RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 GAGE5Q13069 117 aa8.69□□□□□ -1.02
SF3B3-206ENST00000565990 COTL1Q14019 142 aa8.69□□□□□ -1.02
SF3B3-206ENST00000565990 GAGE13Q4V321 117 aa8.69□□□□□ -1.02
SF3B3-206ENST00000565990 ATP6V0E2Q8NHE4 81 aa8.69□□□□□ -1.02
SF3B3-206ENST00000565990 RPL36ALQ969Q0 106 aaKnown RBP8.69□□□□□ -1.02
SF3B3-206ENST00000565990 VPS13DQ5THJ4 4388 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 TSHBP01222 138 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 CCL18P55774 89 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 RNF151Q2KHN1 245 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 C20orf203Q8NBC4 194 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 PLEKHB2Q96CS7 222 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 LYSTQ99698 3801 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 TTTY13Q9BZ97 58 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 GTSF1LQ9H1H1 148 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 LINC00588Q9Y4M8 146 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 TNFRSF18Q9Y5U5 241 aa8.68□□□□□ -1.02
SF3B3-206ENST00000565990 LEPROTO15243 131 aa8.67□□□□□ -1.02
SF3B3-206ENST00000565990 SCGB1D4Q6XE38 83 aa8.67□□□□□ -1.02
SF3B3-206ENST00000565990 DAZ4Q86SG3 579 aaKnown RBP8.67□□□□□ -1.02
SF3B3-206ENST00000565990 DAZ3Q9NR90 486 aaKnown RBP8.67□□□□□ -1.02
SF3B3-206ENST00000565990 LINC00476Q8WZB0 136 aa8.66□□□□□ -1.02
SF3B3-206ENST00000565990 UPK3BQ9BT76 320 aa8.66□□□□□ -1.02
SF3B3-206ENST00000565990 HYDINQ4G0P3 5121 aa8.66□□□□□ -1.02
SF3B3-206ENST00000565990 KMT2CQ8NEZ4 4911 aaKnown RBP8.65□□□□□ -1.02
SF3B3-206ENST00000565990 TRBV20-1A0A075B6N2 111 aa8.65□□□□□ -1.02
SF3B3-206ENST00000565990 SCGB1A1P11684 91 aa8.65□□□□□ -1.02
SF3B3-206ENST00000565990 SRSF9Q13242 221 aaKnown RBP eCLIP8.65□□□□□ -1.02
SF3B3-206ENST00000565990 VCX2Q9H322 139 aa8.65□□□□□ -1.02
SF3B3-206ENST00000565990 DNAH1Q9P2D7 4330 aa8.65□□□□□ -1.03
SF3B3-206ENST00000565990 LCE6AA0A183 80 aa8.64□□□□□ -1.03
SF3B3-206ENST00000565990 M0QXV9 152 aa8.64□□□□□ -1.03
SF3B3-206ENST00000565990 LELP1Q5T871 98 aa8.64□□□□□ -1.03
SF3B3-206ENST00000565990 NTM-AS1Q6ZSK4 140 aa8.64□□□□□ -1.03
SF3B3-206ENST00000565990 SPANXA1Q9NS26 97 aa8.64□□□□□ -1.03
SF3B3-206ENST00000565990 TMEM223A0PJW6 202 aa8.63□□□□□ -1.03
SF3B3-206ENST00000565990 J3QQQ9 107 aa8.63□□□□□ -1.03
SF3B3-206ENST00000565990 K7ERJ3 54 aa8.63□□□□□ -1.03
SF3B3-206ENST00000565990 LGALS3P17931 250 aaKnown RBP8.63□□□□□ -1.03
SF3B3-206ENST00000565990 AMELXQ99217 191 aa8.63□□□□□ -1.03
SF3B3-206ENST00000565990 TMEM238C9JI98 176 aa8.62□□□□□ -1.03
SF3B3-206ENST00000565990 LY6G6CO95867 125 aa8.62□□□□□ -1.03
SF3B3-206ENST00000565990 NAA38Q9BRA0 125 aaKnown RBP8.62□□□□□ -1.03
SF3B3-206ENST00000565990 Q9H8V8 135 aa8.62□□□□□ -1.03
SF3B3-206ENST00000565990 SACSQ9NZJ4 4579 aa8.62□□□□□ -1.03
SF3B3-206ENST00000565990 TRBV6-8A0A0A6YYG3 113 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-206ENST00000565990 A0A0B4J2C4 111 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 H3BMG7 143 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 IGHV3-30P01768 117 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 IGHV3-30-5P0DP03 117 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 RPL39P62891 51 aaKnown RBP8.61□□□□□ -1.03
SF3B3-206ENST00000565990 MRPS36P82909 103 aaKnown RBP8.61□□□□□ -1.03
SF3B3-206ENST00000565990 RPL24P83731 157 aaKnown RBP8.61□□□□□ -1.03
SF3B3-206ENST00000565990 SMAGPQ0VAQ4 97 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 TMEM170BQ5T4T1 132 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 PRO0461Q9UI25 63 aa8.61□□□□□ -1.03
SF3B3-206ENST00000565990 IGLV4-3A0A075B6K6 122 aa8.6□□□□□ -1.03
SF3B3-206ENST00000565990 UBE2DNLQ8IWF7 75 aa8.6□□□□□ -1.03
SF3B3-206ENST00000565990 C10orf126Q8N4M7 172 aa8.6□□□□□ -1.03
SF3B3-206ENST00000565990 ALMS1Q8TCU4 4167 aa8.59□□□□□ -1.03
SF3B3-206ENST00000565990 RYR2Q92736 4967 aa8.59□□□□□ -1.03
SF3B3-206ENST00000565990 ZNF22P17026 224 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-206ENST00000565990 LINC01600Q96MT4 127 aa8.59□□□□□ -1.03
SF3B3-206ENST00000565990 TINCRA0A1B0GVN0 87 aa8.58□□□□□ -1.04
SF3B3-206ENST00000565990 TIMM17BO60830 172 aa8.58□□□□□ -1.04
SF3B3-206ENST00000565990 TSPAN13O95857 204 aa8.58□□□□□ -1.04
SF3B3-206ENST00000565990 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
SF3B3-206ENST00000565990 WFDC10BQ8IUB3 73 aa8.58□□□□□ -1.04
SF3B3-206ENST00000565990 PRO1854Q9UHT4 67 aa8.58□□□□□ -1.04
SF3B3-206ENST00000565990 A0A0J9YXY3 114 aa8.57□□□□□ -1.04
SF3B3-206ENST00000565990 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
SF3B3-206ENST00000565990 PPDPFQ9H3Y8 114 aa8.57□□□□□ -1.04
SF3B3-206ENST00000565990 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
SF3B3-206ENST00000565990 KMT2AQ03164 3969 aa8.56□□□□□ -1.04
SF3B3-206ENST00000565990 TSPEAR-AS2P59090 65 aa8.56□□□□□ -1.04
SF3B3-206ENST00000565990 LINC01556Q5JQF7 62 aa8.56□□□□□ -1.04
SF3B3-206ENST00000565990 Q6ZR54 194 aa8.56□□□□□ -1.04
SF3B3-206ENST00000565990 FAM19A3Q7Z5A8 133 aa8.56□□□□□ -1.04
SF3B3-206ENST00000565990 CHCHD7Q9BUK0 85 aa8.56□□□□□ -1.04
SF3B3-206ENST00000565990 IGHV1-58A0A0C4DH39 117 aa8.55□□□□□ -1.04
SF3B3-206ENST00000565990 H7C423 109 aa8.55□□□□□ -1.04
SF3B3-206ENST00000565990 CFC1BP0CG36 223 aa8.55□□□□□ -1.04
SF3B3-206ENST00000565990 CFC1P0CG37 223 aa8.55□□□□□ -1.04
SF3B3-206ENST00000565990 IFITM1P13164 125 aa8.55□□□□□ -1.04
SF3B3-206ENST00000565990 WFDC2Q14508 124 aa8.55□□□□□ -1.04
SF3B3-206ENST00000565990 RYR3Q15413 4870 aa8.54□□□□□ -1.04
SF3B3-206ENST00000565990 IGLV5-45A0A087WSX0 123 aa8.54□□□□□ -1.04
SF3B3-206ENST00000565990 NBDYA0A0U1RRE5 68 aa8.54□□□□□ -1.04
SF3B3-206ENST00000565990 A0A1B0GUV1 79 aa8.54□□□□□ -1.04
SF3B3-206ENST00000565990 DEFB104AQ8WTQ1 72 aa8.54□□□□□ -1.04
SF3B3-206ENST00000565990 COPS9Q8WXC6 57 aa8.54□□□□□ -1.04
SF3B3-206ENST00000565990 SIGMAR1Q99720 223 aa8.54□□□□□ -1.04
SF3B3-206ENST00000565990 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
SF3B3-206ENST00000565990 CSDC2Q9Y534 153 aaKnown RBP8.54□□□□□ -1.04
SF3B3-206ENST00000565990 PPDPFLQ8WWR9 84 aa8.53□□□□□ -1.04
SF3B3-206ENST00000565990 CHCHD5Q9BSY4 110 aa8.53□□□□□ -1.04
SF3B3-206ENST00000565990 UBE2D4Q9Y2X8 147 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms