RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 IGLV10-54A0A075B6I4 117 aa11.37□□□□□ -0.59
CMTM3-208ENST00000564247 IGKV2D-24A0A075B6R9 120 aa11.37□□□□□ -0.59
CMTM3-208ENST00000564247 A0A0J9YXV3 536 aa11.37□□□□□ -0.59
CMTM3-208ENST00000564247 F8VRH5 84 aa11.37□□□□□ -0.59
CMTM3-208ENST00000564247 AKR1D1P51857 326 aa11.37□□□□□ -0.59
CMTM3-208ENST00000564247 HERVK_113P63121 156 aa11.37□□□□□ -0.59
CMTM3-208ENST00000564247 ODF1Q14990 250 aa11.37□□□□□ -0.59
CMTM3-208ENST00000564247 C1orf134Q5TEV5 83 aa11.37□□□□□ -0.59
CMTM3-208ENST00000564247 MRPL35Q9NZE8 188 aaKnown RBP11.37□□□□□ -0.59
CMTM3-208ENST00000564247 TINCRA0A1B0GVN0 87 aa11.36□□□□□ -0.59
CMTM3-208ENST00000564247 XCL1P47992 114 aa11.36□□□□□ -0.59
CMTM3-208ENST00000564247 LINC00242Q5T6M2 205 aa11.36□□□□□ -0.59
CMTM3-208ENST00000564247 FAM19A3Q7Z5A8 133 aa11.36□□□□□ -0.59
CMTM3-208ENST00000564247 NFE4Q86UQ8 179 aa11.36□□□□□ -0.59
CMTM3-208ENST00000564247 CHCHD10Q8WYQ3 142 aaPredicted RBP11.36□□□□□ -0.59
CMTM3-208ENST00000564247 TM2D2Q9BX73 214 aa11.36□□□□□ -0.59
CMTM3-208ENST00000564247 COX11Q9Y6N1 276 aa11.36□□□□□ -0.59
CMTM3-208ENST00000564247 A0A1B0GVY2 172 aa11.35□□□□□ -0.59
CMTM3-208ENST00000564247 DPM2O94777 84 aa11.35□□□□□ -0.59
CMTM3-208ENST00000564247 SCGB1D1O95968 90 aa11.35□□□□□ -0.59
CMTM3-208ENST00000564247 LINC01545Q5VT33 79 aa11.35□□□□□ -0.59
CMTM3-208ENST00000564247 KRTAP1-5Q9BYS1 174 aa11.35□□□□□ -0.59
CMTM3-208ENST00000564247 IGLC3P0DOY3 106 aa11.34□□□□□ -0.59
CMTM3-208ENST00000564247 PLNP26678 52 aa11.34□□□□□ -0.59
CMTM3-208ENST00000564247 CD164L2Q6UWJ8 174 aa11.34□□□□□ -0.59
CMTM3-208ENST00000564247 PMCHL2Q9BQD1 86 aa11.34□□□□□ -0.59
CMTM3-208ENST00000564247 DYNC1H1Q14204 4646 aaKnown RBP11.33□□□□□ -0.6
CMTM3-208ENST00000564247 IGLV4-69A0A075B6H9 119 aa11.33□□□□□ -0.6
CMTM3-208ENST00000564247 GAGE12HA6NDE8 117 aa11.33□□□□□ -0.6
CMTM3-208ENST00000564247 IGKCP01834 107 aa11.33□□□□□ -0.6
CMTM3-208ENST00000564247 CHAC1Q9BUX1 264 aa11.33□□□□□ -0.6
CMTM3-208ENST00000564247 COX6A2Q02221 97 aa11.32□□□□□ -0.6
CMTM3-208ENST00000564247 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
CMTM3-208ENST00000564247 DNAH11Q96DT5 4516 aa11.31□□□□□ -0.6
CMTM3-208ENST00000564247 C11orf86A6NJI1 115 aa11.31□□□□□ -0.6
CMTM3-208ENST00000564247 H3BRM9 83 aa11.31□□□□□ -0.6
CMTM3-208ENST00000564247 PSCAO43653 123 aa11.31□□□□□ -0.6
CMTM3-208ENST00000564247 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
CMTM3-208ENST00000564247 C6orf223Q8N319 242 aa11.31□□□□□ -0.6
CMTM3-208ENST00000564247 COX7A2LO14548 114 aa11.3□□□□□ -0.6
CMTM3-208ENST00000564247 JOSD1Q15040 202 aaPredicted RBP11.3□□□□□ -0.6
CMTM3-208ENST00000564247 IGHV3OR16-9A0A0B4J2B5 98 aa11.29□□□□□ -0.6
CMTM3-208ENST00000564247 MALP21145 153 aa11.29□□□□□ -0.6
CMTM3-208ENST00000564247 FOXI1Q12951 378 aa11.29□□□□□ -0.6
CMTM3-208ENST00000564247 C5orf38Q86SI9 138 aa11.29□□□□□ -0.6
CMTM3-208ENST00000564247 CDKN2A-AS1Q9UH64 79 aa11.29□□□□□ -0.6
CMTM3-208ENST00000564247 IGLV5-45A0A087WSX0 123 aa11.28□□□□□ -0.6
CMTM3-208ENST00000564247 LOC105371267A0A1B0GV96 52 aa11.28□□□□□ -0.6
CMTM3-208ENST00000564247 ZNF22P17026 224 aaPredicted RBP11.28□□□□□ -0.6
CMTM3-208ENST00000564247 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
CMTM3-208ENST00000564247 LINC01561Q8N1V8 128 aa11.28□□□□□ -0.6
CMTM3-208ENST00000564247 A0A087WZ39 114 aa11.27□□□□□ -0.61
CMTM3-208ENST00000564247 APOMO95445 188 aa11.27□□□□□ -0.61
CMTM3-208ENST00000564247 HERVK_113P61574 105 aa11.26□□□□□ -0.61
CMTM3-208ENST00000564247 CFAP161Q6P656 301 aa11.26□□□□□ -0.61
CMTM3-208ENST00000564247 ATOH7Q8N100 152 aa11.25□□□□□ -0.61
CMTM3-208ENST00000564247 HSBP1L1C9JCN9 74 aa11.24□□□□□ -0.61
CMTM3-208ENST00000564247 TNP2Q05952 138 aa11.24□□□□□ -0.61
CMTM3-208ENST00000564247 HERC2O95714 4834 aa11.23□□□□□ -0.61
CMTM3-208ENST00000564247 KIAA1109Q2LD37 5005 aa11.23□□□□□ -0.61
CMTM3-208ENST00000564247 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
CMTM3-208ENST00000564247 TMEM223A0PJW6 202 aa11.23□□□□□ -0.61
CMTM3-208ENST00000564247 SPINK8P0C7L1 97 aa11.23□□□□□ -0.61
CMTM3-208ENST00000564247 PYY3Q5JQD4 70 aa11.22□□□□□ -0.61
CMTM3-208ENST00000564247 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.61
CMTM3-208ENST00000564247 STPG4Q8N801 248 aa11.21□□□□□ -0.61
CMTM3-208ENST00000564247 MAPKAPK5-AS1Q8N8E1 139 aa11.21□□□□□ -0.61
CMTM3-208ENST00000564247 SMIM1B2RUZ4 78 aa11.2□□□□□ -0.62
CMTM3-208ENST00000564247 PRSS2P07478 247 aa11.2□□□□□ -0.62
CMTM3-208ENST00000564247 Q6ZRN7 208 aaPredicted RBP11.2□□□□□ -0.62
CMTM3-208ENST00000564247 ORAOV1Q8WV07 137 aa11.2□□□□□ -0.62
CMTM3-208ENST00000564247 TOMM7Q9P0U1 55 aa11.19□□□□□ -0.62
CMTM3-208ENST00000564247 hDV102S1A0JD36 115 aa11.18□□□□□ -0.62
CMTM3-208ENST00000564247 USP17L23D6RBM5 183 aa11.18□□□□□ -0.62
CMTM3-208ENST00000564247 ZNF561-AS1K7EIQ3 104 aa11.18□□□□□ -0.62
CMTM3-208ENST00000564247 LEPROTO15243 131 aa11.18□□□□□ -0.62
CMTM3-208ENST00000564247 C14orf177Q52M58 125 aa11.18□□□□□ -0.62
CMTM3-208ENST00000564247 C6orf226Q5I0X4 101 aa11.18□□□□□ -0.62
CMTM3-208ENST00000564247 PLEKHB2Q96CS7 222 aa11.18□□□□□ -0.62
CMTM3-208ENST00000564247 VAMP8Q9BV40 100 aa11.18□□□□□ -0.62
CMTM3-208ENST00000564247 IGLV5-39A0A0G2JS06 123 aa11.17□□□□□ -0.62
CMTM3-208ENST00000564247 E9PLD3 99 aa11.17□□□□□ -0.62
CMTM3-208ENST00000564247 S100A12P80511 92 aa11.17□□□□□ -0.62
CMTM3-208ENST00000564247 COX7B2Q8TF08 81 aa11.17□□□□□ -0.62
CMTM3-208ENST00000564247 LECT2O14960 151 aa11.16□□□□□ -0.62
CMTM3-208ENST00000564247 SPAG11BQ08648 103 aa11.16□□□□□ -0.62
CMTM3-208ENST00000564247 Q8IZM0 81 aa11.16□□□□□ -0.62
CMTM3-208ENST00000564247 C15orf56Q8N910 161 aa11.16□□□□□ -0.62
CMTM3-208ENST00000564247 LRP1BQ9NZR2 4599 aa11.16□□□□□ -0.62
CMTM3-208ENST00000564247 GVQW2A0A096LPI5 108 aaPredicted RBP11.15□□□□□ -0.62
CMTM3-208ENST00000564247 EREGO14944 169 aa11.15□□□□□ -0.62
CMTM3-208ENST00000564247 SMIM6P0DI80 62 aa11.15□□□□□ -0.62
CMTM3-208ENST00000564247 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.62
CMTM3-208ENST00000564247 MAJINQ3KP22 176 aa11.15□□□□□ -0.62
CMTM3-208ENST00000564247 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
CMTM3-208ENST00000564247 CKS1BP61024 79 aa11.14□□□□□ -0.63
CMTM3-208ENST00000564247 ANKRD39Q53RE8 183 aa11.14□□□□□ -0.63
CMTM3-208ENST00000564247 LRCOL1A6NCL2 159 aa11.13□□□□□ -0.63
CMTM3-208ENST00000564247 J3QQQ9 107 aa11.13□□□□□ -0.63
CMTM3-208ENST00000564247 NMUP48645 174 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms