RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 LINC00242Q5T6M2 205 aa11.32□□□□□ -0.6
CCNDBP1-204ENST00000563065 Q6ZN92 141 aa11.32□□□□□ -0.6
CCNDBP1-204ENST00000563065 UBE2D1P51668 147 aa11.31□□□□□ -0.6
CCNDBP1-204ENST00000563065 HAMPP81172 84 aa11.31□□□□□ -0.6
CCNDBP1-204ENST00000563065 IGHV3OR16-9A0A0B4J2B5 98 aa11.3□□□□□ -0.6
CCNDBP1-204ENST00000563065 IGHV1-58A0A0C4DH39 117 aa11.3□□□□□ -0.6
CCNDBP1-204ENST00000563065 NPSP0C0P6 89 aa11.3□□□□□ -0.6
CCNDBP1-204ENST00000563065 MALP21145 153 aa11.3□□□□□ -0.6
CCNDBP1-204ENST00000563065 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
CCNDBP1-204ENST00000563065 GVQW2A0A096LPI5 108 aaPredicted RBP11.29□□□□□ -0.6
CCNDBP1-204ENST00000563065 XGP55808 180 aa11.29□□□□□ -0.6
CCNDBP1-204ENST00000563065 RAB5BP61020 215 aa11.29□□□□□ -0.6
CCNDBP1-204ENST00000563065 KRTAP17-1Q9BYP8 105 aa11.29□□□□□ -0.6
CCNDBP1-204ENST00000563065 CDK2AP2O75956 126 aa11.28□□□□□ -0.6
CCNDBP1-204ENST00000563065 CNBPP62633 177 aaKnown RBP11.28□□□□□ -0.6
CCNDBP1-204ENST00000563065 HBDP02042 147 aa11.27□□□□□ -0.6
CCNDBP1-204ENST00000563065 S100A1P23297 94 aa11.27□□□□□ -0.6
CCNDBP1-204ENST00000563065 C9orf163Q8N9P6 203 aa11.27□□□□□ -0.6
CCNDBP1-204ENST00000563065 PAPPA-AS1Q5QFB9 102 aa11.26□□□□□ -0.61
CCNDBP1-204ENST00000563065 BAGE3Q86Y29 109 aa11.26□□□□□ -0.61
CCNDBP1-204ENST00000563065 A0A0J9YXV3 536 aa11.25□□□□□ -0.61
CCNDBP1-204ENST00000563065 PDZD11Q5EBL8 140 aa11.25□□□□□ -0.61
CCNDBP1-204ENST00000563065 CHCHD1Q96BP2 118 aaKnown RBP11.25□□□□□ -0.61
CCNDBP1-204ENST00000563065 CST9LQ9H4G1 147 aa11.25□□□□□ -0.61
CCNDBP1-204ENST00000563065 IGLV4-69A0A075B6H9 119 aa11.25□□□□□ -0.61
CCNDBP1-204ENST00000563065 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
CCNDBP1-204ENST00000563065 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.25□□□□□ -0.61
CCNDBP1-204ENST00000563065 LINC00310P59036 64 aa11.25□□□□□ -0.61
CCNDBP1-204ENST00000563065 ZNF561-AS1K7EIQ3 104 aa11.24□□□□□ -0.61
CCNDBP1-204ENST00000563065 SDIM1Q6ZPB5 146 aa11.24□□□□□ -0.61
CCNDBP1-204ENST00000563065 FAM19A2Q8N3H0 131 aa11.24□□□□□ -0.61
CCNDBP1-204ENST00000563065 A0A087WZ39 114 aa11.23□□□□□ -0.61
CCNDBP1-204ENST00000563065 NUPR1O60356 82 aa11.23□□□□□ -0.61
CCNDBP1-204ENST00000563065 Q6ZSA8 131 aa11.23□□□□□ -0.61
CCNDBP1-204ENST00000563065 FAM19A3Q7Z5A8 133 aa11.23□□□□□ -0.61
CCNDBP1-204ENST00000563065 IGHV3-64A0A075B6Q5 118 aa11.22□□□□□ -0.61
CCNDBP1-204ENST00000563065 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.22□□□□□ -0.61
CCNDBP1-204ENST00000563065 SERF1AO75920 110 aa11.22□□□□□ -0.61
CCNDBP1-204ENST00000563065 APOMO95445 188 aa11.22□□□□□ -0.61
CCNDBP1-204ENST00000563065 NDUFA6P56556 154 aa11.22□□□□□ -0.61
CCNDBP1-204ENST00000563065 PMVKQ15126 192 aa11.22□□□□□ -0.61
CCNDBP1-204ENST00000563065 ORAOV1Q8WV07 137 aa11.22□□□□□ -0.61
CCNDBP1-204ENST00000563065 FAT1Q14517 4588 aa11.21□□□□□ -0.61
CCNDBP1-204ENST00000563065 SPAG11BQ08648 103 aa11.21□□□□□ -0.61
CCNDBP1-204ENST00000563065 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.61
CCNDBP1-204ENST00000563065 PANO1I0J062 215 aa11.2□□□□□ -0.62
CCNDBP1-204ENST00000563065 HSBP1O75506 76 aa11.2□□□□□ -0.62
CCNDBP1-204ENST00000563065 SYCNQ0VAF6 134 aa11.19□□□□□ -0.62
CCNDBP1-204ENST00000563065 Q6ZRU5 148 aa11.19□□□□□ -0.62
CCNDBP1-204ENST00000563065 GEMIN7Q9H840 131 aaKnown RBP11.19□□□□□ -0.62
CCNDBP1-204ENST00000563065 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.19□□□□□ -0.62
CCNDBP1-204ENST00000563065 SMR3BP02814 79 aaPredicted RBP11.19□□□□□ -0.62
CCNDBP1-204ENST00000563065 HERVK_113P63121 156 aa11.19□□□□□ -0.62
CCNDBP1-204ENST00000563065 OR10D4PQ8NGN7 298 aa11.19□□□□□ -0.62
CCNDBP1-204ENST00000563065 CARD19Q96LW7 228 aa11.19□□□□□ -0.62
CCNDBP1-204ENST00000563065 CAMK2N2Q96S95 79 aa11.19□□□□□ -0.62
CCNDBP1-204ENST00000563065 TINCRA0A1B0GVN0 87 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST1H2BKO60814 126 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 ATP5LO75964 103 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST1H2BJP06899 126 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 CHTF8P0CG12 524 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST1H2BOP23527 126 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST1H2BBP33778 126 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST1H2BDP58876 126 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST1H2BCP62807 126 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 SEC11AP67812 179 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 KIAA0087Q14695 138 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST2H2BEQ16778 126 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST1H2BHQ93079 126 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST1H2BNQ99877 126 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 HIST1H2BMQ99879 126 aa11.18□□□□□ -0.62
CCNDBP1-204ENST00000563065 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
CCNDBP1-204ENST00000563065 LINC00469Q8N7U9 141 aa11.17□□□□□ -0.62
CCNDBP1-204ENST00000563065 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
CCNDBP1-204ENST00000563065 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
CCNDBP1-204ENST00000563065 IFI27L1Q96BM0 104 aa11.16□□□□□ -0.62
CCNDBP1-204ENST00000563065 CHAC1Q9BUX1 264 aa11.16□□□□□ -0.62
CCNDBP1-204ENST00000563065 KRTAP4-5Q9BYR2 181 aa11.16□□□□□ -0.62
CCNDBP1-204ENST00000563065 UNQ6190/PRO20217Q6UXQ8 127 aa11.15□□□□□ -0.62
CCNDBP1-204ENST00000563065 LINC01561Q8N1V8 128 aa11.15□□□□□ -0.62
CCNDBP1-204ENST00000563065 CIRBP-AS1Q8TBR5 109 aa11.15□□□□□ -0.62
CCNDBP1-204ENST00000563065 C2orf82Q6UX34 121 aa11.14□□□□□ -0.63
CCNDBP1-204ENST00000563065 TOMM7Q9P0U1 55 aa11.14□□□□□ -0.63
CCNDBP1-204ENST00000563065 IGLV5-45A0A087WSX0 123 aa11.13□□□□□ -0.63
CCNDBP1-204ENST00000563065 IGLC3P0DOY3 106 aa11.13□□□□□ -0.63
CCNDBP1-204ENST00000563065 IGKV2-24A0A0C4DH68 120 aa11.12□□□□□ -0.63
CCNDBP1-204ENST00000563065 SPINK8P0C7L1 97 aa11.12□□□□□ -0.63
CCNDBP1-204ENST00000563065 FABP4P15090 132 aa11.12□□□□□ -0.63
CCNDBP1-204ENST00000563065 Q8N1X5 172 aa11.12□□□□□ -0.63
CCNDBP1-204ENST00000563065 PACRGQ96M98 296 aaPredicted RBP11.12□□□□□ -0.63
CCNDBP1-204ENST00000563065 A0A096LNI7 61 aa11.12□□□□□ -0.63
CCNDBP1-204ENST00000563065 SMIM1B2RUZ4 78 aa11.12□□□□□ -0.63
CCNDBP1-204ENST00000563065 DPH3Q96FX2 82 aa11.12□□□□□ -0.63
CCNDBP1-204ENST00000563065 C11orf86A6NJI1 115 aa11.11□□□□□ -0.63
CCNDBP1-204ENST00000563065 NDUFA1O15239 70 aa11.11□□□□□ -0.63
CCNDBP1-204ENST00000563065 LEPROTL1O95214 131 aa11.11□□□□□ -0.63
CCNDBP1-204ENST00000563065 ZNF22P17026 224 aaPredicted RBP11.11□□□□□ -0.63
CCNDBP1-204ENST00000563065 CIRBPQ14011 172 aaKnown RBP11.11□□□□□ -0.63
CCNDBP1-204ENST00000563065 C6orf48Q9UBA6 75 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms