RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 IBA57-AS1B1ANH7 110 aa9.1□□□□□ -0.95
SMAD3-214ENST00000560402 VCX2Q9H322 139 aa9.1□□□□□ -0.95
SMAD3-214ENST00000560402 DLEU1O43261 78 aa9.09□□□□□ -0.95
SMAD3-214ENST00000560402 NMUP48645 174 aa9.09□□□□□ -0.95
SMAD3-214ENST00000560402 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
SMAD3-214ENST00000560402 CTAG1AP78358 180 aa9.09□□□□□ -0.95
SMAD3-214ENST00000560402 LELP1Q5T871 98 aa9.09□□□□□ -0.95
SMAD3-214ENST00000560402 ZC2HC1BQ5TFG8 222 aa9.09□□□□□ -0.95
SMAD3-214ENST00000560402 Q6ZSN1 163 aa9.09□□□□□ -0.95
SMAD3-214ENST00000560402 SLC25A29Q8N8R3 303 aa9.09□□□□□ -0.95
SMAD3-214ENST00000560402 C2orf88Q9BSF0 95 aa9.09□□□□□ -0.95
SMAD3-214ENST00000560402 LRCOL1A6NCL2 159 aa9.08□□□□□ -0.96
SMAD3-214ENST00000560402 ANKRD39Q53RE8 183 aa9.08□□□□□ -0.96
SMAD3-214ENST00000560402 DGAT2L7PQ6IED9 249 aa9.08□□□□□ -0.96
SMAD3-214ENST00000560402 STPG4Q8N801 248 aa9.08□□□□□ -0.96
SMAD3-214ENST00000560402 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
SMAD3-214ENST00000560402 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
SMAD3-214ENST00000560402 Q8N814 137 aa9.07□□□□□ -0.96
SMAD3-214ENST00000560402 TIMM21Q9BVV7 248 aa9.07□□□□□ -0.96
SMAD3-214ENST00000560402 GTSF1LQ9H1H1 148 aa9.07□□□□□ -0.96
SMAD3-214ENST00000560402 CST9LQ9H4G1 147 aa9.07□□□□□ -0.96
SMAD3-214ENST00000560402 GAGE12JA6NER3 117 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 UBE2L6O14933 153 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 UBE2D3P61077 147 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 UBE2D2P62837 147 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 GAGE1Q13065 139 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 GAGE4Q13068 117 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 GAGE5Q13069 117 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 GAGE13Q4V321 117 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 ATP6V0E2Q8NHE4 81 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 TM2D2Q9BX73 214 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 Q9HAA7 133 aa9.06□□□□□ -0.96
SMAD3-214ENST00000560402 H7C423 109 aa9.05□□□□□ -0.96
SMAD3-214ENST00000560402 BOD1L2Q8IYS8 172 aa9.05□□□□□ -0.96
SMAD3-214ENST00000560402 IGLV4-3A0A075B6K6 122 aa9.04□□□□□ -0.96
SMAD3-214ENST00000560402 TRBV25-1A0A075B6N4 114 aa9.04□□□□□ -0.96
SMAD3-214ENST00000560402 BATFQ16520 125 aa9.04□□□□□ -0.96
SMAD3-214ENST00000560402 COL5A1-AS1Q5SY13 56 aa9.04□□□□□ -0.96
SMAD3-214ENST00000560402 DEFB104AQ8WTQ1 72 aa9.04□□□□□ -0.96
SMAD3-214ENST00000560402 TMEM101Q96IK0 257 aa9.04□□□□□ -0.96
SMAD3-214ENST00000560402 TMEM243Q9BU79 118 aa9.04□□□□□ -0.96
SMAD3-214ENST00000560402 CHCHD7Q9BUK0 85 aa9.04□□□□□ -0.96
SMAD3-214ENST00000560402 SNHG12Q9BXW3 62 aa9.04□□□□□ -0.96
SMAD3-214ENST00000560402 DNAH8Q96JB1 4490 aa9.04□□□□□ -0.96
SMAD3-214ENST00000560402 IGHV3-30P01768 117 aa9.03□□□□□ -0.96
SMAD3-214ENST00000560402 IGHV3-33P01772 117 aa9.03□□□□□ -0.96
SMAD3-214ENST00000560402 LINC00694P0DN24 101 aa9.03□□□□□ -0.96
SMAD3-214ENST00000560402 IGHV3-30-3P0DP02 117 aa9.03□□□□□ -0.96
SMAD3-214ENST00000560402 IGHV3-30-5P0DP03 117 aa9.03□□□□□ -0.96
SMAD3-214ENST00000560402 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
SMAD3-214ENST00000560402 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
SMAD3-214ENST00000560402 AMMECR1LQ6DCA0 310 aa9.03□□□□□ -0.96
SMAD3-214ENST00000560402 CHAC1Q9BUX1 264 aa9.03□□□□□ -0.96
SMAD3-214ENST00000560402 UBE2D4Q9Y2X8 147 aa9.03□□□□□ -0.96
SMAD3-214ENST00000560402 SRRM2Q9UQ35 2752 aaKnown RBP9.03□□□□□ -0.96
SMAD3-214ENST00000560402 TRAV8-3A0A0A6YYJ7 113 aa9.02□□□□□ -0.97
SMAD3-214ENST00000560402 C11orf86A6NJI1 115 aa9.02□□□□□ -0.97
SMAD3-214ENST00000560402 E9PLD3 99 aa9.02□□□□□ -0.97
SMAD3-214ENST00000560402 SMR3BP02814 79 aaPredicted RBP9.02□□□□□ -0.97
SMAD3-214ENST00000560402 SEC11AP67812 179 aa9.02□□□□□ -0.97
SMAD3-214ENST00000560402 HIGD1BQ9P298 99 aa9.02□□□□□ -0.97
SMAD3-214ENST00000560402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-214ENST00000560402 IGKV2-29A2NJV5 120 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-214ENST00000560402 FGF6P10767 208 aa9.01□□□□□ -0.97
SMAD3-214ENST00000560402 ZNF25P17030 456 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-214ENST00000560402 HSD52Q0P140 79 aa9.01□□□□□ -0.97
SMAD3-214ENST00000560402 OR5A1Q8NGJ0 315 aa9.01□□□□□ -0.97
SMAD3-214ENST00000560402 AMELXQ99217 191 aa9.01□□□□□ -0.97
SMAD3-214ENST00000560402 CSDC2Q9Y534 153 aaKnown RBP9.01□□□□□ -0.97
SMAD3-214ENST00000560402 COX11Q9Y6N1 276 aa9.01□□□□□ -0.97
SMAD3-214ENST00000560402 FLG2Q5D862 2391 aaPredicted RBP9.01□□□□□ -0.97
SMAD3-214ENST00000560402 IGLV4-69A0A075B6H9 119 aa9□□□□□ -0.97
SMAD3-214ENST00000560402 HINT1P49773 126 aaPredicted RBP9□□□□□ -0.97
SMAD3-214ENST00000560402 GEMIN7Q9H840 131 aaKnown RBP9□□□□□ -0.97
SMAD3-214ENST00000560402 H3BRM9 83 aa8.99□□□□□ -0.97
SMAD3-214ENST00000560402 HAMPP81172 84 aa8.99□□□□□ -0.97
SMAD3-214ENST00000560402 Q6ZSA8 131 aa8.99□□□□□ -0.97
SMAD3-214ENST00000560402 PCP2Q8IVA1 136 aa8.99□□□□□ -0.97
SMAD3-214ENST00000560402 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
SMAD3-214ENST00000560402 RMI2Q96E14 147 aa8.99□□□□□ -0.97
SMAD3-214ENST00000560402 Q9UF83 564 aa8.99□□□□□ -0.97
SMAD3-214ENST00000560402 IGKV2D-26A0A0A0MRZ7 120 aa8.98□□□□□ -0.97
SMAD3-214ENST00000560402 MYMXA0A1B0GTQ4 84 aa8.98□□□□□ -0.97
SMAD3-214ENST00000560402 TINCRA0A1B0GVN0 87 aa8.98□□□□□ -0.97
SMAD3-214ENST00000560402 A6NDN8 102 aa8.98□□□□□ -0.97
SMAD3-214ENST00000560402 LGALS3P17931 250 aaKnown RBP8.98□□□□□ -0.97
SMAD3-214ENST00000560402 OPRPNQ99935 248 aaPredicted RBP8.98□□□□□ -0.97
SMAD3-214ENST00000560402 TRBV6-8A0A0A6YYG3 113 aa8.97□□□□□ -0.97
SMAD3-214ENST00000560402 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
SMAD3-214ENST00000560402 TAL2Q16559 108 aa8.97□□□□□ -0.97
SMAD3-214ENST00000560402 MPV17L2Q567V2 206 aa8.97□□□□□ -0.97
SMAD3-214ENST00000560402 Q6ZUT4 128 aa8.97□□□□□ -0.97
SMAD3-214ENST00000560402 C2orf91Q6ZV80 131 aa8.97□□□□□ -0.97
SMAD3-214ENST00000560402 A0A0J9YXV3 536 aa8.96□□□□□ -0.98
SMAD3-214ENST00000560402 ZNF815PA8K554 130 aa8.96□□□□□ -0.98
SMAD3-214ENST00000560402 LEPROTO15243 131 aa8.96□□□□□ -0.98
SMAD3-214ENST00000560402 HERVK_113P63121 156 aa8.96□□□□□ -0.98
SMAD3-214ENST00000560402 WFDC2Q14508 124 aa8.96□□□□□ -0.98
SMAD3-214ENST00000560402 SCGB1D4Q6XE38 83 aa8.96□□□□□ -0.98
SMAD3-214ENST00000560402 CHCHD5Q9BSY4 110 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms