RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 TEX43Q6ZNM6 134 aa13.91□□□□□ -0.18
NME3-210ENST00000567271 SCXQ7RTU7 201 aa13.91□□□□□ -0.18
NME3-210ENST00000567271 IGHV3OR16-9A0A0B4J2B5 98 aa13.9□□□□□ -0.18
NME3-210ENST00000567271 LINC00526Q96FQ7 95 aa13.9□□□□□ -0.18
NME3-210ENST00000567271 VCX2Q9H322 139 aa13.9□□□□□ -0.18
NME3-210ENST00000567271 EPM2AB3EWF7 344 aa13.89□□□□□ -0.19
NME3-210ENST00000567271 ZNF561-AS1K7EIQ3 104 aa13.89□□□□□ -0.19
NME3-210ENST00000567271 Q6ZN92 141 aa13.89□□□□□ -0.19
NME3-210ENST00000567271 FA2HQ7L5A8 372 aa13.89□□□□□ -0.19
NME3-210ENST00000567271 CBLN2Q8IUK8 224 aa13.89□□□□□ -0.19
NME3-210ENST00000567271 AMELXQ99217 191 aa13.89□□□□□ -0.19
NME3-210ENST00000567271 SMCO4Q9NRQ5 59 aa13.89□□□□□ -0.19
NME3-210ENST00000567271 LINC00242Q5T6M2 205 aa13.88□□□□□ -0.19
NME3-210ENST00000567271 ZC2HC1BQ5TFG8 222 aa13.88□□□□□ -0.19
NME3-210ENST00000567271 LINC00173Q6ZV60 143 aa13.88□□□□□ -0.19
NME3-210ENST00000567271 CIRBP-AS1Q8TBR5 109 aa13.88□□□□□ -0.19
NME3-210ENST00000567271 TIMM17AQ99595 171 aa13.88□□□□□ -0.19
NME3-210ENST00000567271 C2orf88Q9BSF0 95 aa13.88□□□□□ -0.19
NME3-210ENST00000567271 APOMO95445 188 aa13.87□□□□□ -0.19
NME3-210ENST00000567271 UBE2D1P51668 147 aa13.87□□□□□ -0.19
NME3-210ENST00000567271 C18orf32Q8TCD1 76 aa13.87□□□□□ -0.19
NME3-210ENST00000567271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.87□□□□□ -0.19
NME3-210ENST00000567271 PANO1I0J062 215 aa13.86□□□□□ -0.19
NME3-210ENST00000567271 PAPPA-AS1Q5QFB9 102 aa13.86□□□□□ -0.19
NME3-210ENST00000567271 ERASQ7Z444 233 aa13.86□□□□□ -0.19
NME3-210ENST00000567271 IGLV4-69A0A075B6H9 119 aa13.85□□□□□ -0.19
NME3-210ENST00000567271 LINC01549A6NIU2 74 aa13.85□□□□□ -0.19
NME3-210ENST00000567271 COX6A2Q02221 97 aa13.85□□□□□ -0.19
NME3-210ENST00000567271 Q5VSD8 79 aa13.85□□□□□ -0.19
NME3-210ENST00000567271 SCGB3A1Q96QR1 104 aa13.85□□□□□ -0.19
NME3-210ENST00000567271 FAM229AH3BQW9 127 aa13.84□□□□□ -0.19
NME3-210ENST00000567271 SYCNQ0VAF6 134 aa13.84□□□□□ -0.19
NME3-210ENST00000567271 URB1-AS1Q96HZ7 61 aa13.84□□□□□ -0.19
NME3-210ENST00000567271 CIRBPQ14011 172 aaKnown RBP13.83□□□□□ -0.2
NME3-210ENST00000567271 FAM19A3Q7Z5A8 133 aa13.83□□□□□ -0.2
NME3-210ENST00000567271 OR10D4PQ8NGN7 298 aa13.83□□□□□ -0.2
NME3-210ENST00000567271 CARD19Q96LW7 228 aa13.83□□□□□ -0.2
NME3-210ENST00000567271 A0A087WZ39 114 aa13.82□□□□□ -0.2
NME3-210ENST00000567271 LINC00614P0C842 121 aa13.82□□□□□ -0.2
NME3-210ENST00000567271 C2orf48Q96LS8 159 aa13.82□□□□□ -0.2
NME3-210ENST00000567271 SPAG11BQ08648 103 aa13.81□□□□□ -0.2
NME3-210ENST00000567271 ORAOV1Q8WV07 137 aa13.81□□□□□ -0.2
NME3-210ENST00000567271 CHTF8P0CG12 524 aa13.8□□□□□ -0.2
NME3-210ENST00000567271 LINC00528Q8N1L1 170 aa13.8□□□□□ -0.2
NME3-210ENST00000567271 CAMK2N2Q96S95 79 aa13.8□□□□□ -0.2
NME3-210ENST00000567271 Q6ZRU5 148 aa13.79□□□□□ -0.2
NME3-210ENST00000567271 SPACA4Q8TDM5 124 aa13.79□□□□□ -0.2
NME3-210ENST00000567271 A0A096LNJ9 63 aa13.78□□□□□ -0.2
NME3-210ENST00000567271 RAB5BP61020 215 aa13.78□□□□□ -0.2
NME3-210ENST00000567271 LINC01561Q8N1V8 128 aa13.78□□□□□ -0.2
NME3-210ENST00000567271 SEC11AP67812 179 aa13.77□□□□□ -0.21
NME3-210ENST00000567271 DPH3Q96FX2 82 aa13.77□□□□□ -0.21
NME3-210ENST00000567271 PKIGQ9Y2B9 76 aa13.77□□□□□ -0.21
NME3-210ENST00000567271 HERVK_113P63121 156 aa13.76□□□□□ -0.21
NME3-210ENST00000567271 SRRM2Q9UQ35 2752 aaKnown RBP13.76□□□□□ -0.21
NME3-210ENST00000567271 F8WDY8 70 aa13.75□□□□□ -0.21
NME3-210ENST00000567271 CST9LQ9H4G1 147 aa13.75□□□□□ -0.21
NME3-210ENST00000567271 A0A087WYN8 130 aa13.74□□□□□ -0.21
NME3-210ENST00000567271 A0A096LNI7 61 aa13.74□□□□□ -0.21
NME3-210ENST00000567271 IGKV2-24A0A0C4DH68 120 aa13.74□□□□□ -0.21
NME3-210ENST00000567271 A0A0J9YXV3 536 aa13.74□□□□□ -0.21
NME3-210ENST00000567271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.74□□□□□ -0.21
NME3-210ENST00000567271 HBDP02042 147 aa13.74□□□□□ -0.21
NME3-210ENST00000567271 KIAA0087Q14695 138 aa13.74□□□□□ -0.21
NME3-210ENST00000567271 PMCHL1Q16048 86 aa13.74□□□□□ -0.21
NME3-210ENST00000567271 COLCA2A8K830 154 aa13.73□□□□□ -0.21
NME3-210ENST00000567271 TRGC2P03986 189 aa13.73□□□□□ -0.21
NME3-210ENST00000567271 PLA2G1BP04054 148 aaKnown RBP13.73□□□□□ -0.21
NME3-210ENST00000567271 PMVKQ15126 192 aa13.73□□□□□ -0.21
NME3-210ENST00000567271 RNF151Q2KHN1 245 aa13.73□□□□□ -0.21
NME3-210ENST00000567271 MAJINQ3KP22 176 aa13.73□□□□□ -0.21
NME3-210ENST00000567271 GEMIN7Q9H840 131 aaKnown RBP13.73□□□□□ -0.21
NME3-210ENST00000567271 PDZD11Q5EBL8 140 aa13.72□□□□□ -0.21
NME3-210ENST00000567271 MRPL35Q9NZE8 188 aaKnown RBP13.72□□□□□ -0.21
NME3-210ENST00000567271 PLAC8Q9NZF1 115 aa13.72□□□□□ -0.21
NME3-210ENST00000567271 CDKN2A-AS1Q9UH64 79 aa13.72□□□□□ -0.21
NME3-210ENST00000567271 LOC107984640A0A0U1RRK4 108 aa13.71□□□□□ -0.21
NME3-210ENST00000567271 TINCRA0A1B0GVN0 87 aa13.71□□□□□ -0.21
NME3-210ENST00000567271 NDUFA1O15239 70 aa13.71□□□□□ -0.21
NME3-210ENST00000567271 INAFM2P0DMQ5 153 aa13.71□□□□□ -0.21
NME3-210ENST00000567271 CHCHD1Q96BP2 118 aaKnown RBP13.71□□□□□ -0.21
NME3-210ENST00000567271 LINC00474Q9P2X8 69 aa13.71□□□□□ -0.21
NME3-210ENST00000567271 C10orf25Q5T742 122 aa13.7□□□□□ -0.22
NME3-210ENST00000567271 UNQ6190/PRO20217Q6UXQ8 127 aa13.7□□□□□ -0.22
NME3-210ENST00000567271 PTTG1IPP53801 180 aa13.68□□□□□ -0.22
NME3-210ENST00000567271 LINC00469Q8N7U9 141 aa13.68□□□□□ -0.22
NME3-210ENST00000567271 STPG4Q8N801 248 aa13.68□□□□□ -0.22
NME3-210ENST00000567271 IGLV5-45A0A087WSX0 123 aa13.67□□□□□ -0.22
NME3-210ENST00000567271 ATP5LO75964 103 aa13.67□□□□□ -0.22
NME3-210ENST00000567271 KRTAP10-4P60372 401 aaPredicted RBP13.67□□□□□ -0.22
NME3-210ENST00000567271 GAGE2BQ13066 116 aa13.67□□□□□ -0.22
NME3-210ENST00000567271 PACRGQ96M98 296 aaPredicted RBP13.67□□□□□ -0.22
NME3-210ENST00000567271 C6orf48Q9UBA6 75 aa13.67□□□□□ -0.22
NME3-210ENST00000567271 NDUFA6P56556 154 aa13.66□□□□□ -0.22
NME3-210ENST00000567271 C2orf82Q6UX34 121 aa13.66□□□□□ -0.22
NME3-210ENST00000567271 BAGE3Q86Y29 109 aa13.66□□□□□ -0.22
NME3-210ENST00000567271 SCO1O75880 301 aa13.65□□□□□ -0.22
NME3-210ENST00000567271 PRSS2P07478 247 aa13.65□□□□□ -0.22
NME3-210ENST00000567271 Q8IZM0 81 aa13.65□□□□□ -0.22
NME3-210ENST00000567271 TOMM7Q9P0U1 55 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 235.5 ms