RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 KRTAP26-1Q6PEX3 210 aa8.37□□□□□ -1.07
TSC2-220ENST00000568238 BAGE3Q86Y29 109 aa8.37□□□□□ -1.07
TSC2-220ENST00000568238 PYGO1Q9Y3Y4 419 aa8.37□□□□□ -1.07
TSC2-220ENST00000568238 FAT3Q8TDW7 4589 aa8.36□□□□□ -1.07
TSC2-220ENST00000568238 IGIPA6NJ69 53 aa8.36□□□□□ -1.07
TSC2-220ENST00000568238 CCL25O15444 150 aa8.36□□□□□ -1.07
TSC2-220ENST00000568238 SS18Q15532 418 aa8.36□□□□□ -1.07
TSC2-220ENST00000568238 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
TSC2-220ENST00000568238 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
TSC2-220ENST00000568238 ZC2HC1BQ5TFG8 222 aa8.35□□□□□ -1.07
TSC2-220ENST00000568238 Q6ZN92 141 aa8.35□□□□□ -1.07
TSC2-220ENST00000568238 CIRBP-AS1Q8TBR5 109 aa8.35□□□□□ -1.07
TSC2-220ENST00000568238 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
TSC2-220ENST00000568238 A0A096LNJ9 63 aa8.34□□□□□ -1.07
TSC2-220ENST00000568238 HBDP02042 147 aa8.34□□□□□ -1.07
TSC2-220ENST00000568238 PRSS1P07477 247 aa8.34□□□□□ -1.07
TSC2-220ENST00000568238 TEX43Q6ZNM6 134 aa8.34□□□□□ -1.07
TSC2-220ENST00000568238 ERASQ7Z444 233 aa8.34□□□□□ -1.07
TSC2-220ENST00000568238 CHCHD1Q96BP2 118 aaKnown RBP8.34□□□□□ -1.07
TSC2-220ENST00000568238 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
TSC2-220ENST00000568238 C1orf196B1AJZ1 125 aa8.33□□□□□ -1.08
TSC2-220ENST00000568238 J3QL48 77 aa8.33□□□□□ -1.08
TSC2-220ENST00000568238 SERF1AO75920 110 aa8.33□□□□□ -1.08
TSC2-220ENST00000568238 FOXI1Q12951 378 aa8.33□□□□□ -1.08
TSC2-220ENST00000568238 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
TSC2-220ENST00000568238 VCX2Q9H322 139 aa8.33□□□□□ -1.08
TSC2-220ENST00000568238 LINC01549A6NIU2 74 aa8.32□□□□□ -1.08
TSC2-220ENST00000568238 HSBP1O75506 76 aa8.32□□□□□ -1.08
TSC2-220ENST00000568238 NPSP0C0P6 89 aa8.32□□□□□ -1.08
TSC2-220ENST00000568238 LINC00173Q6ZV60 143 aa8.32□□□□□ -1.08
TSC2-220ENST00000568238 HIST1H2BKO60814 126 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 HIST1H2BJP06899 126 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 HIST1H2BOP23527 126 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 HIST1H2BBP33778 126 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 HIST1H2BDP58876 126 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 LINC00310P59036 64 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 HIST1H2BCP62807 126 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 HIST2H2BEQ16778 126 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 PAPPA-AS1Q5QFB9 102 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.31□□□□□ -1.08
TSC2-220ENST00000568238 CD164L2Q6UWJ8 174 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 HIST1H2BHQ93079 126 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 AMELXQ99217 191 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 HIST1H2BNQ99877 126 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 HIST1H2BMQ99879 126 aa8.31□□□□□ -1.08
TSC2-220ENST00000568238 hDV102S1A0JD36 115 aa8.3□□□□□ -1.08
TSC2-220ENST00000568238 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.3□□□□□ -1.08
TSC2-220ENST00000568238 COX7A2LO14548 114 aa8.3□□□□□ -1.08
TSC2-220ENST00000568238 UBE2D1P51668 147 aa8.3□□□□□ -1.08
TSC2-220ENST00000568238 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
TSC2-220ENST00000568238 PDZD11Q5EBL8 140 aa8.3□□□□□ -1.08
TSC2-220ENST00000568238 FAM19A2Q8N3H0 131 aa8.3□□□□□ -1.08
TSC2-220ENST00000568238 C9orf163Q8N9P6 203 aa8.3□□□□□ -1.08
TSC2-220ENST00000568238 KRTAP29-1A8MX34 341 aaPredicted RBP8.29□□□□□ -1.08
TSC2-220ENST00000568238 CNBPP62633 177 aaKnown RBP8.29□□□□□ -1.08
TSC2-220ENST00000568238 C5orf38Q86SI9 138 aa8.29□□□□□ -1.08
TSC2-220ENST00000568238 NUPR1O60356 82 aa8.28□□□□□ -1.08
TSC2-220ENST00000568238 MALP21145 153 aa8.28□□□□□ -1.08
TSC2-220ENST00000568238 NDUFA6P56556 154 aa8.28□□□□□ -1.08
TSC2-220ENST00000568238 HIGD2BQ4VC39 106 aa8.28□□□□□ -1.08
TSC2-220ENST00000568238 LINC00242Q5T6M2 205 aa8.28□□□□□ -1.08
TSC2-220ENST00000568238 CFAP161Q6P656 301 aa8.28□□□□□ -1.08
TSC2-220ENST00000568238 C15orf56Q8N910 161 aa8.28□□□□□ -1.08
TSC2-220ENST00000568238 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
TSC2-220ENST00000568238 ATP5LO75964 103 aa8.27□□□□□ -1.09
TSC2-220ENST00000568238 PMVKQ15126 192 aa8.27□□□□□ -1.09
TSC2-220ENST00000568238 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.27□□□□□ -1.09
TSC2-220ENST00000568238 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.26□□□□□ -1.09
TSC2-220ENST00000568238 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
TSC2-220ENST00000568238 A0A0J9YXV3 536 aa8.26□□□□□ -1.09
TSC2-220ENST00000568238 RPL37AP61513 92 aaKnown RBP8.26□□□□□ -1.09
TSC2-220ENST00000568238 COX6A2Q02221 97 aa8.26□□□□□ -1.09
TSC2-220ENST00000568238 IGHV3-64A0A075B6Q5 118 aa8.25□□□□□ -1.09
TSC2-220ENST00000568238 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
TSC2-220ENST00000568238 SDIM1Q6ZPB5 146 aa8.25□□□□□ -1.09
TSC2-220ENST00000568238 IFI27L1Q96BM0 104 aa8.25□□□□□ -1.09
TSC2-220ENST00000568238 GEMIN7Q9H840 131 aaKnown RBP8.25□□□□□ -1.09
TSC2-220ENST00000568238 GVQW2A0A096LPI5 108 aaPredicted RBP8.24□□□□□ -1.09
TSC2-220ENST00000568238 PANO1I0J062 215 aa8.24□□□□□ -1.09
TSC2-220ENST00000568238 FABP4P15090 132 aa8.24□□□□□ -1.09
TSC2-220ENST00000568238 LINC00526Q96FQ7 95 aa8.24□□□□□ -1.09
TSC2-220ENST00000568238 A0A087WZ39 114 aa8.23□□□□□ -1.09
TSC2-220ENST00000568238 H0Y8G0 127 aa8.23□□□□□ -1.09
TSC2-220ENST00000568238 LEPROTL1O95214 131 aa8.23□□□□□ -1.09
TSC2-220ENST00000568238 HERVK_113P63121 156 aa8.23□□□□□ -1.09
TSC2-220ENST00000568238 SEC11AP67812 179 aa8.23□□□□□ -1.09
TSC2-220ENST00000568238 CIRBPQ14011 172 aaKnown RBP8.23□□□□□ -1.09
TSC2-220ENST00000568238 FAM19A3Q7Z5A8 133 aa8.23□□□□□ -1.09
TSC2-220ENST00000568238 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
TSC2-220ENST00000568238 HMCN2Q8NDA2 5059 aa8.22□□□□□ -1.09
TSC2-220ENST00000568238 TINCRA0A1B0GVN0 87 aa8.22□□□□□ -1.09
TSC2-220ENST00000568238 APOMO95445 188 aa8.22□□□□□ -1.09
TSC2-220ENST00000568238 OXTP01178 125 aa8.22□□□□□ -1.09
TSC2-220ENST00000568238 SLPIP03973 132 aa8.22□□□□□ -1.09
TSC2-220ENST00000568238 SPAG11BQ08648 103 aa8.22□□□□□ -1.09
TSC2-220ENST00000568238 ORAOV1Q8WV07 137 aa8.22□□□□□ -1.09
TSC2-220ENST00000568238 CDKN2A-AS1Q9UH64 79 aa8.22□□□□□ -1.09
TSC2-220ENST00000568238 HSPB8Q9UJY1 196 aa8.22□□□□□ -1.09
TSC2-220ENST00000568238 IGLV4-69A0A075B6H9 119 aa8.21□□□□□ -1.1
TSC2-220ENST00000568238 ZNF561-AS1K7EIQ3 104 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms