RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 IGLV5-39A0A0G2JS06 123 aa13.32□□□□□ -0.28
SMPD3-203ENST00000563226 TMEM238C9JI98 176 aa13.32□□□□□ -0.28
SMPD3-203ENST00000563226 IGKV3OR2-268A0A0C4DH90 116 aa13.31□□□□□ -0.28
SMPD3-203ENST00000563226 F5H768 121 aa13.31□□□□□ -0.28
SMPD3-203ENST00000563226 CFC1BP0CG36 223 aa13.31□□□□□ -0.28
SMPD3-203ENST00000563226 CFC1P0CG37 223 aa13.31□□□□□ -0.28
SMPD3-203ENST00000563226 ADAMTSL4-AS1Q5T5F5 129 aa13.31□□□□□ -0.28
SMPD3-203ENST00000563226 MUSTN1Q8IVN3 82 aa13.31□□□□□ -0.28
SMPD3-203ENST00000563226 PGPEP1Q9NXJ5 209 aa13.31□□□□□ -0.28
SMPD3-203ENST00000563226 EIF4EBP3O60516 100 aaPredicted RBP13.3□□□□□ -0.28
SMPD3-203ENST00000563226 DNAH3Q8TD57 4116 aa13.29□□□□□ -0.28
SMPD3-203ENST00000563226 A4D1N5 150 aa13.29□□□□□ -0.28
SMPD3-203ENST00000563226 NDUFA1O15239 70 aa13.28□□□□□ -0.28
SMPD3-203ENST00000563226 TSPAN13O95857 204 aa13.28□□□□□ -0.28
SMPD3-203ENST00000563226 SHISA2Q6UWI4 295 aa13.27□□□□□ -0.28
SMPD3-203ENST00000563226 RETNQ9HD89 108 aa13.27□□□□□ -0.28
SMPD3-203ENST00000563226 ATP5G1P05496 136 aa13.27□□□□□ -0.29
SMPD3-203ENST00000563226 MAST4O15021 2626 aa13.26□□□□□ -0.29
SMPD3-203ENST00000563226 TRAV26-1A0A087WT03 109 aa13.26□□□□□ -0.29
SMPD3-203ENST00000563226 SPART-AS1P0CW21 52 aa13.26□□□□□ -0.29
SMPD3-203ENST00000563226 EGFEM1PQ0D2K5 195 aa13.26□□□□□ -0.29
SMPD3-203ENST00000563226 Q9H8V8 135 aa13.26□□□□□ -0.29
SMPD3-203ENST00000563226 HTN3P15516 51 aa13.25□□□□□ -0.29
SMPD3-203ENST00000563226 SFTA2Q6UW10 78 aa13.25□□□□□ -0.29
SMPD3-203ENST00000563226 SPANXDQ9BXN6 97 aa13.25□□□□□ -0.29
SMPD3-203ENST00000563226 SPANXCQ9NY87 97 aa13.25□□□□□ -0.29
SMPD3-203ENST00000563226 TMEM262E9PQX1 116 aa13.24□□□□□ -0.29
SMPD3-203ENST00000563226 NPC2P61916 151 aa13.24□□□□□ -0.29
SMPD3-203ENST00000563226 RPL24P83731 157 aaKnown RBP13.24□□□□□ -0.29
SMPD3-203ENST00000563226 PRSS2P07478 247 aa13.24□□□□□ -0.29
SMPD3-203ENST00000563226 RBX1P62877 108 aa13.24□□□□□ -0.29
SMPD3-203ENST00000563226 MIAQ16674 131 aa13.24□□□□□ -0.29
SMPD3-203ENST00000563226 DAND5Q8N907 189 aa13.24□□□□□ -0.29
SMPD3-203ENST00000563226 ZNF625Q96I27 306 aaPredicted RBP13.24□□□□□ -0.29
SMPD3-203ENST00000563226 PRO1854Q9UHT4 67 aa13.22□□□□□ -0.29
SMPD3-203ENST00000563226 G3V4G9 280 aa13.21□□□□□ -0.29
SMPD3-203ENST00000563226 IGHV3OR16-9A0A0B4J2B5 98 aa13.2□□□□□ -0.3
SMPD3-203ENST00000563226 LINC00959A0A1B0GUT2 108 aa13.2□□□□□ -0.3
SMPD3-203ENST00000563226 TIMM17BO60830 172 aa13.2□□□□□ -0.3
SMPD3-203ENST00000563226 CLPSL2Q6UWE3 100 aa13.2□□□□□ -0.3
SMPD3-203ENST00000563226 Q8N3U1 123 aa13.2□□□□□ -0.3
SMPD3-203ENST00000563226 A0A1B0GUV1 79 aa13.2□□□□□ -0.3
SMPD3-203ENST00000563226 H3BMG7 143 aa13.2□□□□□ -0.3
SMPD3-203ENST00000563226 A0A0B4J2C4 111 aa13.19□□□□□ -0.3
SMPD3-203ENST00000563226 LOC107984156A0A0G2JMH3 177 aa13.19□□□□□ -0.3
SMPD3-203ENST00000563226 A0A0U1RRA0 63 aa13.19□□□□□ -0.3
SMPD3-203ENST00000563226 ARL17AQ8IVW1 177 aa13.19□□□□□ -0.3
SMPD3-203ENST00000563226 IGHV3-33P01772 117 aa13.18□□□□□ -0.3
SMPD3-203ENST00000563226 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
SMPD3-203ENST00000563226 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.17□□□□□ -0.3
SMPD3-203ENST00000563226 MTURNQ8N3F0 131 aa13.16□□□□□ -0.3
SMPD3-203ENST00000563226 COX7B2Q8TF08 81 aa13.16□□□□□ -0.3
SMPD3-203ENST00000563226 COL6A5A8TX70 2615 aa13.16□□□□□ -0.3
SMPD3-203ENST00000563226 H7C2G1 150 aa13.16□□□□□ -0.3
SMPD3-203ENST00000563226 TOMM7Q9P0U1 55 aa13.16□□□□□ -0.3
SMPD3-203ENST00000563226 A0A087WZ39 114 aa13.15□□□□□ -0.3
SMPD3-203ENST00000563226 XCL1P47992 114 aa13.15□□□□□ -0.3
SMPD3-203ENST00000563226 MRPL23Q16540 153 aaKnown RBP13.15□□□□□ -0.3
SMPD3-203ENST00000563226 CIRBPQ14011 172 aaKnown RBP13.14□□□□□ -0.31
SMPD3-203ENST00000563226 TENM3Q9P273 2699 aa13.14□□□□□ -0.31
SMPD3-203ENST00000563226 OCIAD2Q56VL3 154 aa13.14□□□□□ -0.31
SMPD3-203ENST00000563226 MEIG1Q5JSS6 88 aa13.14□□□□□ -0.31
SMPD3-203ENST00000563226 ICOSQ9Y6W8 199 aa13.14□□□□□ -0.31
SMPD3-203ENST00000563226 LINC00269Q8N2A0 174 aa13.13□□□□□ -0.31
SMPD3-203ENST00000563226 LINC00308Q8TCZ7 52 aa13.13□□□□□ -0.31
SMPD3-203ENST00000563226 ERG28Q9UKR5 140 aa13.13□□□□□ -0.31
SMPD3-203ENST00000563226 IFITM1P13164 125 aa13.12□□□□□ -0.31
SMPD3-203ENST00000563226 PSMB2P49721 201 aa13.12□□□□□ -0.31
SMPD3-203ENST00000563226 SOSTDC1Q6X4U4 206 aa13.12□□□□□ -0.31
SMPD3-203ENST00000563226 HERV-K104P63124 156 aa13.12□□□□□ -0.31
SMPD3-203ENST00000563226 SS18Q15532 418 aa13.12□□□□□ -0.31
SMPD3-203ENST00000563226 TEX48A0A1B0GUV7 120 aa13.11□□□□□ -0.31
SMPD3-203ENST00000563226 WFDC2Q14508 124 aa13.11□□□□□ -0.31
SMPD3-203ENST00000563226 PRO0461Q9UI25 63 aa13.11□□□□□ -0.31
SMPD3-203ENST00000563226 TCL1BO95988 128 aa13.11□□□□□ -0.31
SMPD3-203ENST00000563226 ANGP03950 147 aaKnown RBP13.1□□□□□ -0.31
SMPD3-203ENST00000563226 NOTCH1P46531 2555 aa13.09□□□□□ -0.31
SMPD3-203ENST00000563226 Q1RN00 199 aa13.09□□□□□ -0.31
SMPD3-203ENST00000563226 LELP1Q5T871 98 aa13.09□□□□□ -0.31
SMPD3-203ENST00000563226 Q6ZTC4 211 aa13.09□□□□□ -0.31
SMPD3-203ENST00000563226 PRB2P02812 416 aaPredicted RBP13.09□□□□□ -0.31
SMPD3-203ENST00000563226 F8W1H4 67 aa13.08□□□□□ -0.32
SMPD3-203ENST00000563226 IGLV10-54A0A075B6I4 117 aa13.08□□□□□ -0.32
SMPD3-203ENST00000563226 SCGB1C2P0DMR2 95 aa13.08□□□□□ -0.32
SMPD3-203ENST00000563226 REG3AQ06141 175 aa13.08□□□□□ -0.32
SMPD3-203ENST00000563226 A0A0J9YWU9 116 aa13.07□□□□□ -0.32
SMPD3-203ENST00000563226 LYRM7Q5U5X0 104 aa13.07□□□□□ -0.32
SMPD3-203ENST00000563226 C11orf68Q9H3H3 251 aaKnown RBP13.07□□□□□ -0.32
SMPD3-203ENST00000563226 SH2D6Q7Z4S9 175 aa13.06□□□□□ -0.32
SMPD3-203ENST00000563226 LYPD5Q6UWN5 251 aa13.06□□□□□ -0.32
SMPD3-203ENST00000563226 CHCHD10Q8WYQ3 142 aaPredicted RBP13.06□□□□□ -0.32
SMPD3-203ENST00000563226 TRIAP1O43715 76 aa13.05□□□□□ -0.32
SMPD3-203ENST00000563226 SMCPP49901 116 aaPredicted RBP13.04□□□□□ -0.32
SMPD3-203ENST00000563226 KPRPQ5T749 579 aaPredicted RBP13.04□□□□□ -0.32
SMPD3-203ENST00000563226 RPL13AP40429 203 aaKnown RBP13.04□□□□□ -0.32
SMPD3-203ENST00000563226 TRBV20-1A0A075B6N2 111 aa13.03□□□□□ -0.32
SMPD3-203ENST00000563226 RNF151Q2KHN1 245 aa13.03□□□□□ -0.32
SMPD3-203ENST00000563226 CD164L2Q6UWJ8 174 aa13.03□□□□□ -0.32
SMPD3-203ENST00000563226 MIR7-3HGQ8N6C7 128 aa13.03□□□□□ -0.32
SMPD3-203ENST00000563226 NANOS2P60321 138 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms