RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 MT-ND6P03923 174 aa4.05□□□□□ -1.76
CNOT1-204ENST00000563130 ZNF664Q8N3J9 261 aa4.05□□□□□ -1.76
CNOT1-204ENST00000563130 TMEM101Q96IK0 257 aa4.05□□□□□ -1.76
CNOT1-204ENST00000563130 YPEL4Q96NS1 127 aa4.05□□□□□ -1.76
CNOT1-204ENST00000563130 MAP1LC3AQ9H492 121 aa4.05□□□□□ -1.76
CNOT1-204ENST00000563130 K7EMI3 77 aa4.05□□□□□ -1.76
CNOT1-204ENST00000563130 RPL39P62891 51 aaKnown RBP4.05□□□□□ -1.76
CNOT1-204ENST00000563130 KIAA1644Q3SXP7 199 aa4.05□□□□□ -1.76
CNOT1-204ENST00000563130 Q8N8P6 123 aa4.05□□□□□ -1.76
CNOT1-204ENST00000563130 TMEM18Q96B42 140 aa4.05□□□□□ -1.76
CNOT1-204ENST00000563130 HSPG2P98160 4391 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 IGLV5-52A0A0A0MRZ9 124 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 TGIF2-C20orf24A0A0A6YYL0 155 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 LOC389332A0A1B0GUA5 103 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 LINC00959A0A1B0GUT2 108 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 CDK2AP2O75956 126 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 RAB5AP20339 215 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 SEC61GP60059 68 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 KRTAP10-1P60331 282 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 SMAGPQ0VAQ4 97 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 CHCHD10Q8WYQ3 142 aaPredicted RBP4.04□□□□□ -1.76
CNOT1-204ENST00000563130 SPANXA1Q9NS26 97 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 IGKV3OR2-268A0A0C4DH90 116 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 SNRPEP62304 92 aaKnown RBP4.04□□□□□ -1.76
CNOT1-204ENST00000563130 C14orf177Q52M58 125 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 NXT2Q9NPJ8 142 aaKnown RBP4.04□□□□□ -1.76
CNOT1-204ENST00000563130 PYGO1Q9Y3Y4 419 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 DNAH8Q96JB1 4490 aa4.04□□□□□ -1.76
CNOT1-204ENST00000563130 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.03□□□□□ -1.76
CNOT1-204ENST00000563130 GAGE12HA6NDE8 117 aa4.03□□□□□ -1.76
CNOT1-204ENST00000563130 LINC01546A6NGU7 62 aa4.03□□□□□ -1.76
CNOT1-204ENST00000563130 PCP4L1A6NKN8 68 aa4.03□□□□□ -1.76
CNOT1-204ENST00000563130 PRSS1P07477 247 aa4.03□□□□□ -1.76
CNOT1-204ENST00000563130 IFI27P40305 119 aaPredicted RBP4.03□□□□□ -1.76
CNOT1-204ENST00000563130 MRPS36P82909 103 aaKnown RBP4.03□□□□□ -1.76
CNOT1-204ENST00000563130 FOXI1Q12951 378 aa4.03□□□□□ -1.76
CNOT1-204ENST00000563130 Q6ZUT4 128 aa4.03□□□□□ -1.76
CNOT1-204ENST00000563130 CCL25O15444 150 aa4.02□□□□□ -1.77
CNOT1-204ENST00000563130 FABP9Q0Z7S8 132 aa4.02□□□□□ -1.77
CNOT1-204ENST00000563130 UBE2V1Q13404 147 aa4.02□□□□□ -1.77
CNOT1-204ENST00000563130 ORMDL2Q53FV1 153 aa4.02□□□□□ -1.77
CNOT1-204ENST00000563130 C1orf196B1AJZ1 125 aa4.02□□□□□ -1.77
CNOT1-204ENST00000563130 XGP55808 180 aa4.02□□□□□ -1.77
CNOT1-204ENST00000563130 RNASE13Q5GAN3 156 aaKnown RBP4.02□□□□□ -1.77
CNOT1-204ENST00000563130 CD164L2Q6UWJ8 174 aa4.02□□□□□ -1.77
CNOT1-204ENST00000563130 C2orf66Q6UXQ4 117 aa4.02□□□□□ -1.77
CNOT1-204ENST00000563130 C15orf56Q8N910 161 aa4.02□□□□□ -1.77
CNOT1-204ENST00000563130 OPRPNQ99935 248 aaPredicted RBP4.02□□□□□ -1.77
CNOT1-204ENST00000563130 IGIPA6NJ69 53 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 NPSP0C0P6 89 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 XCL1P47992 114 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 CNBPP62633 177 aaKnown RBP4.01□□□□□ -1.77
CNOT1-204ENST00000563130 SS18Q15532 418 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 Q6ZSA8 131 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 CBLN2Q8IUK8 224 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 KRTAP17-1Q9BYP8 105 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 CYSLTR1Q9Y271 337 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 TRAPPC1Q9Y5R8 145 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 IGLV4-3A0A075B6K6 122 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 SLPIP03973 132 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 PRSS3P2Q8NHM4 247 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 SMCO4Q9NRQ5 59 aa4.01□□□□□ -1.77
CNOT1-204ENST00000563130 GVQW2A0A096LPI5 108 aaPredicted RBP4□□□□□ -1.77
CNOT1-204ENST00000563130 TRAV13-1A0A0B4J241 112 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 G0S2P27469 103 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 HERV-K104P63124 156 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 LINC01620Q4KN68 170 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 C9orf163Q8N9P6 203 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 C18orf32Q8TCD1 76 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 TOMM6Q96B49 74 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 URB1-AS1Q96HZ7 61 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 AMELXQ99217 191 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 IGHV3OR16-9A0A0B4J2B5 98 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 hDV102S1A0JD36 115 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 LINC00173Q6ZV60 143 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 TMEM141Q96I45 108 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 TIMM17AQ99595 171 aa4□□□□□ -1.77
CNOT1-204ENST00000563130 LINC01549A6NIU2 74 aa3.99□□□□□ -1.77
CNOT1-204ENST00000563130 FAT1Q14517 4588 aa3.99□□□□□ -1.77
CNOT1-204ENST00000563130 A0A096LNJ9 63 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 IGHV1-58A0A0C4DH39 117 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 IFITM10A6NMD0 228 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 LINC00242Q5T6M2 205 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 TEX43Q6ZNM6 134 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 SDIM1Q6ZPB5 146 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 FAM19A3Q7Z5A8 133 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 Q8N1X5 172 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 COLCA2A8K830 154 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 COX7A2LO14548 114 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 LINC00614P0C842 121 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 UBE2D1P51668 147 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 HIGD2BQ4VC39 106 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 FA2HQ7L5A8 372 aa3.98□□□□□ -1.77
CNOT1-204ENST00000563130 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-204ENST00000563130 PAPPA-AS1Q5QFB9 102 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 ZC2HC1BQ5TFG8 222 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 Q6ZN92 141 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 C5orf38Q86SI9 138 aa3.97□□□□□ -1.77
CNOT1-204ENST00000563130 PCLOQ9Y6V0 5065 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms