RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 SERP1Q9Y6X1 66 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 FAT1Q14517 4588 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 PI4KAP42356 2102 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 ZFHX3Q15911 3703 aa-0.44□□□□□ -2.48
HMBOX1-216ENST00000561377 SVEP1Q4LDE5 3571 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 PATJQ8NI35 1801 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 CPSF1Q10570 1443 aaKnown RBP-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 ITPR3Q14573 2671 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 QRICH2Q9H0J4 1663 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 ARPC5O15511 151 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 SSSCA1O60232 199 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 HIST1H1DP16402 221 aaKnown RBP-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 ARPC4P59998 168 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 BTG2P78543 158 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 C8orf59Q8N0T1 100 aaPredicted RBP-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 ARL11Q969Q4 196 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 FAM167A-AS1Q96KT0 104 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 UQCR10Q9UDW1 63 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 A0A0G2JMZ2 1700 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 DIP2CQ9Y2E4 1556 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 DOCK2Q92608 1830 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 PCLOQ9Y6V0 5065 aa-0.45□□□□□ -2.48
HMBOX1-216ENST00000561377 SHROOM2Q13796 1616 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 DNAH6Q9C0G6 4158 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 EHBP1L1Q8N3D4 1523 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 KLK9Q2XQG4 91 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 DEFB135Q30KP9 77 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 KRTAP6-2Q3LI66 62 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 MRPL54Q6P161 138 aaKnown RBP-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 COMMD6Q7Z4G1 85 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 MYOZ3Q8TDC0 251 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 SPRR4Q96PI1 79 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 PRO1933Q9H354 126 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 ZNF236Q9UL36 1845 aa-0.46□□□□□ -2.48
HMBOX1-216ENST00000561377 USP9YO00507 2555 aaPredicted RBP-0.47□□□□□ -2.48
HMBOX1-216ENST00000561377 TACC2O95359 2948 aa-0.47□□□□□ -2.48
HMBOX1-216ENST00000561377 MRC2Q9UBG0 1479 aa-0.47□□□□□ -2.48
HMBOX1-216ENST00000561377 LINC00959A0A1B0GUT2 108 aa-0.47□□□□□ -2.48
HMBOX1-216ENST00000561377 Q56UQ5 140 aa-0.47□□□□□ -2.48
HMBOX1-216ENST00000561377 C10orf113Q5VZT2 155 aa-0.47□□□□□ -2.48
HMBOX1-216ENST00000561377 LSM10Q969L4 123 aaKnown RBP-0.47□□□□□ -2.48
HMBOX1-216ENST00000561377 SPANXDQ9BXN6 97 aa-0.47□□□□□ -2.48
HMBOX1-216ENST00000561377 NXT2Q9NPJ8 142 aaKnown RBP-0.47□□□□□ -2.48
HMBOX1-216ENST00000561377 XRN1Q8IZH2 1706 aaKnown RBP-0.47□□□□□ -2.49
HMBOX1-216ENST00000561377 PKD1P98161 4303 aa-0.47□□□□□ -2.49
HMBOX1-216ENST00000561377 SPTBN4Q9H254 2564 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 DOCK1Q14185 1865 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 ARHGEF5Q12774 1597 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 TRANK1O15050 2925 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 MIF4GDA9UHW6 222 aaKnown RBP-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 APOC2P02655 101 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 IGLC1P0CG04 106 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 ATP5EP56381 51 aaPredicted RBP-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 UBA52P62987 128 aaKnown RBP-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 SELENOWP63302 87 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 C5orf38Q86SI9 138 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 CDC42SE2Q9NRR3 84 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 TEP1Q99973 2627 aaKnown RBP-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 HECTD1Q9ULT8 2610 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 KTN1Q86UP2 1357 aaKnown RBP-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 AKAP13Q12802 2813 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 C1orf167Q5SNV9 1468 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 DOPEY1Q5JWR5 2465 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 HMGXB3Q12766 1538 aa-0.48□□□□□ -2.49
HMBOX1-216ENST00000561377 REV3LO60673 3130 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 USH2AO75445 5202 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 TET3O43151 1660 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 FAM25AB3EWG3 89 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 FAM25CB3EWG5 89 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 FAM25GB3EWG6 89 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 F6UZH7 168 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 COX6CP09669 75 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 FGF7P21781 194 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 MT4P47944 62 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 FAM223AQ8IWN6 122 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 FDCSPQ8NFU4 85 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 LINC01600Q96MT4 127 aa-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 EDC4Q6P2E9 1401 aaKnown RBP-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.49□□□□□ -2.49
HMBOX1-216ENST00000561377 MYO18BQ8IUG5 2567 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 FASNP49327 2511 aaKnown RBP-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 UBE2L5PA0A1B0GUS4 154 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 CPSF4LA6NMK7 179 aaKnown RBP-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 CHKB-CPT1BH3BT56 60 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 SAA2P0DJI9 122 aaPredicted RBP-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 UBE2L3P68036 154 aaKnown RBP-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 CATR1Q13166 79 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 KRTAP20-2Q3LI61 65 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 MEIG1Q5JSS6 88 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 C9orf153Q5TBE3 101 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 C9orf62Q8N4C0 152 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 C1orf54Q8WWF1 131 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 TSLPQ969D9 159 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 LINC00470Q9BZP3 86 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 ARL2-SNX15V9GYD0 113 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 PRRC2CQ9Y520 2896 aaKnown RBP-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 A2ML1A8K2U0 1454 aa-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 NKTRP30414 1462 aaKnown RBP-0.5□□□□□ -2.49
HMBOX1-216ENST00000561377 MBD5Q9P267 1494 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms