RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 TRBV25-1A0A075B6N4 114 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 IGHV1-24A0A0C4DH33 117 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 TRBV10-1A0A0K0K1A3 114 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 M0QY20 66 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 CCL25O15444 150 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 SNAI2O43623 268 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 SEC11BP0C7V7 166 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 RAB5AP20339 215 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 S100A5P33763 92 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 FOXA3P55318 350 aaPredicted RBP3.04□□□□□ -1.92
UBR1-203ENST00000562173 RAB4BP61018 213 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 RPL18AQ02543 176 aaKnown RBP3.04□□□□□ -1.92
UBR1-203ENST00000562173 DNLZQ5SXM8 178 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 C5orf17Q8NAS9 161 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 RPL39LQ96EH5 51 aaKnown RBP3.04□□□□□ -1.92
UBR1-203ENST00000562173 NDFIP1Q9BT67 221 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 RPP21Q9H633 154 aaKnown RBP3.04□□□□□ -1.92
UBR1-203ENST00000562173 HSPB11Q9Y547 144 aa3.04□□□□□ -1.92
UBR1-203ENST00000562173 FABP5P3A8MUU1 101 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 PEX7O00628 323 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 IL7P13232 177 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 RAB4AP20338 218 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 CDC34P49427 236 aaPredicted RBP3.03□□□□□ -1.92
UBR1-203ENST00000562173 H2BFSP57053 126 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 HBG1P69891 147 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 HBG2P69892 147 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 SYCNQ0VAF6 134 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 ZFP82Q8N141 532 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 NKAPP1Q8N9T2 125 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 TMEM243Q9BU79 118 aa3.03□□□□□ -1.92
UBR1-203ENST00000562173 IGLV1-50A0A075B6I6 118 aa3.02□□□□□ -1.93
UBR1-203ENST00000562173 AP3S2P59780 193 aa3.02□□□□□ -1.93
UBR1-203ENST00000562173 TAL2Q16559 108 aa3.02□□□□□ -1.93
UBR1-203ENST00000562173 Q8N9L7 120 aa3.02□□□□□ -1.93
UBR1-203ENST00000562173 FER1L6-AS1Q8NA97 138 aa3.02□□□□□ -1.93
UBR1-203ENST00000562173 NUP35Q8NFH5 326 aa3.02□□□□□ -1.93
UBR1-203ENST00000562173 DIRC1Q969H9 104 aa3.02□□□□□ -1.93
UBR1-203ENST00000562173 TRAV8-4A0A0B4J246 113 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 A0A1B0GV50 99 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 INMT-MINDY4F8WBC2 141 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 P01737 135 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 PVALBP20472 110 aaPredicted RBP3.01□□□□□ -1.93
UBR1-203ENST00000562173 ATP6V0CP27449 155 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 UBE2D1P51668 147 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 Q5BKY6 102 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 TRIQKQ629K1 86 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 C5orf38Q86SI9 138 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 OR5A1Q8NGJ0 315 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 MRPS26Q9BYN8 205 aaKnown RBP3.01□□□□□ -1.93
UBR1-203ENST00000562173 USH2AO75445 5202 aa3.01□□□□□ -1.93
UBR1-203ENST00000562173 LOC107984640A0A0U1RRK4 108 aa3□□□□□ -1.93
UBR1-203ENST00000562173 LINC00959A0A1B0GUT2 108 aa3□□□□□ -1.93
UBR1-203ENST00000562173 C17orf112F2Z3M2 114 aa3□□□□□ -1.93
UBR1-203ENST00000562173 LYRM1O43325 122 aa3□□□□□ -1.93
UBR1-203ENST00000562173 CTRLP40313 264 aa3□□□□□ -1.93
UBR1-203ENST00000562173 TAS2R45P59539 299 aa3□□□□□ -1.93
UBR1-203ENST00000562173 EIF5AP63241 154 aaKnown RBP3□□□□□ -1.93
UBR1-203ENST00000562173 FAM74A1Q5RGS3 127 aa3□□□□□ -1.93
UBR1-203ENST00000562173 FAM162BQ5T6X4 162 aa3□□□□□ -1.93
UBR1-203ENST00000562173 MRPL52Q86TS9 123 aaKnown RBP3□□□□□ -1.93
UBR1-203ENST00000562173 CBLN2Q8IUK8 224 aa3□□□□□ -1.93
UBR1-203ENST00000562173 PPP1R1CQ8WVI7 109 aa3□□□□□ -1.93
UBR1-203ENST00000562173 RNASE7Q9H1E1 156 aaKnown RBP3□□□□□ -1.93
UBR1-203ENST00000562173 NAP1L6A6NFF2 107 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 CCDC160A6NGH7 325 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 KRTAP4-16G5E9R7 235 aaPredicted RBP2.99□□□□□ -1.93
UBR1-203ENST00000562173 SMLR1H3BR10 107 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 MPC2O95563 127 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 FGF6P10767 208 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 SAPCD1Q5SSQ6 148 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 SPANXN1Q5VSR9 72 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 C3orf22Q8N5N4 141 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 GATD1Q8NB37 220 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 SCGB1C1Q8TD33 95 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 C6orf48Q9UBA6 75 aa2.99□□□□□ -1.93
UBR1-203ENST00000562173 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
UBR1-203ENST00000562173 PIGBOS1A0A0B4J2F0 54 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 IGHV1-58A0A0C4DH39 117 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 K7EN84 100 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 M0QXV9 152 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 UBE2L6O14933 153 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 SCO1O75880 301 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 LTAP01374 205 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 PET100P0DJ07 73 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 NTF3P20783 257 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 IFITM3Q01628 133 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 SS18Q15532 418 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 TPRXLQ17RH7 258 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 UNQ6190/PRO20217Q6UXQ8 127 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 BOD1L2Q8IYS8 172 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 FAM104AQ969W3 186 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 CAMK2N2Q96S95 79 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 TMEM242Q9NWH2 141 aa2.98□□□□□ -1.93
UBR1-203ENST00000562173 TRAV1-1A0A0B4J248 108 aa2.97□□□□□ -1.93
UBR1-203ENST00000562173 APOMO95445 188 aa2.97□□□□□ -1.93
UBR1-203ENST00000562173 OR5AL1P0C617 328 aa2.97□□□□□ -1.93
UBR1-203ENST00000562173 IGLC6P0CF74 106 aa2.97□□□□□ -1.93
UBR1-203ENST00000562173 CRYGAP11844 174 aa2.97□□□□□ -1.93
UBR1-203ENST00000562173 PFN2P35080 140 aa2.97□□□□□ -1.93
UBR1-203ENST00000562173 RPL7L1Q6DKI1 246 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms