RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, human

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF9-208	ENST00000560311	FCER1G	P30273	86 aa		4.19	□□□□□ -1.74
IRF9-208	ENST00000560311	POLR2K	P53803	58 aa	Known RBP	4.19	□□□□□ -1.74
IRF9-208	ENST00000560311	FAM104B	Q5XKR9	115 aa		4.19	□□□□□ -1.74
IRF9-208	ENST00000560311	MRPL52	Q86TS9	123 aa	Known RBP	4.19	□□□□□ -1.74
IRF9-208	ENST00000560311	CIRBP-AS1	Q8TBR5	109 aa		4.19	□□□□□ -1.74
IRF9-208	ENST00000560311	BTF3L4	Q96K17	158 aa		4.19	□□□□□ -1.74
IRF9-208	ENST00000560311	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.18	□□□□□ -1.74
IRF9-208	ENST00000560311		D6R8Y8	96 aa		4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	VCY	O14598	125 aa		4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	S100A8	P05109	93 aa		4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	CKS2	P33552	79 aa		4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	XCL1	P47992	114 aa		4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	PNRC1	Q12796	327 aa	Predicted RBP	4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	FOXI1	Q12951	378 aa		4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	HIGD2B	Q4VC39	106 aa		4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	ATP5L2	Q7Z4Y8	100 aa		4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	C9orf163	Q8N9P6	203 aa		4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	KIR2DL4	Q99706	377 aa		4.18	□□□□□ -1.74
IRF9-208	ENST00000560311	IGHV3-64	A0A075B6Q5	118 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	LINC00959	A0A1B0GUT2	108 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	PANO1	I0J062	215 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	CCL25	O15444	150 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	NPY	P01303	97 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	LINC00614	P0C842	121 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	LBH	Q53QV2	105 aa	Predicted RBP	4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	RNASE13	Q5GAN3	156 aa	Known RBP	4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	CLLU1	Q5K131	121 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311		Q6ZUT4	128 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	ZNF664	Q8N3J9	261 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	C20orf78	Q9BR46	151 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	SMIM2	Q9BVW6	85 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	CDC42SE2	Q9NRR3	84 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	UBE2D4	Q9Y2X8	147 aa		4.17	□□□□□ -1.74
IRF9-208	ENST00000560311	TRBV24-1	A0A075B6N3	115 aa		4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	LINC00862	A6NCI5	91 aa		4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	ADCYAP1	P18509	176 aa		4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	MAL	P21145	153 aa		4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	KRTAP10-4	P60372	401 aa	Predicted RBP	4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	RPL32	P62910	135 aa	Known RBP	4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	SMAGP	Q0VAQ4	97 aa		4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	CIRBP	Q14011	172 aa	Known RBP	4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	ERAS	Q7Z444	233 aa		4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	SPACA4	Q8TDM5	124 aa		4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	C12orf57	Q99622	126 aa		4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	TNXB	P22105	4242 aa		4.16	□□□□□ -1.74
IRF9-208	ENST00000560311	IGHV1-58	A0A0C4DH39	117 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	PHOX2A	O14813	284 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	TCAP	O15273	167 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	PPBP	P02775	128 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	MT-ND4L	P03901	98 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	CHTF8	P0CG12	524 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	RPL37A	P61513	92 aa	Known RBP	4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	RPL39	P62891	51 aa	Known RBP	4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	SS18	Q15532	418 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	C5orf47	Q569G3	176 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	CD164L2	Q6UWJ8	174 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	SDIM1	Q6ZPB5	146 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	ORMDL3	Q8N138	153 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	TMEM18	Q96B42	140 aa		4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	CSDC2	Q9Y534	153 aa	Known RBP	4.15	□□□□□ -1.75
IRF9-208	ENST00000560311	TRAV13-1	A0A0B4J241	112 aa		4.14	□□□□□ -1.75
IRF9-208	ENST00000560311	COX7A2L	O14548	114 aa		4.14	□□□□□ -1.75
IRF9-208	ENST00000560311	SEC61G	P60059	68 aa		4.14	□□□□□ -1.75
IRF9-208	ENST00000560311	IFITM2	Q01629	132 aa		4.14	□□□□□ -1.75
IRF9-208	ENST00000560311	UQCC3	Q6UW78	93 aa		4.14	□□□□□ -1.75
IRF9-208	ENST00000560311	CARD19	Q96LW7	228 aa		4.14	□□□□□ -1.75
IRF9-208	ENST00000560311	PRELID3A	Q96N28	172 aa		4.14	□□□□□ -1.75
IRF9-208	ENST00000560311	TIMM21	Q9BVV7	248 aa		4.14	□□□□□ -1.75
IRF9-208	ENST00000560311	SPANXA1	Q9NS26	97 aa		4.14	□□□□□ -1.75
IRF9-208	ENST00000560311	SRRM2	Q9UQ35	2752 aa	Known RBP	4.14	□□□□□ -1.75
IRF9-208	ENST00000560311	IGKV2-24	A0A0C4DH68	120 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311		A0A0U1RRA0	63 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311		A0A1B0GV90	55 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	IFITM10	A6NMD0	228 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	C1orf196	B1AJZ1	125 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	S100P	P25815	95 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	COX6A2	Q02221	97 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	VAMP3	Q15836	100 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	TMEM136	Q6ZRR5	245 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	COMMD7	Q86VX2	200 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	BOD1L2	Q8IYS8	172 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	LINC00526	Q96FQ7	95 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	C2orf88	Q9BSF0	95 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	MAP1LC3A	Q9H492	121 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311	LAMTOR2	Q9Y2Q5	125 aa		4.13	□□□□□ -1.75
IRF9-208	ENST00000560311		A0A087WYN8	130 aa		4.12	□□□□□ -1.75
IRF9-208	ENST00000560311		A0A096LNI7	61 aa		4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	TMEM218	A2RU14	115 aa		4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	IFI27	P40305	119 aa	Predicted RBP	4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	HNRNPA3	P51991	378 aa	Known RBP	4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	HERV-K104	P63124	156 aa		4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	MRPS36	P82909	103 aa	Known RBP	4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	SPAG11B	Q08648	103 aa		4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	PRSS3P2	Q8NHM4	247 aa		4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	FAM104A	Q969W3	186 aa		4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	PLAC8	Q9NZF1	115 aa		4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	PKIG	Q9Y2B9	76 aa		4.12	□□□□□ -1.75
IRF9-208	ENST00000560311	IGLV4-69	A0A075B6H9	119 aa		4.11	□□□□□ -1.75
IRF9-208	ENST00000560311	IGLV4-3	A0A075B6K6	122 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms