RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 IBA57-AS1B1ANH7 110 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 K7EP13 123 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 M0R2N4 97 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 CKS2P33552 79 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 MPV17L2Q567V2 206 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 KRTAP26-1Q6PEX3 210 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 KCNIP4Q6PIL6 250 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 ORMDL3Q8N138 153 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 DEFB104AQ8WTQ1 72 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 SMIM2Q9BVW6 85 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 LAMTOR2Q9Y2Q5 125 aa3.93□□□□□ -1.78
LRRC28-220ENST00000561253 TRAV8-6A0A0B4J262 113 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 IGHV1-24A0A0C4DH33 117 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 LINC01546A6NGU7 62 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 COLCA2A8K830 154 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 I3L3M4 83 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 PPP1R17O96001 155 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 HLA-DQA1P01909 254 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 MT-ND6P03923 174 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 S100PP25815 95 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 COTL1Q14019 142 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 LAGE3Q14657 143 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 TMEM97Q5BJF2 176 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 TTC32Q5I0X7 151 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 C20orf203Q8NBC4 194 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 PRELID3AQ96N28 172 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 TMEM243Q9BU79 118 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 ST20Q9HBF5 79 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 PRR34Q9NV39 138 aa3.92□□□□□ -1.78
LRRC28-220ENST00000561253 IGLV4-60A0A075B6I1 120 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 TRBV25-1A0A075B6N4 114 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 A0A1B0GVY2 172 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 SCO1O75880 301 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 IGHV3-30P01768 117 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 IGHV3-33P01772 117 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 IGHV3-30-3P0DP02 117 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 IGHV3-30-5P0DP03 117 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 RBX1P62877 108 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 COX19Q49B96 90 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 ENHOQ6UWT2 76 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 MRPL52Q86TS9 123 aaKnown RBP3.91□□□□□ -1.78
LRRC28-220ENST00000561253 C6orf223Q8N319 242 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 C10orf126Q8N4M7 172 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 Q8N976 141 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 SMCO4Q9NRQ5 59 aa3.91□□□□□ -1.78
LRRC28-220ENST00000561253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.9□□□□□ -1.79
LRRC28-220ENST00000561253 IGKV2-29A2NJV5 120 aaPredicted RBP3.9□□□□□ -1.79
LRRC28-220ENST00000561253 APCSP02743 223 aa3.9□□□□□ -1.79
LRRC28-220ENST00000561253 KRTAP10-7P60409 375 aaPredicted RBP3.9□□□□□ -1.79
LRRC28-220ENST00000561253 C1orf134Q5TEV5 83 aa3.9□□□□□ -1.79
LRRC28-220ENST00000561253 CSDC2Q9Y534 153 aaKnown RBP3.9□□□□□ -1.79
LRRC28-220ENST00000561253 LRCOL1A6NCL2 159 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 TCAPO15273 167 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 FGF6P10767 208 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 PMCHP20382 165 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 RPL39P62891 51 aaKnown RBP3.89□□□□□ -1.79
LRRC28-220ENST00000561253 CXCL6P80162 114 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 FABP9Q0Z7S8 132 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 WFDC2Q14508 124 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 C2orf66Q6UXQ4 117 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 Q8N8P6 123 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 C18orf32Q8TCD1 76 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 TIMM21Q9BVV7 248 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 KLK12Q9UKR0 248 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 UBE2D4Q9Y2X8 147 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 VPS13BQ7Z7G8 4022 aa3.89□□□□□ -1.79
LRRC28-220ENST00000561253 A0A087WX48 190 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 A0A096LNJ9 63 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 F8WDY8 70 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 RAB5AP20339 215 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 IFI27P40305 119 aaPredicted RBP3.88□□□□□ -1.79
LRRC28-220ENST00000561253 PKIAP61925 76 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 LINC00336Q6ZUF6 198 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 ERASQ7Z444 233 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 LINC00269Q8N2A0 174 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.88□□□□□ -1.79
LRRC28-220ENST00000561253 KIR2DL4Q99706 377 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 MAP1LC3AQ9H492 121 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 NXT2Q9NPJ8 142 aaKnown RBP3.88□□□□□ -1.79
LRRC28-220ENST00000561253 CDC42SE2Q9NRR3 84 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 TRAPPC1Q9Y5R8 145 aa3.88□□□□□ -1.79
LRRC28-220ENST00000561253 TRAV8-3A0A0A6YYJ7 113 aa3.87□□□□□ -1.79
LRRC28-220ENST00000561253 LOC389332A0A1B0GUA5 103 aa3.87□□□□□ -1.79
LRRC28-220ENST00000561253 IGIPA6NJ69 53 aa3.87□□□□□ -1.79
LRRC28-220ENST00000561253 TMEM262E9PQX1 116 aa3.87□□□□□ -1.79
LRRC28-220ENST00000561253 K7EMI3 77 aa3.87□□□□□ -1.79
LRRC28-220ENST00000561253 ANGP03950 147 aaKnown RBP3.87□□□□□ -1.79
LRRC28-220ENST00000561253 TRGC2P03986 189 aa3.87□□□□□ -1.79
LRRC28-220ENST00000561253 ZNF25P17030 456 aaPredicted RBP3.87□□□□□ -1.79
LRRC28-220ENST00000561253 MRPS36P82909 103 aaKnown RBP3.87□□□□□ -1.79
LRRC28-220ENST00000561253 Q6ZUT4 128 aa3.87□□□□□ -1.79
LRRC28-220ENST00000561253 LINC00173Q6ZV60 143 aa3.87□□□□□ -1.79
LRRC28-220ENST00000561253 UBE2WQ96B02 151 aa3.87□□□□□ -1.79
LRRC28-220ENST00000561253 A0A087WTM6 91 aa3.86□□□□□ -1.79
LRRC28-220ENST00000561253 S100A1P23297 94 aa3.86□□□□□ -1.79
LRRC28-220ENST00000561253 FCER1GP30273 86 aa3.86□□□□□ -1.79
LRRC28-220ENST00000561253 REG3AQ06141 175 aa3.86□□□□□ -1.79
LRRC28-220ENST00000561253 Q0VG73 95 aa3.86□□□□□ -1.79
LRRC28-220ENST00000561253 MIAQ16674 131 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms