RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 CCL22O00626 93 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 LEPROTL1O95214 131 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 ACYP1P07311 99 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 ARMS2P0C7Q2 107 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 IGLC1P0CG04 106 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 COX6B1P14854 86 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 PKIAP61925 76 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 Q0VG73 95 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 PYY3Q5JQD4 70 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 PSMG4Q5JS54 123 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 MUSTN1Q8IVN3 82 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 Q96NJ1 140 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 PMCHL2Q9BQD1 86 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 V9GYS6 101 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 ABCC5O15440 1437 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 ABCC2Q92887 1545 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 SYNJ1O43426 1573 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 ERCC6L2Q5T890 1561 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 GCN1Q92616 2671 aaKnown RBP0.27□□□□□ -2.37
CHD9-211ENST00000564600 RREB1Q92766 1687 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 LAMB1P07942 1786 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 RBBP6Q7Z6E9 1792 aaKnown RBP0.27□□□□□ -2.37
CHD9-211ENST00000564600 SPEF2Q9C093 1822 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 MYH7P12883 1935 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 TCHHQ07283 1943 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 DOCK11Q5JSL3 2073 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 NBEAL2Q6ZNJ1 2754 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 TRBV25-1A0A075B6N4 114 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 A0A0G2JND7 137 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 PVALEFA0A1B0GWK0 134 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 C7orf77A4D0Y5 90 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 OOSP1A8MZH6 123 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 NDUFB1O75438 58 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 KRTAP2-3P0C7H8 128 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 WFDC2Q14508 124 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 DEFB109BQ30KR1 87 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 ETDBQ3ZM63 59 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 SERP2Q8N6R1 65 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 TSLPQ969D9 159 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 SMR3AQ99954 134 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 FAM103A1Q9BTL3 118 aaKnown RBP0.26□□□□□ -2.37
CHD9-211ENST00000564600 KRTAP2-4Q9BYR9 128 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 KRTAP2-1Q9BYU5 128 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 CACFD1Q9UGQ2 172 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 MYOM3Q5VTT5 1437 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 C10orf71Q711Q0 1435 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 CASKIN1Q8WXD9 1431 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 SCAPERQ9BY12 1400 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 MYOM2P54296 1465 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 LRRC37A2A6NM11 1700 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 NRXN2Q9P2S2 1712 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 NWD2Q9ULI1 1742 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 PLXNA1Q9UIW2 1896 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 MYH8P13535 1937 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 PI4KAP42356 2102 aa0.26□□□□□ -2.37
CHD9-211ENST00000564600 MAP1BP46821 2468 aaKnown RBP0.26□□□□□ -2.37
CHD9-211ENST00000564600 CASZ1Q86V15 1759 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 HMCN2Q8NDA2 5059 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 RAPGEF6Q8TEU7 1601 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 UNC13BO14795 1591 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 A2ML1A8K2U0 1454 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 PTPRMP28827 1452 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 hADV29S1A0JD25 119 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 LOC730098B7Z3J9 87 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 SNRPFP62306 86 aaKnown RBP0.25□□□□□ -2.37
CHD9-211ENST00000564600 PLGLAQ15195 96 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 Q5VSD8 79 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 C10orf113Q5VZT2 155 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 FAM223AQ8IWN6 122 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 LCN9Q8WX39 176 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 LSM10Q969L4 123 aaKnown RBP0.25□□□□□ -2.37
CHD9-211ENST00000564600 S100A13Q99584 98 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 CDC42SE2Q9NRR3 84 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 UBE2D4Q9Y2X8 147 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 AKAP13Q12802 2813 aa0.25□□□□□ -2.37
CHD9-211ENST00000564600 DOCK2Q92608 1830 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 WNK3Q9BYP7 1800 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 TNS1Q9HBL0 1735 aaKnown RBP0.24□□□□□ -2.37
CHD9-211ENST00000564600 ZANQ9Y493 2812 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 RIMS1Q86UR5 1692 aaKnown RBP0.24□□□□□ -2.37
CHD9-211ENST00000564600 DMBT1Q9UGM3 2413 aaPredicted RBP0.24□□□□□ -2.37
CHD9-211ENST00000564600 CLIP1P30622 1438 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 ABCA4P78363 2273 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 KIAA0100Q14667 2235 aaKnown RBP0.24□□□□□ -2.37
CHD9-211ENST00000564600 A0A087WTM6 91 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 SPTY2D1-AS1A0A0U1RR47 76 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 A0A1B0GU69 56 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 A0A1B0GUT8 65 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 LOC100130705A0A1B0GUX0 176 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 LINC00587B1AMM8 73 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 H0Y9P7 68 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 UBE2D3P61077 147 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 UBE2D2P62837 147 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 C14orf144Q96I85 54 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 SPRR4Q96PI1 79 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 CDKN2A-AS1Q9UH64 79 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 UBR5O95071 2799 aaPredicted RBP0.24□□□□□ -2.37
CHD9-211ENST00000564600 AKAP11Q9UKA4 1901 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 RYR3Q15413 4870 aa0.24□□□□□ -2.37
CHD9-211ENST00000564600 IGSF10Q6WRI0 2623 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms