RNA–Protein interactions for RNA: ENST00000561423.2

PRKXP1-201, Transcript of PRKX pseudogene 1, humanhuman

BASIC

Gene PRKXP1, Length 1,122 nt, Biotype processed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKXP1-201ENST00000561423 CLLU1Q5K131 121 aa8.53□□□□□ -1.04
PRKXP1-201ENST00000561423 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
PRKXP1-201ENST00000561423 NAT8Q9UHE5 227 aa8.53□□□□□ -1.04
PRKXP1-201ENST00000561423 IGHV3OR16-9A0A0B4J2B5 98 aa8.52□□□□□ -1.05
PRKXP1-201ENST00000561423 PPP1R2P9O14990 202 aa8.52□□□□□ -1.05
PRKXP1-201ENST00000561423 RPL39P62891 51 aaKnown RBP8.52□□□□□ -1.05
PRKXP1-201ENST00000561423 TMEM241Q24JQ0 296 aa8.52□□□□□ -1.05
PRKXP1-201ENST00000561423 MRPL51Q4U2R6 128 aaKnown RBP8.52□□□□□ -1.05
PRKXP1-201ENST00000561423 KRTAP7-1Q8IUC3 87 aa8.52□□□□□ -1.05
PRKXP1-201ENST00000561423 TMEM18Q96B42 140 aa8.52□□□□□ -1.05
PRKXP1-201ENST00000561423 IMMP2LQ96T52 175 aa8.52□□□□□ -1.05
PRKXP1-201ENST00000561423 C6orf48Q9UBA6 75 aa8.52□□□□□ -1.05
PRKXP1-201ENST00000561423 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
PRKXP1-201ENST00000561423 NDUFA1O15239 70 aa8.51□□□□□ -1.05
PRKXP1-201ENST00000561423 TLX1NBP0CAT3 122 aa8.51□□□□□ -1.05
PRKXP1-201ENST00000561423 FAM104BQ5XKR9 115 aa8.51□□□□□ -1.05
PRKXP1-201ENST00000561423 UNQ6190/PRO20217Q6UXQ8 127 aa8.51□□□□□ -1.05
PRKXP1-201ENST00000561423 F8WDY8 70 aa8.5□□□□□ -1.05
PRKXP1-201ENST00000561423 PNRC1Q12796 327 aaPredicted RBP8.5□□□□□ -1.05
PRKXP1-201ENST00000561423 RPL32P62910 135 aaKnown RBP8.49□□□□□ -1.05
PRKXP1-201ENST00000561423 GAGE2EQ4V326 116 aa8.49□□□□□ -1.05
PRKXP1-201ENST00000561423 UQCC3Q6UW78 93 aa8.49□□□□□ -1.05
PRKXP1-201ENST00000561423 C20orf78Q9BR46 151 aa8.49□□□□□ -1.05
PRKXP1-201ENST00000561423 GAGE2DQ9UEU5 116 aa8.49□□□□□ -1.05
PRKXP1-201ENST00000561423 TRBV24-1A0A075B6N3 115 aa8.48□□□□□ -1.05
PRKXP1-201ENST00000561423 M0QXV9 152 aa8.48□□□□□ -1.05
PRKXP1-201ENST00000561423 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
PRKXP1-201ENST00000561423 NAT8BQ9UHF3 227 aa8.48□□□□□ -1.05
PRKXP1-201ENST00000561423 LINC00862A6NCI5 91 aa8.47□□□□□ -1.05
PRKXP1-201ENST00000561423 IFITM10A6NMD0 228 aa8.47□□□□□ -1.05
PRKXP1-201ENST00000561423 RPL23P62829 140 aaKnown RBP8.47□□□□□ -1.05
PRKXP1-201ENST00000561423 HBBP68871 147 aa8.47□□□□□ -1.05
PRKXP1-201ENST00000561423 MRPS36P82909 103 aaKnown RBP8.47□□□□□ -1.05
PRKXP1-201ENST00000561423 KIAA0087Q14695 138 aa8.47□□□□□ -1.05
PRKXP1-201ENST00000561423 ADIRFQ15847 76 aa8.47□□□□□ -1.05
PRKXP1-201ENST00000561423 PRR4Q16378 134 aa8.47□□□□□ -1.05
PRKXP1-201ENST00000561423 SMIM2Q9BVW6 85 aa8.47□□□□□ -1.05
PRKXP1-201ENST00000561423 A0A1B0GW15 77 aa8.46□□□□□ -1.06
PRKXP1-201ENST00000561423 TNFRSF6BO95407 300 aa8.46□□□□□ -1.06
PRKXP1-201ENST00000561423 CKS2P33552 79 aa8.46□□□□□ -1.06
PRKXP1-201ENST00000561423 UBE2D1P51668 147 aa8.46□□□□□ -1.06
PRKXP1-201ENST00000561423 UBE2BP63146 152 aa8.46□□□□□ -1.06
PRKXP1-201ENST00000561423 TCAPO15273 167 aa8.45□□□□□ -1.06
PRKXP1-201ENST00000561423 S100A8P05109 93 aa8.45□□□□□ -1.06
PRKXP1-201ENST00000561423 TGIF2-C20orf24A0A0A6YYL0 155 aa8.44□□□□□ -1.06
PRKXP1-201ENST00000561423 SMIM27A0A1W2PRY6 76 aa8.44□□□□□ -1.06
PRKXP1-201ENST00000561423 C9JQL5 133 aa8.44□□□□□ -1.06
PRKXP1-201ENST00000561423 D6R8Y8 96 aa8.44□□□□□ -1.06
PRKXP1-201ENST00000561423 NPYP01303 97 aa8.44□□□□□ -1.06
PRKXP1-201ENST00000561423 SRSF3P84103 164 aaKnown RBP8.44□□□□□ -1.06
PRKXP1-201ENST00000561423 C9orf129Q5T035 196 aaKnown RBP8.44□□□□□ -1.06
PRKXP1-201ENST00000561423 C2orf82Q6UX34 121 aa8.44□□□□□ -1.06
PRKXP1-201ENST00000561423 RPL13AP40429 203 aaKnown RBP8.43□□□□□ -1.06
PRKXP1-201ENST00000561423 FAT4Q6V0I7 4981 aa8.42□□□□□ -1.06
PRKXP1-201ENST00000561423 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
PRKXP1-201ENST00000561423 NDUFC2-KCTD14E9PQ53 114 aa8.42□□□□□ -1.06
PRKXP1-201ENST00000561423 LINC00242Q5T6M2 205 aa8.42□□□□□ -1.06
PRKXP1-201ENST00000561423 ANAPC16Q96DE5 110 aa8.42□□□□□ -1.06
PRKXP1-201ENST00000561423 MT-ND4LP03901 98 aa8.41□□□□□ -1.06
PRKXP1-201ENST00000561423 IFITM2Q01629 132 aa8.41□□□□□ -1.06
PRKXP1-201ENST00000561423 MRPL54Q6P161 138 aaKnown RBP8.41□□□□□ -1.06
PRKXP1-201ENST00000561423 IGLV4-3A0A075B6K6 122 aa8.4□□□□□ -1.06
PRKXP1-201ENST00000561423 A0A1B0GXF2 115 aa8.4□□□□□ -1.06
PRKXP1-201ENST00000561423 IFI27P40305 119 aaPredicted RBP8.4□□□□□ -1.06
PRKXP1-201ENST00000561423 ATP5L2Q7Z4Y8 100 aa8.4□□□□□ -1.06
PRKXP1-201ENST00000561423 CARHSP1Q9Y2V2 147 aaKnown RBP8.4□□□□□ -1.06
PRKXP1-201ENST00000561423 ZNF861PO60384 105 aa8.39□□□□□ -1.07
PRKXP1-201ENST00000561423 PACRGQ96M98 296 aaPredicted RBP8.39□□□□□ -1.07
PRKXP1-201ENST00000561423 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
PRKXP1-201ENST00000561423 PYGO1Q9Y3Y4 419 aa8.39□□□□□ -1.07
PRKXP1-201ENST00000561423 F8W036 122 aa8.38□□□□□ -1.07
PRKXP1-201ENST00000561423 SEC11CQ9BY50 192 aa8.38□□□□□ -1.07
PRKXP1-201ENST00000561423 MUC17Q685J3 4493 aa8.37□□□□□ -1.07
PRKXP1-201ENST00000561423 TMEM218A2RU14 115 aa8.37□□□□□ -1.07
PRKXP1-201ENST00000561423 TSPAN13O95857 204 aa8.37□□□□□ -1.07
PRKXP1-201ENST00000561423 PPBPP02775 128 aa8.37□□□□□ -1.07
PRKXP1-201ENST00000561423 ZC2HC1BQ5TFG8 222 aa8.37□□□□□ -1.07
PRKXP1-201ENST00000561423 TMEM141Q96I45 108 aa8.37□□□□□ -1.07
PRKXP1-201ENST00000561423 A0A0U1RQV1 116 aa8.36□□□□□ -1.07
PRKXP1-201ENST00000561423 RAB5AP20339 215 aa8.36□□□□□ -1.07
PRKXP1-201ENST00000561423 ORMDL3Q8N138 153 aa8.36□□□□□ -1.07
PRKXP1-201ENST00000561423 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
PRKXP1-201ENST00000561423 LINC00469Q8N7U9 141 aa8.36□□□□□ -1.07
PRKXP1-201ENST00000561423 CTDSP1Q9GZU7 261 aa8.36□□□□□ -1.07
PRKXP1-201ENST00000561423 C22orf24Q9Y442 160 aa8.36□□□□□ -1.07
PRKXP1-201ENST00000561423 A0A087X002 238 aa8.35□□□□□ -1.07
PRKXP1-201ENST00000561423 NUPR1O60356 82 aa8.35□□□□□ -1.07
PRKXP1-201ENST00000561423 TEX43Q6ZNM6 134 aa8.35□□□□□ -1.07
PRKXP1-201ENST00000561423 TMEM136Q6ZRR5 245 aa8.35□□□□□ -1.07
PRKXP1-201ENST00000561423 LINC00173Q6ZV60 143 aa8.35□□□□□ -1.07
PRKXP1-201ENST00000561423 COMMD7Q86VX2 200 aa8.35□□□□□ -1.07
PRKXP1-201ENST00000561423 PRELID3AQ96N28 172 aa8.35□□□□□ -1.07
PRKXP1-201ENST00000561423 XAGE1AQ9HD64 81 aa8.35□□□□□ -1.07
PRKXP1-201ENST00000561423 TRAV9-1A0A075B6T8 112 aa8.34□□□□□ -1.07
PRKXP1-201ENST00000561423 TOMM7Q9P0U1 55 aa8.34□□□□□ -1.07
PRKXP1-201ENST00000561423 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
PRKXP1-201ENST00000561423 LOC389332A0A1B0GUA5 103 aa8.32□□□□□ -1.08
PRKXP1-201ENST00000561423 PRSS2P07478 247 aa8.32□□□□□ -1.08
PRKXP1-201ENST00000561423 RHEBQ15382 184 aa8.32□□□□□ -1.08
PRKXP1-201ENST00000561423 NDUFA5Q16718 116 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms