RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 UBE2D1P51668 147 aa13.65□□□□□ -0.22
SHCBP1-205ENST00000566016 MALP21145 153 aa13.64□□□□□ -0.23
SHCBP1-205ENST00000566016 HIGD2BQ4VC39 106 aa13.64□□□□□ -0.23
SHCBP1-205ENST00000566016 LINC00242Q5T6M2 205 aa13.64□□□□□ -0.23
SHCBP1-205ENST00000566016 SLPIP03973 132 aa13.63□□□□□ -0.23
SHCBP1-205ENST00000566016 LINC01620Q4KN68 170 aa13.63□□□□□ -0.23
SHCBP1-205ENST00000566016 FAM19A3Q7Z5A8 133 aa13.63□□□□□ -0.23
SHCBP1-205ENST00000566016 A0A096LNJ9 63 aa13.62□□□□□ -0.23
SHCBP1-205ENST00000566016 APOMO95445 188 aa13.62□□□□□ -0.23
SHCBP1-205ENST00000566016 TRGC2P03986 189 aa13.62□□□□□ -0.23
SHCBP1-205ENST00000566016 XGP55808 180 aa13.62□□□□□ -0.23
SHCBP1-205ENST00000566016 HBDP02042 147 aa13.61□□□□□ -0.23
SHCBP1-205ENST00000566016 C5orf38Q86SI9 138 aa13.61□□□□□ -0.23
SHCBP1-205ENST00000566016 SEC11AP67812 179 aa13.61□□□□□ -0.23
SHCBP1-205ENST00000566016 CHCHD1Q96BP2 118 aaKnown RBP13.61□□□□□ -0.23
SHCBP1-205ENST00000566016 DNAH8Q96JB1 4490 aa13.6□□□□□ -0.23
SHCBP1-205ENST00000566016 A0A087WZ39 114 aa13.6□□□□□ -0.23
SHCBP1-205ENST00000566016 ZC2HC1BQ5TFG8 222 aa13.6□□□□□ -0.23
SHCBP1-205ENST00000566016 FAM30AQ9NZY2 134 aa13.6□□□□□ -0.23
SHCBP1-205ENST00000566016 ZNF561-AS1K7EIQ3 104 aa13.59□□□□□ -0.23
SHCBP1-205ENST00000566016 OR10D4PQ8NGN7 298 aa13.59□□□□□ -0.23
SHCBP1-205ENST00000566016 IGHV3-64A0A075B6Q5 118 aa13.58□□□□□ -0.24
SHCBP1-205ENST00000566016 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.58□□□□□ -0.24
SHCBP1-205ENST00000566016 LINC01561Q8N1V8 128 aa13.58□□□□□ -0.24
SHCBP1-205ENST00000566016 SCO1O75880 301 aa13.57□□□□□ -0.24
SHCBP1-205ENST00000566016 COX6A2Q02221 97 aa13.57□□□□□ -0.24
SHCBP1-205ENST00000566016 SDIM1Q6ZPB5 146 aa13.57□□□□□ -0.24
SHCBP1-205ENST00000566016 HERVK_113P63121 156 aa13.56□□□□□ -0.24
SHCBP1-205ENST00000566016 PDZD11Q5EBL8 140 aa13.56□□□□□ -0.24
SHCBP1-205ENST00000566016 C2orf48Q96LS8 159 aa13.55□□□□□ -0.24
SHCBP1-205ENST00000566016 SPAG11BQ08648 103 aa13.55□□□□□ -0.24
SHCBP1-205ENST00000566016 PMVKQ15126 192 aa13.55□□□□□ -0.24
SHCBP1-205ENST00000566016 PMCHL1Q16048 86 aa13.55□□□□□ -0.24
SHCBP1-205ENST00000566016 CST9LQ9H4G1 147 aa13.55□□□□□ -0.24
SHCBP1-205ENST00000566016 IGLV4-69A0A075B6H9 119 aa13.54□□□□□ -0.24
SHCBP1-205ENST00000566016 F8WDY8 70 aa13.54□□□□□ -0.24
SHCBP1-205ENST00000566016 ATP5LO75964 103 aa13.54□□□□□ -0.24
SHCBP1-205ENST00000566016 SYCNQ0VAF6 134 aa13.54□□□□□ -0.24
SHCBP1-205ENST00000566016 BAGE3Q86Y29 109 aa13.54□□□□□ -0.24
SHCBP1-205ENST00000566016 ORAOV1Q8WV07 137 aa13.54□□□□□ -0.24
SHCBP1-205ENST00000566016 LINC00526Q96FQ7 95 aa13.54□□□□□ -0.24
SHCBP1-205ENST00000566016 CARD19Q96LW7 228 aa13.54□□□□□ -0.24
SHCBP1-205ENST00000566016 CHAC1Q9BUX1 264 aa13.54□□□□□ -0.24
SHCBP1-205ENST00000566016 GEMIN7Q9H840 131 aaKnown RBP13.53□□□□□ -0.24
SHCBP1-205ENST00000566016 PKIGQ9Y2B9 76 aa13.53□□□□□ -0.24
SHCBP1-205ENST00000566016 CIRBPQ14011 172 aaKnown RBP13.52□□□□□ -0.25
SHCBP1-205ENST00000566016 Q8N1X5 172 aa13.52□□□□□ -0.25
SHCBP1-205ENST00000566016 TINCRA0A1B0GVN0 87 aa13.51□□□□□ -0.25
SHCBP1-205ENST00000566016 S100A1P23297 94 aa13.51□□□□□ -0.25
SHCBP1-205ENST00000566016 IGLV5-45A0A087WSX0 123 aa13.5□□□□□ -0.25
SHCBP1-205ENST00000566016 A0A0J9YXV3 536 aa13.5□□□□□ -0.25
SHCBP1-205ENST00000566016 HSBP1O75506 76 aa13.5□□□□□ -0.25
SHCBP1-205ENST00000566016 SCXQ7RTU7 201 aa13.5□□□□□ -0.25
SHCBP1-205ENST00000566016 CAMK2N2Q96S95 79 aa13.5□□□□□ -0.25
SHCBP1-205ENST00000566016 HAMPP81172 84 aa13.49□□□□□ -0.25
SHCBP1-205ENST00000566016 CDKN2A-AS1Q9UH64 79 aa13.49□□□□□ -0.25
SHCBP1-205ENST00000566016 Q6ZRU5 148 aa13.48□□□□□ -0.25
SHCBP1-205ENST00000566016 SERF1AO75920 110 aa13.48□□□□□ -0.25
SHCBP1-205ENST00000566016 LINC00310P59036 64 aa13.48□□□□□ -0.25
SHCBP1-205ENST00000566016 KIAA0087Q14695 138 aa13.48□□□□□ -0.25
SHCBP1-205ENST00000566016 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.48□□□□□ -0.25
SHCBP1-205ENST00000566016 RNF151Q2KHN1 245 aa13.47□□□□□ -0.25
SHCBP1-205ENST00000566016 LINC00469Q8N7U9 141 aa13.47□□□□□ -0.25
SHCBP1-205ENST00000566016 CIRBP-AS1Q8TBR5 109 aa13.47□□□□□ -0.25
SHCBP1-205ENST00000566016 KRTAP17-1Q9BYP8 105 aa13.47□□□□□ -0.25
SHCBP1-205ENST00000566016 MRPL35Q9NZE8 188 aaKnown RBP13.47□□□□□ -0.25
SHCBP1-205ENST00000566016 NDUFA1O15239 70 aa13.46□□□□□ -0.25
SHCBP1-205ENST00000566016 ATP6V1G1O75348 118 aa13.46□□□□□ -0.25
SHCBP1-205ENST00000566016 IGLC3P0DOY3 106 aa13.46□□□□□ -0.25
SHCBP1-205ENST00000566016 SPACA4Q8TDM5 124 aa13.46□□□□□ -0.25
SHCBP1-205ENST00000566016 PACRGQ96M98 296 aaPredicted RBP13.46□□□□□ -0.25
SHCBP1-205ENST00000566016 PANO1I0J062 215 aa13.45□□□□□ -0.26
SHCBP1-205ENST00000566016 Q8IZM0 81 aa13.44□□□□□ -0.26
SHCBP1-205ENST00000566016 FAM19A2Q8N3H0 131 aa13.44□□□□□ -0.26
SHCBP1-205ENST00000566016 IFI27L1Q96BM0 104 aa13.44□□□□□ -0.26
SHCBP1-205ENST00000566016 FAT1Q14517 4588 aa13.44□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST1H2BKO60814 126 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST1H2BJP06899 126 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST1H2BOP23527 126 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST1H2BBP33778 126 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 NDUFA6P56556 154 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST1H2BDP58876 126 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST1H2BCP62807 126 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST2H2BEQ16778 126 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST1H2BHQ93079 126 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST1H2BNQ99877 126 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 HIST1H2BMQ99879 126 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 LINC00474Q9P2X8 69 aa13.43□□□□□ -0.26
SHCBP1-205ENST00000566016 SMIM1B2RUZ4 78 aa13.42□□□□□ -0.26
SHCBP1-205ENST00000566016 TRAV12-1A0A0B4J245 112 aa13.42□□□□□ -0.26
SHCBP1-205ENST00000566016 LOC107984640A0A0U1RRK4 108 aa13.42□□□□□ -0.26
SHCBP1-205ENST00000566016 PRSS2P07478 247 aa13.42□□□□□ -0.26
SHCBP1-205ENST00000566016 CHTF8P0CG12 524 aa13.42□□□□□ -0.26
SHCBP1-205ENST00000566016 A0A096LNI7 61 aa13.41□□□□□ -0.26
SHCBP1-205ENST00000566016 H3BRM9 83 aa13.41□□□□□ -0.26
SHCBP1-205ENST00000566016 SMR3BP02814 79 aaPredicted RBP13.41□□□□□ -0.26
SHCBP1-205ENST00000566016 TRBV30A0A0K0K1B3 111 aa13.4□□□□□ -0.26
SHCBP1-205ENST00000566016 EPM2AB3EWF7 344 aa13.4□□□□□ -0.26
SHCBP1-205ENST00000566016 UNQ6190/PRO20217Q6UXQ8 127 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms