RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 ZNF22P17026 224 aaPredicted RBP3.95□□□□□ -1.78
SF3B3-210ENST00000567654 G0S2P27469 103 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 GAGE6Q13070 117 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 NFE4Q86UQ8 179 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 PRADC1Q9BSG0 188 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 CHAC1Q9BUX1 264 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 GTSF1LQ9H1H1 148 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 SPANXA1Q9NS26 97 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 PRO0255Q9UI72 69 aa3.95□□□□□ -1.78
SF3B3-210ENST00000567654 CSMD3Q7Z407 3707 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 IGLV4-60A0A075B6I1 120 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 IGHV3-64A0A075B6Q5 118 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 TRBV6-8A0A0A6YYG3 113 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 TMEM223A0PJW6 202 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 E9PLD3 99 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 F5H768 121 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 ATP5G1P05496 136 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 HINT1P49773 126 aaPredicted RBP3.94□□□□□ -1.78
SF3B3-210ENST00000567654 UBE2D1P51668 147 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 MRPS36P82909 103 aaKnown RBP3.94□□□□□ -1.78
SF3B3-210ENST00000567654 COX6A2Q02221 97 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 BATFQ16520 125 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 Q6ZTC4 211 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 MRPL52Q86TS9 123 aaKnown RBP3.94□□□□□ -1.78
SF3B3-210ENST00000567654 ATP6V0E2Q8NHE4 81 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 MRAPQ8TCY5 172 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 PLEKHB2Q96CS7 222 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 TMEM243Q9BU79 118 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 TIMM21Q9BVV7 248 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 VCX2Q9H322 139 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 C11orf68Q9H3H3 251 aaKnown RBP3.94□□□□□ -1.78
SF3B3-210ENST00000567654 CDC42SE2Q9NRR3 84 aa3.94□□□□□ -1.78
SF3B3-210ENST00000567654 MRPS16Q9Y3D3 137 aaKnown RBP3.94□□□□□ -1.78
SF3B3-210ENST00000567654 VPS13DQ5THJ4 4388 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 TRBV25-1A0A075B6N4 114 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 TRAV8-3A0A0A6YYJ7 113 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 TRAV8-6A0A0B4J262 113 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 M0R143 59 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 DLEU1O43261 78 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 NANOS2P60321 138 aaKnown RBP3.93□□□□□ -1.78
SF3B3-210ENST00000567654 MPV17L2Q567V2 206 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 TMEM170BQ5T4T1 132 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 Q6ZVH6 145 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 PRR26Q8N8Z3 221 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 TM2D3Q9BRN9 247 aa3.93□□□□□ -1.78
SF3B3-210ENST00000567654 A0A1B0GV90 55 aa3.92□□□□□ -1.78
SF3B3-210ENST00000567654 TINCRA0A1B0GVN0 87 aa3.92□□□□□ -1.78
SF3B3-210ENST00000567654 UBE2L6O14933 153 aa3.92□□□□□ -1.78
SF3B3-210ENST00000567654 BVES-AS1Q5T3Y7 98 aa3.92□□□□□ -1.78
SF3B3-210ENST00000567654 LINC00242Q5T6M2 205 aa3.92□□□□□ -1.78
SF3B3-210ENST00000567654 FAM19A3Q7Z5A8 133 aa3.92□□□□□ -1.78
SF3B3-210ENST00000567654 C2orf88Q9BSF0 95 aa3.92□□□□□ -1.78
SF3B3-210ENST00000567654 CHCHD5Q9BSY4 110 aa3.92□□□□□ -1.78
SF3B3-210ENST00000567654 CDKN2A-AS1Q9UH64 79 aa3.92□□□□□ -1.78
SF3B3-210ENST00000567654 CSDC2Q9Y534 153 aaKnown RBP3.92□□□□□ -1.78
SF3B3-210ENST00000567654 MGAM2Q2M2H8 2515 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 IGLV5-45A0A087WSX0 123 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 TRAV13-1A0A0B4J241 112 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 IGKV3OR2-268A0A0C4DH90 116 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 MYMXA0A1B0GTQ4 84 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 K7EP13 123 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 SPINK8P0C7L1 97 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 DEFB121Q5J5C9 76 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 PAPPA-AS1Q5QFB9 102 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 AMMECR1LQ6DCA0 310 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 CLPSL2Q6UWE3 100 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 OR5A1Q8NGJ0 315 aa3.91□□□□□ -1.78
SF3B3-210ENST00000567654 ZNF815PA8K554 130 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 H7C423 109 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 J3QQQ9 107 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 LEPROTO15243 131 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 SIVA1O15304 175 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 IGHV3-30-3P0DP02 117 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 ZNF25P17030 456 aaPredicted RBP3.9□□□□□ -1.79
SF3B3-210ENST00000567654 HERVK_113P61574 105 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 RBX1P62877 108 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 TMEM97Q5BJF2 176 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 LINC00469Q8N7U9 141 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 HIGD1BQ9P298 99 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 ICOSQ9Y6W8 199 aa3.9□□□□□ -1.79
SF3B3-210ENST00000567654 DNAH6Q9C0G6 4158 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 IGHV1-58A0A0C4DH39 117 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 TEX48A0A1B0GUV7 120 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 SMIM1B2RUZ4 78 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 FXYD2P54710 66 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 HSD52Q0P140 79 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
SF3B3-210ENST00000567654 SERTAD4-AS1Q5TG53 156 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 LYPD5Q6UWN5 251 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 WFDC10BQ8IUB3 73 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 C10orf126Q8N4M7 172 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 C11orf45Q8TAV5 145 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 TMEM101Q96IK0 257 aa3.89□□□□□ -1.79
SF3B3-210ENST00000567654 DEFB131BA0A096LNP1 70 aa3.88□□□□□ -1.79
SF3B3-210ENST00000567654 LINC00959A0A1B0GUT2 108 aa3.88□□□□□ -1.79
SF3B3-210ENST00000567654 A0A1B0GUV1 79 aa3.88□□□□□ -1.79
SF3B3-210ENST00000567654 TMEM262E9PQX1 116 aa3.88□□□□□ -1.79
SF3B3-210ENST00000567654 TAX1BP3O14907 124 aa3.88□□□□□ -1.79
SF3B3-210ENST00000567654 LGALS3P17931 250 aaKnown RBP3.88□□□□□ -1.79
SF3B3-210ENST00000567654 HERVK_113P63121 156 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms