744 SETBP1Q9Y6X0 1596 aa-0.67□□□□□ -2.52
CYLD-213ENST00000568744 NAP1L6A6NFF2 107 aa-0.68□□□□□ -2.52
CYLD-213ENST00000568744 FLNBO75369 2602 aaKnown RBP-0.68□□□□□ -2.52
CYLD-213ENST00000568744 COX8AP10176 69 aa-0.68□□□□□ -2.52
CYLD-213ENST00000568744 UBE2D3P61077 147 aa-0.68□□□□□ -2.52
CYLD-213ENST00000568744 UBE2D2P62837 147 aa-0.68□□□□□ -2.52
CYLD-213ENST00000568744 KRTAP19-7Q3SYF9 63 aa-0.68□□□□□ -2.52
CYLD-213ENST00000568744 LCN9Q8WX39 176 aa-0.68□□□□□ -2.52
CYLD-213ENST00000568744 PRO1854Q9UHT4 67 aa-0.68□□□□□ -2.52
CYLD-213ENST00000568744 IER3IP1Q9Y5U9 82 aa-0.68□□□□□ -2.52
CYLD-213ENST00000568744 SETXQ7Z333 2677 aaKnown RBP-0.68□□□□□ -2.52
CYLD-213ENST00000568744 KIAA0556O60303 1618 aa-0.68□□□□□ -2.52
CYLD-213ENST00000568744 C1orf167Q5SNV9 1468 aa-0.68□□□□□ -2.52
CYLD-213ENST00000568744 BSNQ9UPA5 3926 aa-0.69□□□□□ -2.52
CYLD-213ENST00000568744 A0A1B0GV90 55 aa-0.69□□□□□ -2.52
CYLD-213ENST00000568744 FAM223BA6NKX1 122 aa-0.69□□□□□ -2.52
CYLD-213ENST00000568744 DLEU1O43261 78 aa-0.69□□□□□ -2.52
CYLD-213ENST00000568744 GNG4P50150 75 aa-0.69□□□□□ -2.52
CYLD-213ENST00000568744 USMG5Q96IX5 58 aa-0.69□□□□□ -2.52
CYLD-213ENST00000568744 MUC2Q02817 5179 aa-0.69□□□□□ -2.52
CYLD-213ENST00000568744 EFCAB10A6NFE3 127 aa-0.7□□□□□ -2.52
CYLD-213ENST00000568744 M0R2T5 61 aa-0.7□□□□□ -2.52
CYLD-213ENST00000568744 PPP3R1P63098 170 aa-0.7□□□□□ -2.52
CYLD-213ENST00000568744 C12orf57Q99622 126 aa-0.7□□□□□ -2.52
CYLD-213ENST00000568744 ADGRL2O95490 1459 aa-0.7□□□□□ -2.52
CYLD-213ENST00000568744 SCN7AQ01118 1682 aa-0.7□□□□□ -2.52
CYLD-213ENST00000568744 DNAJC13O75165 2243 aa-0.7□□□□□ -2.52
CYLD-213ENST00000568744 DIP2CQ9Y2E4 1556 aa-0.71□□□□□ -2.52
CYLD-213ENST00000568744 TOP2BQ02880 1626 aa-0.71□□□□□ -2.52
CYLD-213ENST00000568744 IQSEC2Q5JU85 1478 aa-0.72□□□□□ -2.52
CYLD-213ENST00000568744 CRYM-AS1A6NIL9 109 aa-0.73□□□□□ -2.53
CYLD-213ENST00000568744 CORTO00230 105 aa-0.73□□□□□ -2.53
CYLD-213ENST00000568744 SAA2P0DJI9 122 aaPredicted RBP-0.73□□□□□ -2.53
CYLD-213ENST00000568744 S100A1P23297 94 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms