RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 C5orf38Q86SI9 138 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 STOML3Q8TAV4 291 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 TMEM101Q96IK0 257 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 IMMP2LQ96T52 175 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 ANAPC11Q9NYG5 84 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 C6orf48Q9UBA6 75 aa4.39□□□□□ -1.71
HERPUD1-206ENST00000563343 MAP1LC3B2A6NCE7 125 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 C1orf196B1AJZ1 125 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 F2Z2F3 143 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 F8WDY8 70 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 TRIAP1O43715 76 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 NUPR1O60356 82 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 GAGE2EQ4V326 116 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 C9orf129Q5T035 196 aaKnown RBP4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 LYZL1Q6UWQ5 148 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 OR2D3Q8NGH3 330 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 CNFNQ9BYD5 112 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 MAP1LC3BQ9GZQ8 125 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 GAGE2DQ9UEU5 116 aa4.38□□□□□ -1.71
HERPUD1-206ENST00000563343 KANTRA0A1W2PQU2 76 aa4.37□□□□□ -1.71
HERPUD1-206ENST00000563343 RAB19A4D1S5 217 aa4.37□□□□□ -1.71
HERPUD1-206ENST00000563343 I3L3M4 83 aa4.37□□□□□ -1.71
HERPUD1-206ENST00000563343 RPS20P60866 119 aaKnown RBP4.37□□□□□ -1.71
HERPUD1-206ENST00000563343 RPL7L1Q6DKI1 246 aaKnown RBP4.37□□□□□ -1.71
HERPUD1-206ENST00000563343 UNQ6190/PRO20217Q6UXQ8 127 aa4.37□□□□□ -1.71
HERPUD1-206ENST00000563343 TMUB2Q71RG4 321 aa4.37□□□□□ -1.71
HERPUD1-206ENST00000563343 KCNRGQ8N5I3 272 aa4.37□□□□□ -1.71
HERPUD1-206ENST00000563343 OR10D4PQ8NGN7 298 aa4.37□□□□□ -1.71
HERPUD1-206ENST00000563343 TRBV6-5A0A0K0K1A5 114 aa4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 LOC105371267A0A1B0GV96 52 aa4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 SMLR1H3BR10 107 aa4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 ARPC5O15511 151 aa4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 CTRLP40313 264 aa4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 TMEM241Q24JQ0 296 aa4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 RNASE13Q5GAN3 156 aaKnown RBP4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 MRAP2Q96G30 205 aa4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 RNASE7Q9H1E1 156 aaKnown RBP4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 TMEM242Q9NWH2 141 aa4.36□□□□□ -1.71
HERPUD1-206ENST00000563343 FXYD6-FXYD2A0A087WZ82 144 aa4.35□□□□□ -1.71
HERPUD1-206ENST00000563343 NDUFA1O15239 70 aa4.35□□□□□ -1.71
HERPUD1-206ENST00000563343 PMCHP20382 165 aa4.35□□□□□ -1.71
HERPUD1-206ENST00000563343 FOXA3P55318 350 aaPredicted RBP4.35□□□□□ -1.71
HERPUD1-206ENST00000563343 SEC61BP60468 96 aaKnown RBP4.35□□□□□ -1.71
HERPUD1-206ENST00000563343 FAM229BQ4G0N7 80 aa4.35□□□□□ -1.71
HERPUD1-206ENST00000563343 KRTAP13-1Q8IUC0 172 aa4.35□□□□□ -1.71
HERPUD1-206ENST00000563343 SVBPQ8N300 66 aa4.35□□□□□ -1.71
HERPUD1-206ENST00000563343 ORAOV1Q8WV07 137 aa4.35□□□□□ -1.71
HERPUD1-206ENST00000563343 CSDC2Q9Y534 153 aaKnown RBP4.35□□□□□ -1.71
HERPUD1-206ENST00000563343 TRAV13-1A0A0B4J241 112 aa4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 IGHV3OR16-9A0A0B4J2B5 98 aa4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 RPL35P42766 123 aaKnown RBP4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 RPL28P46779 137 aaKnown RBP4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 POLR2KP53803 58 aaKnown RBP4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 KIAA0087Q14695 138 aa4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 AKR1C8PQ5T2L2 129 aa4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 FP248Q71RG6 208 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 FAM104AQ969W3 186 aa4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 UBE2D4Q9Y2X8 147 aa4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 C22orf24Q9Y442 160 aa4.34□□□□□ -1.71
HERPUD1-206ENST00000563343 C7orf77A4D0Y5 90 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 BCE1O60756 84 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 SNAPINO95295 136 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 IFNA1P01562 189 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 S100A12P80511 92 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 TWIST1Q15672 202 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 CENPWQ5EE01 88 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 Q6ZUT4 128 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 LINC00337Q8N6G1 96 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 C11orf52Q96A22 123 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 CYTL1Q9NRR1 136 aa4.33□□□□□ -1.72
HERPUD1-206ENST00000563343 TRBV27A0A0K0K1C4 114 aa4.32□□□□□ -1.72
HERPUD1-206ENST00000563343 NDUFC2-KCTD14E9PQ53 114 aa4.32□□□□□ -1.72
HERPUD1-206ENST00000563343 PET117Q6UWS5 81 aa4.32□□□□□ -1.72
HERPUD1-206ENST00000563343 ALKAL2Q6UX46 152 aa4.32□□□□□ -1.72
HERPUD1-206ENST00000563343 SEC11CQ9BY50 192 aa4.32□□□□□ -1.72
HERPUD1-206ENST00000563343 TRBV20OR9-2A0A075B6H5 130 aa4.31□□□□□ -1.72
HERPUD1-206ENST00000563343 BORCS7-ASMTA0A0B4J1R7 106 aa4.31□□□□□ -1.72
HERPUD1-206ENST00000563343 TRBV30A0A0K0K1B3 111 aa4.31□□□□□ -1.72
HERPUD1-206ENST00000563343 XKRY2A2RUG3 117 aa4.31□□□□□ -1.72
HERPUD1-206ENST00000563343 BLOC1S1P78537 153 aa4.31□□□□□ -1.72
HERPUD1-206ENST00000563343 MBD3L1Q8WWY6 194 aa4.31□□□□□ -1.72
HERPUD1-206ENST00000563343 TMEM218A2RU14 115 aa4.3□□□□□ -1.72
HERPUD1-206ENST00000563343 C10orf91Q5T1B1 145 aa4.3□□□□□ -1.72
HERPUD1-206ENST00000563343 C2orf82Q6UX34 121 aa4.3□□□□□ -1.72
HERPUD1-206ENST00000563343 C3orf22Q8N5N4 141 aa4.3□□□□□ -1.72
HERPUD1-206ENST00000563343 SMIM12Q96EX1 92 aa4.3□□□□□ -1.72
HERPUD1-206ENST00000563343 ST20Q9HBF5 79 aa4.3□□□□□ -1.72
HERPUD1-206ENST00000563343 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
HERPUD1-206ENST00000563343 FLGP20930 4061 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 IGKV2D-26A0A0A0MRZ7 120 aa4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 APOC3P02656 99 aa4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 S100A8P05109 93 aa4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 SUMO2P61956 95 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 CCL20P78556 96 aa4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 LBHQ53QV2 105 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 MRPL55Q7Z7F7 128 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-206ENST00000563343 PACRGQ96M98 296 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms