RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 C9JQL5 133 aa9.51□□□□□ -0.89
HERPUD1-205ENST00000562914 NDUFA1O15239 70 aa9.51□□□□□ -0.89
HERPUD1-205ENST00000562914 AMN1Q8IY45 258 aa9.51□□□□□ -0.89
HERPUD1-205ENST00000562914 UBE2D1P51668 147 aa9.5□□□□□ -0.89
HERPUD1-205ENST00000562914 RPL23P62829 140 aaKnown RBP9.5□□□□□ -0.89
HERPUD1-205ENST00000562914 ADIRFQ15847 76 aa9.5□□□□□ -0.89
HERPUD1-205ENST00000562914 RNASE13Q5GAN3 156 aaKnown RBP9.5□□□□□ -0.89
HERPUD1-205ENST00000562914 ORAOV1Q8WV07 137 aa9.5□□□□□ -0.89
HERPUD1-205ENST00000562914 RIGQ13278 110 aa9.49□□□□□ -0.89
HERPUD1-205ENST00000562914 Q6ZUT4 128 aa9.49□□□□□ -0.89
HERPUD1-205ENST00000562914 IGHV3OR16-9A0A0B4J2B5 98 aa9.48□□□□□ -0.89
HERPUD1-205ENST00000562914 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
HERPUD1-205ENST00000562914 PRR4Q16378 134 aa9.48□□□□□ -0.89
HERPUD1-205ENST00000562914 NRACQ8N912 160 aa9.48□□□□□ -0.89
HERPUD1-205ENST00000562914 CARHSP1Q9Y2V2 147 aaKnown RBP9.48□□□□□ -0.89
HERPUD1-205ENST00000562914 LINC00862A6NCI5 91 aa9.47□□□□□ -0.89
HERPUD1-205ENST00000562914 RPL32P62910 135 aaKnown RBP9.47□□□□□ -0.89
HERPUD1-205ENST00000562914 IFITM2Q01629 132 aa9.47□□□□□ -0.89
HERPUD1-205ENST00000562914 C20orf78Q9BR46 151 aa9.47□□□□□ -0.89
HERPUD1-205ENST00000562914 SMKR1H3BMG3 65 aa9.46□□□□□ -0.9
HERPUD1-205ENST00000562914 FAM19A5Q7Z5A7 132 aaPredicted RBP9.46□□□□□ -0.9
HERPUD1-205ENST00000562914 SPANXA1Q9NS26 97 aa9.46□□□□□ -0.9
HERPUD1-205ENST00000562914 V9GYV3 84 aa9.46□□□□□ -0.9
HERPUD1-205ENST00000562914 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
HERPUD1-205ENST00000562914 UBE2BP63146 152 aa9.45□□□□□ -0.9
HERPUD1-205ENST00000562914 MRPS36P82909 103 aaKnown RBP9.45□□□□□ -0.9
HERPUD1-205ENST00000562914 MUC2Q02817 5179 aa9.45□□□□□ -0.9
HERPUD1-205ENST00000562914 TRBV24-1A0A075B6N3 115 aa9.44□□□□□ -0.9
HERPUD1-205ENST00000562914 M0QXV9 152 aa9.44□□□□□ -0.9
HERPUD1-205ENST00000562914 PNRC1Q12796 327 aaPredicted RBP9.44□□□□□ -0.9
HERPUD1-205ENST00000562914 UQCC3Q6UW78 93 aa9.44□□□□□ -0.9
HERPUD1-205ENST00000562914 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
HERPUD1-205ENST00000562914 C6orf48Q9UBA6 75 aa9.44□□□□□ -0.9
HERPUD1-205ENST00000562914 NAT8BQ9UHF3 227 aa9.44□□□□□ -0.9
HERPUD1-205ENST00000562914 TGIF2-C20orf24A0A0A6YYL0 155 aa9.43□□□□□ -0.9
HERPUD1-205ENST00000562914 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
HERPUD1-205ENST00000562914 HBBP68871 147 aa9.43□□□□□ -0.9
HERPUD1-205ENST00000562914 GAGE2EQ4V326 116 aa9.43□□□□□ -0.9
HERPUD1-205ENST00000562914 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
HERPUD1-205ENST00000562914 FAM104BQ5XKR9 115 aa9.43□□□□□ -0.9
HERPUD1-205ENST00000562914 UNQ6190/PRO20217Q6UXQ8 127 aa9.43□□□□□ -0.9
HERPUD1-205ENST00000562914 GAGE2DQ9UEU5 116 aa9.43□□□□□ -0.9
HERPUD1-205ENST00000562914 A0A1B0GW15 77 aa9.41□□□□□ -0.9
HERPUD1-205ENST00000562914 IFITM10A6NMD0 228 aa9.41□□□□□ -0.9
HERPUD1-205ENST00000562914 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
HERPUD1-205ENST00000562914 RPL39P62891 51 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-205ENST00000562914 MRPL51Q4U2R6 128 aaKnown RBP9.41□□□□□ -0.9
HERPUD1-205ENST00000562914 KRTAP9-2Q9BYQ4 174 aa9.41□□□□□ -0.9
HERPUD1-205ENST00000562914 SMIM27A0A1W2PRY6 76 aa9.4□□□□□ -0.9
HERPUD1-205ENST00000562914 CKS2P33552 79 aa9.4□□□□□ -0.9
HERPUD1-205ENST00000562914 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
HERPUD1-205ENST00000562914 FAM104AQ969W3 186 aa9.4□□□□□ -0.9
HERPUD1-205ENST00000562914 NUPR1O60356 82 aa9.39□□□□□ -0.91
HERPUD1-205ENST00000562914 ZNF861PO60384 105 aa9.39□□□□□ -0.91
HERPUD1-205ENST00000562914 MT-ND4LP03901 98 aa9.39□□□□□ -0.91
HERPUD1-205ENST00000562914 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
HERPUD1-205ENST00000562914 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
HERPUD1-205ENST00000562914 PACRGQ96M98 296 aaPredicted RBP9.39□□□□□ -0.91
HERPUD1-205ENST00000562914 SMIM2Q9BVW6 85 aa9.39□□□□□ -0.91
HERPUD1-205ENST00000562914 TNFRSF6BO95407 300 aa9.38□□□□□ -0.91
HERPUD1-205ENST00000562914 S100A8P05109 93 aa9.38□□□□□ -0.91
HERPUD1-205ENST00000562914 TMEM218A2RU14 115 aa9.37□□□□□ -0.91
HERPUD1-205ENST00000562914 F8W036 122 aa9.37□□□□□ -0.91
HERPUD1-205ENST00000562914 IFI27P40305 119 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-205ENST00000562914 COMMD7Q86VX2 200 aa9.37□□□□□ -0.91
HERPUD1-205ENST00000562914 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
HERPUD1-205ENST00000562914 PYGO1Q9Y3Y4 419 aa9.36□□□□□ -0.91
HERPUD1-205ENST00000562914 PPBPP02775 128 aa9.35□□□□□ -0.91
HERPUD1-205ENST00000562914 LBHQ53QV2 105 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-205ENST00000562914 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
HERPUD1-205ENST00000562914 SEC11CQ9BY50 192 aa9.35□□□□□ -0.91
HERPUD1-205ENST00000562914 RAB5AP20339 215 aa9.34□□□□□ -0.91
HERPUD1-205ENST00000562914 LINC00242Q5T6M2 205 aa9.34□□□□□ -0.91
HERPUD1-205ENST00000562914 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.91
HERPUD1-205ENST00000562914 D6R8Y8 96 aa9.33□□□□□ -0.92
HERPUD1-205ENST00000562914 MRPL54Q6P161 138 aaKnown RBP9.33□□□□□ -0.92
HERPUD1-205ENST00000562914 TMEM141Q96I45 108 aa9.33□□□□□ -0.92
HERPUD1-205ENST00000562914 ADCYAP1P18509 176 aa9.32□□□□□ -0.92
HERPUD1-205ENST00000562914 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
HERPUD1-205ENST00000562914 CTDSP1Q9GZU7 261 aa9.32□□□□□ -0.92
HERPUD1-205ENST00000562914 TSPAN13O95857 204 aa9.31□□□□□ -0.92
HERPUD1-205ENST00000562914 PRSS2P07478 247 aa9.31□□□□□ -0.92
HERPUD1-205ENST00000562914 RPL28P46779 137 aaKnown RBP9.31□□□□□ -0.92
HERPUD1-205ENST00000562914 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
HERPUD1-205ENST00000562914 TEX43Q6ZNM6 134 aa9.31□□□□□ -0.92
HERPUD1-205ENST00000562914 C2orf88Q9BSF0 95 aa9.31□□□□□ -0.92
HERPUD1-205ENST00000562914 TP73-AS1Q9UF72 201 aa9.31□□□□□ -0.92
HERPUD1-205ENST00000562914 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
HERPUD1-205ENST00000562914 IGLV4-3A0A075B6K6 122 aa9.3□□□□□ -0.92
HERPUD1-205ENST00000562914 A0A1B0GXF2 115 aa9.3□□□□□ -0.92
HERPUD1-205ENST00000562914 NPYP01303 97 aa9.3□□□□□ -0.92
HERPUD1-205ENST00000562914 CRYGAP11844 174 aa9.3□□□□□ -0.92
HERPUD1-205ENST00000562914 CKS1BP61024 79 aa9.3□□□□□ -0.92
HERPUD1-205ENST00000562914 Q6ZN92 141 aa9.3□□□□□ -0.92
HERPUD1-205ENST00000562914 ORMDL3Q8N138 153 aa9.29□□□□□ -0.92
HERPUD1-205ENST00000562914 TYMSOSQ8TAI1 123 aa9.29□□□□□ -0.92
HERPUD1-205ENST00000562914 NPSP0C0P6 89 aa9.28□□□□□ -0.92
HERPUD1-205ENST00000562914 Q8IZM0 81 aa9.28□□□□□ -0.92
HERPUD1-205ENST00000562914 BCE1O60756 84 aa9.27□□□□□ -0.93
HERPUD1-205ENST00000562914 NDUFA5Q16718 116 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms