RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CTAG1AP78358 180 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 IAH1Q2TAA2 248 aaPredicted RBP1.9□□□□□ -2.11
HERC1-215ENST00000561436 KHDC3LQ587J8 217 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 ADM2Q7Z4H4 148 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 EXOC3-AS1Q8N2X6 119 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 MCFD2Q8NI22 146 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 FXYD5Q96DB9 178 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 FAM167A-AS1Q96KT0 104 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 TREM1Q9NP99 234 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 OTORQ9NRC9 128 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 RBM12B-AS1Q9P1G2 102 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 PSORS1C2Q9UIG4 136 aa1.9□□□□□ -2.11
HERC1-215ENST00000561436 FLG2Q5D862 2391 aaPredicted RBP1.9□□□□□ -2.11
HERC1-215ENST00000561436 TRBV7-3A0A075B6L6 115 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 IGKV2-40A0A087WW87 121 aaPredicted RBP1.89□□□□□ -2.11
HERC1-215ENST00000561436 TRBV6-8A0A0A6YYG3 113 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 LECT2O14960 151 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 GNRH2O43555 120 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 ATP6V1G2O95670 118 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 IGKV2D-40P01614 121 aaPredicted RBP1.89□□□□□ -2.11
HERC1-215ENST00000561436 TYMSP04818 313 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 RANP62826 216 aaKnown RBP1.89□□□□□ -2.11
HERC1-215ENST00000561436 PYDC2Q56P42 97 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 PDZD11Q5EBL8 140 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 MIC13Q5XKP0 118 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 ENHOQ6UWT2 76 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 SPACA4Q8TDM5 124 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 UBE2WQ96B02 151 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 DPH3Q96FX2 82 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 MRAP2Q96G30 205 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 FAM210AQ96ND0 272 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 NPCDR1Q9BY65 106 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 NMES1Q9C002 83 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 NKX6-2Q9C056 277 aaPredicted RBP1.89□□□□□ -2.11
HERC1-215ENST00000561436 IL36BQ9NZH7 164 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 GSKIPQ9P0R6 139 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 FAT1Q14517 4588 aa1.89□□□□□ -2.11
HERC1-215ENST00000561436 IGLV10-54A0A075B6I4 117 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 FABP5P3A8MUU1 101 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 NDUFS6O75380 124 aaKnown RBP1.88□□□□□ -2.11
HERC1-215ENST00000561436 IFNA7P01567 189 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 TCRBP04435 133 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 CXCL1P09341 107 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 PYYP10082 97 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 PRB4P10163 310 aaPredicted RBP1.88□□□□□ -2.11
HERC1-215ENST00000561436 HRES1P13985 223 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 FGF7P21781 194 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 S100A4P26447 101 aaKnown RBP1.88□□□□□ -2.11
HERC1-215ENST00000561436 S100A5P33763 92 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 RAB4BP61018 213 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 UBE2D3P61077 147 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 UBE2D2P62837 147 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 FAM162BQ5T6X4 162 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 ZFP82Q8N141 532 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 FER1L6-AS1Q8NA97 138 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 GATD1Q8NB37 220 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 SUN5Q8TC36 379 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 TSKUQ8WUA8 353 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 SFRP2Q96HF1 295 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 TCEAL7Q9BRU2 100 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 C11orf1Q9H5F2 150 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 R4GN34 69 aa1.88□□□□□ -2.11
HERC1-215ENST00000561436 A0A0B4J2C4 111 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 UBE2L5PA0A1B0GUS4 154 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 CCDC160A6NGH7 325 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 TMEM262E9PQX1 116 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 HMGB3O15347 200 aaKnown RBP1.87□□□□□ -2.11
HERC1-215ENST00000561436 CST7O76096 145 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 ANGP03950 147 aaKnown RBP1.87□□□□□ -2.11
HERC1-215ENST00000561436 PET100P0DJ07 73 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 RNASE3P12724 160 aaKnown RBP1.87□□□□□ -2.11
HERC1-215ENST00000561436 S100A2P29034 98 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 UBE2L3P68036 154 aaKnown RBP1.87□□□□□ -2.11
HERC1-215ENST00000561436 IQCJQ1A5X6 159 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 KRTAP26-1Q6PEX3 210 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 GOLT1AQ6ZVE7 132 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 MIR17HGQ75NE6 70 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 TMEM75Q8N9X5 138 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 C5orf17Q8NAS9 161 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 OR5C1Q8NGR4 320 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 DNAJC30Q96LL9 226 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 HIGD2AQ9BW72 106 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 WDR61Q9GZS3 305 aaKnown RBP1.87□□□□□ -2.11
HERC1-215ENST00000561436 TMEM167BQ9NRX6 74 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 ZFP30Q9Y2G7 519 aa1.87□□□□□ -2.11
HERC1-215ENST00000561436 CARHSP1Q9Y2V2 147 aaKnown RBP1.87□□□□□ -2.11
HERC1-215ENST00000561436 TRBV25-1A0A075B6N4 114 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 TRAV26-2A0A0B4J265 109 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 TRBV6-1A0A0K0K1D8 114 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 A0A1W2PRE2 83 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 FAM24AA6NFZ4 105 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 TCRAP04437 139 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 SPCS2Q15005 226 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 TRIQKQ629K1 86 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 OR2T35Q8NGX2 323 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 HIST1H2BAQ96A08 127 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 EPDR1Q9UM22 224 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 V9GYH0 126 aa1.86□□□□□ -2.11
HERC1-215ENST00000561436 IGHV3-73A0A0B4J1V6 119 aa1.85□□□□□ -2.11
HERC1-215ENST00000561436 TRAV1-1A0A0B4J248 108 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms