RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 PIEZO1Q92508 2521 aa7.52□□□□□ -1.21
GTF3C1-202ENST00000561623 TSPEAR-AS2P59090 65 aa7.52□□□□□ -1.21
GTF3C1-202ENST00000561623 SMIM9A6NGZ8 99 aa7.52□□□□□ -1.21
GTF3C1-202ENST00000561623 LOC100131303A0A0U1RQF7 123 aa7.52□□□□□ -1.21
GTF3C1-202ENST00000561623 SERTAD4-AS1Q5TG53 156 aa7.52□□□□□ -1.21
GTF3C1-202ENST00000561623 HCFC1P51610 2035 aa7.51□□□□□ -1.21
GTF3C1-202ENST00000561623 DEFB114Q30KQ6 69 aa7.51□□□□□ -1.21
GTF3C1-202ENST00000561623 Q6JHZ5 121 aa7.51□□□□□ -1.21
GTF3C1-202ENST00000561623 CEP192Q8TEP8 1941 aa7.51□□□□□ -1.21
GTF3C1-202ENST00000561623 FAM19A3Q7Z5A8 133 aa7.51□□□□□ -1.21
GTF3C1-202ENST00000561623 IGIPA6NJ69 53 aa7.51□□□□□ -1.21
GTF3C1-202ENST00000561623 FAM30AQ9NZY2 134 aa7.51□□□□□ -1.21
GTF3C1-202ENST00000561623 NDUFC1O43677 76 aa7.5□□□□□ -1.21
GTF3C1-202ENST00000561623 IGLV4-69A0A075B6H9 119 aa7.5□□□□□ -1.21
GTF3C1-202ENST00000561623 TRAV10A0A0B4J240 114 aa7.5□□□□□ -1.21
GTF3C1-202ENST00000561623 ATP5EP56381 51 aaPredicted RBP7.5□□□□□ -1.21
GTF3C1-202ENST00000561623 SPINK6Q6UWN8 80 aa7.5□□□□□ -1.21
GTF3C1-202ENST00000561623 WFDC13Q8IUB5 93 aa7.5□□□□□ -1.21
GTF3C1-202ENST00000561623 TNFRSF13BO14836 293 aaPredicted RBP7.5□□□□□ -1.21
GTF3C1-202ENST00000561623 FAM19A1Q7Z5A9 133 aa7.5□□□□□ -1.21
GTF3C1-202ENST00000561623 IGKV2-28A0A075B6P5 120 aa7.5□□□□□ -1.21
GTF3C1-202ENST00000561623 IGKV2D-28P01615 120 aa7.5□□□□□ -1.21
GTF3C1-202ENST00000561623 EBI3Q14213 229 aa7.49□□□□□ -1.21
GTF3C1-202ENST00000561623 SOSTDC1Q6X4U4 206 aa7.49□□□□□ -1.21
GTF3C1-202ENST00000561623 A0A096LNJ9 63 aa7.49□□□□□ -1.21
GTF3C1-202ENST00000561623 FAM19A5Q7Z5A7 132 aaPredicted RBP7.49□□□□□ -1.21
GTF3C1-202ENST00000561623 CNFNQ9BYD5 112 aa7.49□□□□□ -1.21
GTF3C1-202ENST00000561623 UBE2D2P62837 147 aa7.49□□□□□ -1.21
GTF3C1-202ENST00000561623 DSCAMO60469 2012 aa7.48□□□□□ -1.21
GTF3C1-202ENST00000561623 LOC107984640A0A0U1RRK4 108 aa7.48□□□□□ -1.21
GTF3C1-202ENST00000561623 ATG2AQ2TAZ0 1938 aa7.48□□□□□ -1.21
GTF3C1-202ENST00000561623 MRPS36P82909 103 aaKnown RBP7.48□□□□□ -1.21
GTF3C1-202ENST00000561623 ZNF580Q9UK33 172 aa7.48□□□□□ -1.21
GTF3C1-202ENST00000561623 KLLNB2CW77 178 aa7.48□□□□□ -1.21
GTF3C1-202ENST00000561623 CHD8Q9HCK8 2581 aa7.48□□□□□ -1.21
GTF3C1-202ENST00000561623 FBXL19-AS1Q494R0 122 aa7.47□□□□□ -1.21
GTF3C1-202ENST00000561623 CELA1Q9UNI1 258 aa7.47□□□□□ -1.21
GTF3C1-202ENST00000561623 MIFP14174 115 aa7.47□□□□□ -1.21
GTF3C1-202ENST00000561623 BBC3Q96PG8 261 aaPredicted RBP7.47□□□□□ -1.21
GTF3C1-202ENST00000561623 A0A087WYN8 130 aa7.46□□□□□ -1.21
GTF3C1-202ENST00000561623 TRBV6-4A0A1B0GX49 114 aa7.46□□□□□ -1.21
GTF3C1-202ENST00000561623 ADAMTSL4-AS1Q5T5F5 129 aa7.46□□□□□ -1.21
GTF3C1-202ENST00000561623 ARHGAP32A7KAX9 2087 aa7.46□□□□□ -1.21
GTF3C1-202ENST00000561623 SMIM26A0A096LP01 95 aa7.46□□□□□ -1.22
GTF3C1-202ENST00000561623 LINC00959A0A1B0GUT2 108 aa7.46□□□□□ -1.22
GTF3C1-202ENST00000561623 EDN2P20800 178 aa7.46□□□□□ -1.22
GTF3C1-202ENST00000561623 LRRK2Q5S007 2527 aa7.45□□□□□ -1.22
GTF3C1-202ENST00000561623 ZFYVE26Q68DK2 2539 aa7.45□□□□□ -1.22
GTF3C1-202ENST00000561623 C18orf65Q6ZTR6 163 aa7.45□□□□□ -1.22
GTF3C1-202ENST00000561623 Q8N6K4 173 aa7.45□□□□□ -1.22
GTF3C1-202ENST00000561623 IGLV5-52A0A0A0MRZ9 124 aa7.45□□□□□ -1.22
GTF3C1-202ENST00000561623 COX6A2Q02221 97 aa7.45□□□□□ -1.22
GTF3C1-202ENST00000561623 Q6YL49 198 aa7.44□□□□□ -1.22
GTF3C1-202ENST00000561623 WFDC10AQ9H1F0 79 aa7.44□□□□□ -1.22
GTF3C1-202ENST00000561623 CDIP1Q9H305 208 aa7.44□□□□□ -1.22
GTF3C1-202ENST00000561623 PPDPFQ9H3Y8 114 aa7.44□□□□□ -1.22
GTF3C1-202ENST00000561623 LYRM9A8MSI8 78 aa7.44□□□□□ -1.22
GTF3C1-202ENST00000561623 LINC00242Q5T6M2 205 aa7.43□□□□□ -1.22
GTF3C1-202ENST00000561623 LINC00337Q8N6G1 96 aa7.43□□□□□ -1.22
GTF3C1-202ENST00000561623 NANOS2P60321 138 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-202ENST00000561623 CD164L2Q6UWJ8 174 aa7.43□□□□□ -1.22
GTF3C1-202ENST00000561623 TRAV7A0A075B6U4 112 aa7.43□□□□□ -1.22
GTF3C1-202ENST00000561623 C1orf134Q5TEV5 83 aa7.43□□□□□ -1.22
GTF3C1-202ENST00000561623 CDC42SE2Q9NRR3 84 aa7.43□□□□□ -1.22
GTF3C1-202ENST00000561623 RPL37AP8A6NKH3 93 aa7.43□□□□□ -1.22
GTF3C1-202ENST00000561623 PRR3P79522 188 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-202ENST00000561623 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
GTF3C1-202ENST00000561623 RETNLBQ9BQ08 111 aa7.42□□□□□ -1.22
GTF3C1-202ENST00000561623 NTM-AS1Q6ZSK4 140 aa7.42□□□□□ -1.22
GTF3C1-202ENST00000561623 CSDC2Q9Y534 153 aaKnown RBP7.42□□□□□ -1.22
GTF3C1-202ENST00000561623 EML5Q05BV3 1969 aa7.42□□□□□ -1.22
GTF3C1-202ENST00000561623 PSMG3-AS1Q96PY0 264 aa7.42□□□□□ -1.22
GTF3C1-202ENST00000561623 LTBP2Q14767 1821 aa7.42□□□□□ -1.22
GTF3C1-202ENST00000561623 ZNF73O43830 326 aaPredicted RBP7.42□□□□□ -1.22
GTF3C1-202ENST00000561623 SYCNQ0VAF6 134 aa7.42□□□□□ -1.22
GTF3C1-202ENST00000561623 MUC4Q99102 2169 aa7.42□□□□□ -1.22
GTF3C1-202ENST00000561623 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
GTF3C1-202ENST00000561623 NCOR2Q9Y618 2525 aa7.41□□□□□ -1.22
GTF3C1-202ENST00000561623 M0R378 163 aa7.41□□□□□ -1.22
GTF3C1-202ENST00000561623 C9orf116Q5BN46 136 aaPredicted RBP7.41□□□□□ -1.22
GTF3C1-202ENST00000561623 FSTL3O95633 263 aa7.4□□□□□ -1.22
GTF3C1-202ENST00000561623 PRYO14603 147 aa7.4□□□□□ -1.22
GTF3C1-202ENST00000561623 Q8N814 137 aa7.4□□□□□ -1.22
GTF3C1-202ENST00000561623 KRTAP10-9P60411 292 aa7.4□□□□□ -1.22
GTF3C1-202ENST00000561623 C11orf71Q6IPW1 123 aa7.4□□□□□ -1.22
GTF3C1-202ENST00000561623 CHCHD7Q9BUK0 85 aa7.4□□□□□ -1.22
GTF3C1-202ENST00000561623 RPL28P46779 137 aaKnown RBP7.39□□□□□ -1.23
GTF3C1-202ENST00000561623 JMJD1CQ15652 2540 aa7.39□□□□□ -1.23
GTF3C1-202ENST00000561623 Q6ZVQ6 151 aa7.39□□□□□ -1.23
GTF3C1-202ENST00000561623 ANKHD1Q8IWZ3 2542 aaKnown RBP7.39□□□□□ -1.23
GTF3C1-202ENST00000561623 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
GTF3C1-202ENST00000561623 ZNF702PQ9H963 129 aa7.38□□□□□ -1.23
GTF3C1-202ENST00000561623 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.38□□□□□ -1.23
GTF3C1-202ENST00000561623 Q8IZM0 81 aa7.38□□□□□ -1.23
GTF3C1-202ENST00000561623 PSPHP1O15172 72 aa7.38□□□□□ -1.23
GTF3C1-202ENST00000561623 DHRS4-AS1Q9P1J3 65 aa7.37□□□□□ -1.23
GTF3C1-202ENST00000561623 COX17Q14061 63 aa7.37□□□□□ -1.23
GTF3C1-202ENST00000561623 CYSRT1A8MQ03 144 aa7.37□□□□□ -1.23
GTF3C1-202ENST00000561623 Q8N3U1 123 aa7.37□□□□□ -1.23
GTF3C1-202ENST00000561623 IGLV1-40P01703 118 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 250.4 ms