RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 STAB2Q8WWQ8 2551 aa0.6□□□□□ -2.31
USP8-211ENST00000560527 ABCA3Q99758 1704 aa0.6□□□□□ -2.31
USP8-211ENST00000560527 CSMD2Q7Z408 3487 aa0.6□□□□□ -2.31
USP8-211ENST00000560527 RIF1Q5UIP0 2472 aaKnown RBP0.6□□□□□ -2.31
USP8-211ENST00000560527 IFT140Q96RY7 1462 aa0.6□□□□□ -2.31
USP8-211ENST00000560527 TARBP1Q13395 1621 aaKnown RBP0.6□□□□□ -2.31
USP8-211ENST00000560527 LAMB1P07942 1786 aa0.6□□□□□ -2.31
USP8-211ENST00000560527 PSME4Q14997 1843 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 DOCK2Q92608 1830 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 SHPRHQ149N8 1683 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 NUP188Q5SRE5 1749 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 NRXN2Q9P2S2 1712 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 FAM186AA6NE01 2351 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 F8P00451 2351 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 TRAV13-2A0A0B4J235 113 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 TRBV10-3A0A0K0K1G6 114 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 C12orf73Q69YU5 71 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 CYP2G1PQ6ZSU1 146 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 C5orf38Q86SI9 138 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 C20orf197Q8N268 126 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 ACBD7Q8N6N7 88 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 TSLPQ969D9 159 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 DPH3P1Q9H4G8 78 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 LINC00474Q9P2X8 69 aa0.59□□□□□ -2.31
USP8-211ENST00000560527 ITPR2Q14571 2701 aa0.59□□□□□ -2.32
USP8-211ENST00000560527 TCHHQ07283 1943 aa0.59□□□□□ -2.32
USP8-211ENST00000560527 AKAP12Q02952 1782 aa0.59□□□□□ -2.32
USP8-211ENST00000560527 FANCAO15360 1455 aa0.59□□□□□ -2.32
USP8-211ENST00000560527 LRRC9Q6ZRR7 1453 aa0.59□□□□□ -2.32
USP8-211ENST00000560527 PHIPQ8WWQ0 1821 aa0.59□□□□□ -2.32
USP8-211ENST00000560527 ZC3H13Q5T200 1668 aaKnown RBP0.59□□□□□ -2.32
USP8-211ENST00000560527 ZFYVE16Q7Z3T8 1539 aa0.59□□□□□ -2.32
USP8-211ENST00000560527 PLXNA1Q9UIW2 1896 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 SPAG17Q6Q759 2223 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 SPHKAPQ2M3C7 1700 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 NWD2Q9ULI1 1742 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 CPSF1Q10570 1443 aaKnown RBP0.58□□□□□ -2.32
USP8-211ENST00000560527 PAPPAQ13219 1627 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 PIGBOS1A0A0B4J2F0 54 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 RBAKDNA6NC62 111 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 UBE2D1P51668 147 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 PKIAP61925 76 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 C10orf128Q5T292 105 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 TTC9CQ8N5M4 171 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 SPANXDQ9BXN6 97 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 KRTAP2-1Q9BYU5 128 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 LINC00312Q9Y6C7 94 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 MLH3Q9UHC1 1453 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 ZNF142P52746 1687 aaPredicted RBP0.58□□□□□ -2.32
USP8-211ENST00000560527 SONP18583 2426 aaKnown RBP0.58□□□□□ -2.32
USP8-211ENST00000560527 SVEP1Q4LDE5 3571 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 NIPBLQ6KC79 2804 aaeCLIP0.58□□□□□ -2.32
USP8-211ENST00000560527 DMXL2Q8TDJ6 3036 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 ABCA4P78363 2273 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 RGPD1P0DJD0 1748 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 COL7A1Q02388 2944 aa0.58□□□□□ -2.32
USP8-211ENST00000560527 FAT3Q8TDW7 4589 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 USP32Q8NFA0 1604 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 DAPK1P53355 1430 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 PPIP5K1Q6PFW1 1433 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 CASKIN1Q8WXD9 1431 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 DOCK11Q5JSL3 2073 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 TEX49A0A1B0GTD5 131 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 UBE2L5PA0A1B0GUS4 154 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 TMEM262E9PQX1 116 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 SIX6O95475 246 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 MT-ATP8P03928 68 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 ELOF1P60002 83 aaKnown RBP0.57□□□□□ -2.32
USP8-211ENST00000560527 GNG11P61952 73 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 UBE2L3P68036 154 aaKnown RBP0.57□□□□□ -2.32
USP8-211ENST00000560527 CCL8P80075 99 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 SSBP1Q04837 148 aaKnown RBP0.57□□□□□ -2.32
USP8-211ENST00000560527 C10orf99Q6UWK7 81 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 COMMD6Q7Z4G1 85 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 NDUFA11Q86Y39 141 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 C4orf33Q8N1A6 199 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 COX7B2Q8TF08 81 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 AQP10Q96PS8 301 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 SNHG12Q9BXW3 62 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 TNS1Q9HBL0 1735 aaKnown RBP0.57□□□□□ -2.32
USP8-211ENST00000560527 ASXL1Q8IXJ9 1541 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 ARHGEF12Q9NZN5 1544 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 KNTC1P50748 2209 aa0.57□□□□□ -2.32
USP8-211ENST00000560527 TANC1Q9C0D5 1861 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 VPS8Q8N3P4 1428 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 HIVEP1P15822 2718 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 LOC285556D6RIA3 1793 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 PAPPA2Q9BXP8 1791 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 URB2Q14146 1524 aaKnown RBP0.56□□□□□ -2.32
USP8-211ENST00000560527 A0A0D9SG42 100 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 hADV29S1A0JD25 119 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 CLPSL1A2RUU4 121 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 GNGT2O14610 69 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 SSSCA1O60232 199 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 CCL3L1P16619 93 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 DCDP81605 110 aaKnown RBP0.56□□□□□ -2.32
USP8-211ENST00000560527 KLKP1Q107X0 134 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 COL5A1-AS1Q5SY13 56 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 C6orf52Q5T4I8 152 aa0.56□□□□□ -2.32
USP8-211ENST00000560527 FAM74A4Q5TZK3 123 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms