RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 LINC01546A6NGU7 62 aa12.98□□□□□ -0.33
CMTM3-206ENST00000563672 IGIPA6NJ69 53 aa12.98□□□□□ -0.33
CMTM3-206ENST00000563672 NPSP0C0P6 89 aa12.98□□□□□ -0.33
CMTM3-206ENST00000563672 CIRBPQ14011 172 aaKnown RBP12.98□□□□□ -0.33
CMTM3-206ENST00000563672 PRSS3P2Q8NHM4 247 aa12.98□□□□□ -0.33
CMTM3-206ENST00000563672 LINC00526Q96FQ7 95 aa12.98□□□□□ -0.33
CMTM3-206ENST00000563672 G0S2P27469 103 aa12.97□□□□□ -0.33
CMTM3-206ENST00000563672 ZNF561-AS1K7EIQ3 104 aa12.96□□□□□ -0.33
CMTM3-206ENST00000563672 LINC00528Q8N1L1 170 aa12.96□□□□□ -0.33
CMTM3-206ENST00000563672 AMELXQ99217 191 aa12.96□□□□□ -0.33
CMTM3-206ENST00000563672 TEX43Q6ZNM6 134 aa12.95□□□□□ -0.34
CMTM3-206ENST00000563672 LINC00173Q6ZV60 143 aa12.95□□□□□ -0.34
CMTM3-206ENST00000563672 TOMM6Q96B49 74 aa12.95□□□□□ -0.34
CMTM3-206ENST00000563672 YPEL4Q96NS1 127 aa12.95□□□□□ -0.34
CMTM3-206ENST00000563672 IGLV4-69A0A075B6H9 119 aa12.94□□□□□ -0.34
CMTM3-206ENST00000563672 APOMO95445 188 aa12.94□□□□□ -0.34
CMTM3-206ENST00000563672 COX6A2Q02221 97 aa12.94□□□□□ -0.34
CMTM3-206ENST00000563672 LINC00242Q5T6M2 205 aa12.94□□□□□ -0.34
CMTM3-206ENST00000563672 VCX2Q9H322 139 aa12.94□□□□□ -0.34
CMTM3-206ENST00000563672 TRAPPC1Q9Y5R8 145 aa12.94□□□□□ -0.34
CMTM3-206ENST00000563672 CHTF8P0CG12 524 aa12.93□□□□□ -0.34
CMTM3-206ENST00000563672 UBE2D1P51668 147 aa12.93□□□□□ -0.34
CMTM3-206ENST00000563672 SYCNQ0VAF6 134 aa12.93□□□□□ -0.34
CMTM3-206ENST00000563672 ZC2HC1BQ5TFG8 222 aa12.93□□□□□ -0.34
CMTM3-206ENST00000563672 Q6ZN92 141 aa12.93□□□□□ -0.34
CMTM3-206ENST00000563672 SLC7A5P1Q8MH63 180 aa12.93□□□□□ -0.34
CMTM3-206ENST00000563672 CARD19Q96LW7 228 aa12.93□□□□□ -0.34
CMTM3-206ENST00000563672 TIMM17AQ99595 171 aa12.93□□□□□ -0.34
CMTM3-206ENST00000563672 SPACA4Q8TDM5 124 aa12.92□□□□□ -0.34
CMTM3-206ENST00000563672 C2orf48Q96LS8 159 aa12.92□□□□□ -0.34
CMTM3-206ENST00000563672 C2orf88Q9BSF0 95 aa12.92□□□□□ -0.34
CMTM3-206ENST00000563672 INAFM2P0DMQ5 153 aa12.91□□□□□ -0.34
CMTM3-206ENST00000563672 OR10D4PQ8NGN7 298 aa12.91□□□□□ -0.34
CMTM3-206ENST00000563672 A0A087WZ39 114 aa12.9□□□□□ -0.34
CMTM3-206ENST00000563672 PLA2G1BP04054 148 aaKnown RBP12.9□□□□□ -0.34
CMTM3-206ENST00000563672 PAPPA-AS1Q5QFB9 102 aa12.9□□□□□ -0.34
CMTM3-206ENST00000563672 FA2HQ7L5A8 372 aa12.9□□□□□ -0.34
CMTM3-206ENST00000563672 ERASQ7Z444 233 aa12.9□□□□□ -0.34
CMTM3-206ENST00000563672 FAM19A3Q7Z5A8 133 aa12.9□□□□□ -0.34
CMTM3-206ENST00000563672 LINC01549A6NIU2 74 aa12.89□□□□□ -0.35
CMTM3-206ENST00000563672 SPAG11BQ08648 103 aa12.89□□□□□ -0.35
CMTM3-206ENST00000563672 Q6ZRU5 148 aa12.89□□□□□ -0.35
CMTM3-206ENST00000563672 SCGB3A1Q96QR1 104 aa12.89□□□□□ -0.35
CMTM3-206ENST00000563672 A0A087WYN8 130 aa12.88□□□□□ -0.35
CMTM3-206ENST00000563672 C18orf32Q8TCD1 76 aa12.88□□□□□ -0.35
CMTM3-206ENST00000563672 ORAOV1Q8WV07 137 aa12.88□□□□□ -0.35
CMTM3-206ENST00000563672 DPH3Q96FX2 82 aa12.88□□□□□ -0.35
CMTM3-206ENST00000563672 CAMK2N2Q96S95 79 aa12.88□□□□□ -0.35
CMTM3-206ENST00000563672 URB1-AS1Q96HZ7 61 aa12.87□□□□□ -0.35
CMTM3-206ENST00000563672 SMCO4Q9NRQ5 59 aa12.87□□□□□ -0.35
CMTM3-206ENST00000563672 PLAC8Q9NZF1 115 aa12.87□□□□□ -0.35
CMTM3-206ENST00000563672 PKIGQ9Y2B9 76 aa12.87□□□□□ -0.35
CMTM3-206ENST00000563672 A0A096LNI7 61 aa12.86□□□□□ -0.35
CMTM3-206ENST00000563672 KRTAP10-4P60372 401 aaPredicted RBP12.86□□□□□ -0.35
CMTM3-206ENST00000563672 LINC01561Q8N1V8 128 aa12.86□□□□□ -0.35
CMTM3-206ENST00000563672 IGKV2-24A0A0C4DH68 120 aa12.85□□□□□ -0.35
CMTM3-206ENST00000563672 F8WDY8 70 aa12.85□□□□□ -0.35
CMTM3-206ENST00000563672 CBLN2Q8IUK8 224 aa12.85□□□□□ -0.35
CMTM3-206ENST00000563672 LINC00614P0C842 121 aa12.84□□□□□ -0.35
CMTM3-206ENST00000563672 MAJINQ3KP22 176 aa12.84□□□□□ -0.35
CMTM3-206ENST00000563672 SEC11AP67812 179 aa12.83□□□□□ -0.36
CMTM3-206ENST00000563672 KIAA0087Q14695 138 aa12.83□□□□□ -0.36
CMTM3-206ENST00000563672 RNF151Q2KHN1 245 aa12.83□□□□□ -0.36
CMTM3-206ENST00000563672 LINC00474Q9P2X8 69 aa12.83□□□□□ -0.36
CMTM3-206ENST00000563672 MYCBP2O75592 4640 aa12.83□□□□□ -0.36
CMTM3-206ENST00000563672 FLG2Q5D862 2391 aaPredicted RBP12.83□□□□□ -0.36
CMTM3-206ENST00000563672 A0A096LNJ9 63 aa12.82□□□□□ -0.36
CMTM3-206ENST00000563672 LOC107984640A0A0U1RRK4 108 aa12.82□□□□□ -0.36
CMTM3-206ENST00000563672 HERVK_113P63121 156 aa12.82□□□□□ -0.36
CMTM3-206ENST00000563672 MRPL35Q9NZE8 188 aaKnown RBP12.82□□□□□ -0.36
CMTM3-206ENST00000563672 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.81□□□□□ -0.36
CMTM3-206ENST00000563672 A0A0J9YXV3 536 aa12.8□□□□□ -0.36
CMTM3-206ENST00000563672 NDUFA1O15239 70 aa12.8□□□□□ -0.36
CMTM3-206ENST00000563672 PTTG1IPP53801 180 aa12.8□□□□□ -0.36
CMTM3-206ENST00000563672 C10orf25Q5T742 122 aa12.8□□□□□ -0.36
CMTM3-206ENST00000563672 STPG4Q8N801 248 aa12.8□□□□□ -0.36
CMTM3-206ENST00000563672 CST9LQ9H4G1 147 aa12.8□□□□□ -0.36
CMTM3-206ENST00000563672 RAB5BP61020 215 aa12.79□□□□□ -0.36
CMTM3-206ENST00000563672 RPL37AP61513 92 aaKnown RBP12.79□□□□□ -0.36
CMTM3-206ENST00000563672 UNQ6190/PRO20217Q6UXQ8 127 aa12.79□□□□□ -0.36
CMTM3-206ENST00000563672 CDKN2A-AS1Q9UH64 79 aa12.79□□□□□ -0.36
CMTM3-206ENST00000563672 GEMIN7Q9H840 131 aaKnown RBP12.78□□□□□ -0.36
CMTM3-206ENST00000563672 TINCRA0A1B0GVN0 87 aa12.77□□□□□ -0.37
CMTM3-206ENST00000563672 HBDP02042 147 aa12.77□□□□□ -0.37
CMTM3-206ENST00000563672 GAGE2BQ13066 116 aa12.77□□□□□ -0.37
CMTM3-206ENST00000563672 PMVKQ15126 192 aa12.77□□□□□ -0.37
CMTM3-206ENST00000563672 PMCHL1Q16048 86 aa12.76□□□□□ -0.37
CMTM3-206ENST00000563672 PDZD11Q5EBL8 140 aa12.76□□□□□ -0.37
CMTM3-206ENST00000563672 C6orf48Q9UBA6 75 aa12.76□□□□□ -0.37
CMTM3-206ENST00000563672 IGLV5-45A0A087WSX0 123 aa12.75□□□□□ -0.37
CMTM3-206ENST00000563672 PKHD1L1Q86WI1 4243 aa12.74□□□□□ -0.37
CMTM3-206ENST00000563672 TLX1NBP0CAT3 122 aa12.74□□□□□ -0.37
CMTM3-206ENST00000563672 C2orf82Q6UX34 121 aa12.74□□□□□ -0.37
CMTM3-206ENST00000563672 LINC00469Q8N7U9 141 aa12.74□□□□□ -0.37
CMTM3-206ENST00000563672 RPL18AQ02543 176 aaKnown RBP12.73□□□□□ -0.37
CMTM3-206ENST00000563672 Q8IZM0 81 aa12.73□□□□□ -0.37
CMTM3-206ENST00000563672 CHCHD1Q96BP2 118 aaKnown RBP12.73□□□□□ -0.37
CMTM3-206ENST00000563672 PACRGQ96M98 296 aaPredicted RBP12.73□□□□□ -0.37
CMTM3-206ENST00000563672 TRBV30A0A0K0K1B3 111 aa12.72□□□□□ -0.37
CMTM3-206ENST00000563672 TRGC2P03986 189 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms