RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 INAFM2P0DMQ5 153 aa9.92□□□□□ -0.82
VPS9D1-202ENST00000561976 C11orf44Q8N8P7 122 aa9.92□□□□□ -0.82
VPS9D1-202ENST00000561976 A0A1W2PRX2 142 aa9.92□□□□□ -0.82
VPS9D1-202ENST00000561976 COX7B2Q8TF08 81 aa9.92□□□□□ -0.82
VPS9D1-202ENST00000561976 SND1-IT1Q9HBX3 110 aa9.92□□□□□ -0.82
VPS9D1-202ENST00000561976 PF4P02776 101 aa9.91□□□□□ -0.82
VPS9D1-202ENST00000561976 MALP21145 153 aa9.91□□□□□ -0.82
VPS9D1-202ENST00000561976 LINC00158P58513 81 aa9.91□□□□□ -0.82
VPS9D1-202ENST00000561976 MYO18BQ8IUG5 2567 aa9.91□□□□□ -0.82
VPS9D1-202ENST00000561976 CENPEQ02224 2701 aa9.91□□□□□ -0.82
VPS9D1-202ENST00000561976 DNAL4O96015 105 aa9.91□□□□□ -0.82
VPS9D1-202ENST00000561976 RPL28P46779 137 aaKnown RBP9.91□□□□□ -0.82
VPS9D1-202ENST00000561976 C5orf47Q569G3 176 aa9.91□□□□□ -0.82
VPS9D1-202ENST00000561976 C22orf24Q9Y442 160 aa9.91□□□□□ -0.82
VPS9D1-202ENST00000561976 TRGV2A0A075B6R0 118 aa9.9□□□□□ -0.82
VPS9D1-202ENST00000561976 FAM222AQ5U5X8 452 aa9.9□□□□□ -0.82
VPS9D1-202ENST00000561976 LINC00337Q8N6G1 96 aa9.9□□□□□ -0.82
VPS9D1-202ENST00000561976 LOC100131303A0A0U1RQF7 123 aa9.9□□□□□ -0.83
VPS9D1-202ENST00000561976 ACACBO00763 2458 aa9.9□□□□□ -0.83
VPS9D1-202ENST00000561976 CHD6Q8TD26 2715 aa9.89□□□□□ -0.83
VPS9D1-202ENST00000561976 IGKV2-28A0A075B6P5 120 aa9.88□□□□□ -0.83
VPS9D1-202ENST00000561976 TRAV25A0A0B4J276 109 aa9.88□□□□□ -0.83
VPS9D1-202ENST00000561976 IGKV2D-28P01615 120 aa9.88□□□□□ -0.83
VPS9D1-202ENST00000561976 TMEM126AQ9H061 195 aa9.88□□□□□ -0.83
VPS9D1-202ENST00000561976 FAM208BQ5VWN6 2430 aa9.88□□□□□ -0.83
VPS9D1-202ENST00000561976 C9orf153Q5TBE3 101 aa9.87□□□□□ -0.83
VPS9D1-202ENST00000561976 SMIM11BQ8TCY0 68 aa9.87□□□□□ -0.83
VPS9D1-202ENST00000561976 A0A087WYN8 130 aa9.86□□□□□ -0.83
VPS9D1-202ENST00000561976 SDIM1Q6ZPB5 146 aa9.86□□□□□ -0.83
VPS9D1-202ENST00000561976 OVOL2Q9BRP0 275 aa9.86□□□□□ -0.83
VPS9D1-202ENST00000561976 TEX15Q9BXT5 2789 aa9.86□□□□□ -0.83
VPS9D1-202ENST00000561976 TRGV4A0A0C4DH28 118 aa9.86□□□□□ -0.83
VPS9D1-202ENST00000561976 PFN2P35080 140 aa9.86□□□□□ -0.83
VPS9D1-202ENST00000561976 ATP5G1P05496 136 aa9.85□□□□□ -0.83
VPS9D1-202ENST00000561976 C3orf22Q8N5N4 141 aa9.85□□□□□ -0.83
VPS9D1-202ENST00000561976 CXCL5P42830 114 aa9.85□□□□□ -0.83
VPS9D1-202ENST00000561976 CCL18P55774 89 aa9.85□□□□□ -0.83
VPS9D1-202ENST00000561976 OR13C6PQ8NH95 151 aa9.85□□□□□ -0.83
VPS9D1-202ENST00000561976 C14orf132Q9NPU4 83 aa9.85□□□□□ -0.83
VPS9D1-202ENST00000561976 IGSF10Q6WRI0 2623 aa9.85□□□□□ -0.83
VPS9D1-202ENST00000561976 IGLV4-60A0A075B6I1 120 aa9.84□□□□□ -0.83
VPS9D1-202ENST00000561976 CCL24O00175 119 aa9.84□□□□□ -0.83
VPS9D1-202ENST00000561976 FBN2P35556 2912 aa9.84□□□□□ -0.83
VPS9D1-202ENST00000561976 PAX4O43316 350 aa9.84□□□□□ -0.83
VPS9D1-202ENST00000561976 RPL35AP18077 110 aaKnown RBP9.84□□□□□ -0.83
VPS9D1-202ENST00000561976 C5orf38Q86SI9 138 aa9.84□□□□□ -0.83
VPS9D1-202ENST00000561976 CUBNO60494 3623 aa9.84□□□□□ -0.83
VPS9D1-202ENST00000561976 UQCRQO14949 82 aa9.83□□□□□ -0.84
VPS9D1-202ENST00000561976 C16orf74Q96GX8 76 aa9.83□□□□□ -0.84
VPS9D1-202ENST00000561976 TLN2Q9Y4G6 2542 aa9.83□□□□□ -0.84
VPS9D1-202ENST00000561976 TRBV6-4A0A1B0GX49 114 aa9.83□□□□□ -0.84
VPS9D1-202ENST00000561976 H0YGX0 51 aa9.83□□□□□ -0.84
VPS9D1-202ENST00000561976 C11orf68Q9H3H3 251 aaKnown RBP9.83□□□□□ -0.84
VPS9D1-202ENST00000561976 CR1P17927 2039 aa9.83□□□□□ -0.84
VPS9D1-202ENST00000561976 EPG5Q9HCE0 2579 aa9.83□□□□□ -0.84
VPS9D1-202ENST00000561976 NAV2Q8IVL1 2488 aa9.83□□□□□ -0.84
VPS9D1-202ENST00000561976 LECT2O14960 151 aa9.82□□□□□ -0.84
VPS9D1-202ENST00000561976 C9orf129Q5T035 196 aaKnown RBP9.82□□□□□ -0.84
VPS9D1-202ENST00000561976 WFDC10AQ9H1F0 79 aa9.82□□□□□ -0.84
VPS9D1-202ENST00000561976 PTPN13Q12923 2485 aa9.82□□□□□ -0.84
VPS9D1-202ENST00000561976 PLA2G2AP14555 144 aa9.82□□□□□ -0.84
VPS9D1-202ENST00000561976 IGHV3OR16-9A0A0B4J2B5 98 aa9.81□□□□□ -0.84
VPS9D1-202ENST00000561976 IBA57-AS1B1ANH7 110 aa9.81□□□□□ -0.84
VPS9D1-202ENST00000561976 JMJD1CQ15652 2540 aa9.81□□□□□ -0.84
VPS9D1-202ENST00000561976 TRBV6-8A0A0A6YYG3 113 aa9.81□□□□□ -0.84
VPS9D1-202ENST00000561976 KRTAP10-9P60411 292 aa9.81□□□□□ -0.84
VPS9D1-202ENST00000561976 PLAC8L1A1L4L8 177 aa9.8□□□□□ -0.84
VPS9D1-202ENST00000561976 GIG44P09565 113 aaPredicted RBP9.8□□□□□ -0.84
VPS9D1-202ENST00000561976 ABCA12Q86UK0 2595 aa9.8□□□□□ -0.84
VPS9D1-202ENST00000561976 LRRC75A-AS1Q8N1F1 130 aa9.8□□□□□ -0.84
VPS9D1-202ENST00000561976 SLPIP03973 132 aa9.8□□□□□ -0.84
VPS9D1-202ENST00000561976 C6orf226Q5I0X4 101 aa9.8□□□□□ -0.84
VPS9D1-202ENST00000561976 LINC00526Q96FQ7 95 aa9.8□□□□□ -0.84
VPS9D1-202ENST00000561976 A0A087WZ39 114 aa9.79□□□□□ -0.84
VPS9D1-202ENST00000561976 IGKV3D-7A0A0C4DH55 119 aa9.79□□□□□ -0.84
VPS9D1-202ENST00000561976 SONP18583 2426 aaKnown RBP9.79□□□□□ -0.84
VPS9D1-202ENST00000561976 LRRK2Q5S007 2527 aa9.79□□□□□ -0.84
VPS9D1-202ENST00000561976 SMIM9A6NGZ8 99 aa9.79□□□□□ -0.84
VPS9D1-202ENST00000561976 NCR3O14931 201 aa9.78□□□□□ -0.84
VPS9D1-202ENST00000561976 COX7CP15954 63 aa9.78□□□□□ -0.84
VPS9D1-202ENST00000561976 DEFB113Q30KQ7 82 aa9.78□□□□□ -0.84
VPS9D1-202ENST00000561976 KLK5Q9Y337 293 aaPredicted RBP9.77□□□□□ -0.84
VPS9D1-202ENST00000561976 SETD2Q9BYW2 2564 aaPredicted RBP9.77□□□□□ -0.85
VPS9D1-202ENST00000561976 ATOX1O00244 68 aa9.77□□□□□ -0.85
VPS9D1-202ENST00000561976 FHL2Q14192 279 aa9.77□□□□□ -0.85
VPS9D1-202ENST00000561976 LINC00846Q9NV44 126 aa9.77□□□□□ -0.85
VPS9D1-202ENST00000561976 LOC107984640A0A0U1RRK4 108 aa9.76□□□□□ -0.85
VPS9D1-202ENST00000561976 DNAJC9-AS1A6NH13 148 aa9.76□□□□□ -0.85
VPS9D1-202ENST00000561976 CMC4P56277 68 aaPredicted RBP9.76□□□□□ -0.85
VPS9D1-202ENST00000561976 ZFYVE26Q68DK2 2539 aa9.76□□□□□ -0.85
VPS9D1-202ENST00000561976 LINC00959A0A1B0GUT2 108 aa9.76□□□□□ -0.85
VPS9D1-202ENST00000561976 XCL1P47992 114 aa9.76□□□□□ -0.85
VPS9D1-202ENST00000561976 USP24Q9UPU5 2620 aa9.75□□□□□ -0.85
VPS9D1-202ENST00000561976 TMEM86BQ8N661 226 aa9.75□□□□□ -0.85
VPS9D1-202ENST00000561976 ORMDL1Q9P0S3 153 aa9.75□□□□□ -0.85
VPS9D1-202ENST00000561976 PRB1P04280 392 aa9.75□□□□□ -0.85
VPS9D1-202ENST00000561976 DEFB130BP0DP73 79 aa9.75□□□□□ -0.85
VPS9D1-202ENST00000561976 DEFB130AP0DP74 79 aa9.75□□□□□ -0.85
VPS9D1-202ENST00000561976 OBSCN-AS1Q96MR7 158 aa9.75□□□□□ -0.85
VPS9D1-202ENST00000561976 SETXQ7Z333 2677 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms