RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 PDE6GP18545 87 aa2.89□□□□□ -1.95
HMGB3P26-201ENST00000560051 NREPQ16612 68 aa2.89□□□□□ -1.95
HMGB3P26-201ENST00000560051 LINC00483Q53H64 154 aa2.89□□□□□ -1.95
HMGB3P26-201ENST00000560051 LINC01558Q9Y6Z2 57 aa2.89□□□□□ -1.95
HMGB3P26-201ENST00000560051 R4GMQ9 66 aa2.89□□□□□ -1.95
HMGB3P26-201ENST00000560051 PRRC2AP48634 2157 aaKnown RBP2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 CR1P17927 2039 aa2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 A0A087WVE0 104 aa2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 LCE6AA0A183 80 aa2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 PRB4P10163 310 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 DEFA4P12838 97 aa2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 Q8N377 158 aa2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 Q8TAT8 98 aa2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 TMEM14CQ9P0S9 112 aa2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 LHFPL6Q9Y693 200 aa2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 CACNA1DQ01668 2161 aa2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 ARFGEF3Q5TH69 2177 aa2.88□□□□□ -1.95
HMGB3P26-201ENST00000560051 ESPL1Q14674 2120 aa2.87□□□□□ -1.95
HMGB3P26-201ENST00000560051 IGKV3D-11A0A0A0MRZ8 115 aa2.87□□□□□ -1.95
HMGB3P26-201ENST00000560051 C10orf142B7Z368 130 aa2.87□□□□□ -1.95
HMGB3P26-201ENST00000560051 IGLV1-47P01700 117 aa2.87□□□□□ -1.95
HMGB3P26-201ENST00000560051 COX6B1P14854 86 aa2.87□□□□□ -1.95
HMGB3P26-201ENST00000560051 LYPD1Q8N2G4 141 aa2.87□□□□□ -1.95
HMGB3P26-201ENST00000560051 MRPL36Q9P0J6 103 aaKnown RBP2.87□□□□□ -1.95
HMGB3P26-201ENST00000560051 DOT1LQ8TEK3 1739 aa2.87□□□□□ -1.95
HMGB3P26-201ENST00000560051 A0A096LNJ9 63 aa2.86□□□□□ -1.95
HMGB3P26-201ENST00000560051 A0A1B0GU33 70 aa2.86□□□□□ -1.95
HMGB3P26-201ENST00000560051 A0A1B0GUV1 79 aa2.86□□□□□ -1.95
HMGB3P26-201ENST00000560051 NUPR2A6NF83 97 aa2.86□□□□□ -1.95
HMGB3P26-201ENST00000560051 PDE6HQ13956 83 aa2.86□□□□□ -1.95
HMGB3P26-201ENST00000560051 DEFB114Q30KQ6 69 aa2.86□□□□□ -1.95
HMGB3P26-201ENST00000560051 DEFB113Q30KQ7 82 aa2.86□□□□□ -1.95
HMGB3P26-201ENST00000560051 LYPD6Q86Y78 171 aa2.86□□□□□ -1.95
HMGB3P26-201ENST00000560051 COX7B2Q8TF08 81 aa2.86□□□□□ -1.95
HMGB3P26-201ENST00000560051 LINC00167Q96N53 147 aa2.86□□□□□ -1.95
HMGB3P26-201ENST00000560051 TRBV6-6A0A0A6YYG2 114 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 UQCR11O14957 56 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 PIN1P1O15428 100 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 MGPP08493 103 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 CSAG1Q6PB30 78 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 ENHOQ6UWT2 76 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 Q8NAQ8 132 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 RNF5Q99942 180 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 HIGD2AQ9BW72 106 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 PRR34Q9NV39 138 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 PLAC8Q9NZF1 115 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 C4AP0C0L4 1744 aa2.85□□□□□ -1.95
HMGB3P26-201ENST00000560051 NUP214P35658 2090 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P26-201ENST00000560051 TRAV40A0A0B4J280 105 aa2.84□□□□□ -1.95
HMGB3P26-201ENST00000560051 TRBV6-1A0A0K0K1D8 114 aa2.84□□□□□ -1.95
HMGB3P26-201ENST00000560051 CLPSL1A2RUU4 121 aa2.84□□□□□ -1.95
HMGB3P26-201ENST00000560051 IGIPA6NJ69 53 aa2.84□□□□□ -1.95
HMGB3P26-201ENST00000560051 GAS8-AS1O95177 125 aa2.84□□□□□ -1.95
HMGB3P26-201ENST00000560051 GIG44P09565 113 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P26-201ENST00000560051 KRTAP25-1Q3LHN0 102 aa2.84□□□□□ -1.95
HMGB3P26-201ENST00000560051 LINC00208Q96KT6 92 aa2.84□□□□□ -1.95
HMGB3P26-201ENST00000560051 LITAFQ99732 161 aa2.84□□□□□ -1.95
HMGB3P26-201ENST00000560051 C4BP0C0L5 1744 aa2.84□□□□□ -1.96
HMGB3P26-201ENST00000560051 CUL9Q8IWT3 2517 aa2.84□□□□□ -1.96
HMGB3P26-201ENST00000560051 DOCK10Q96BY6 2186 aa2.84□□□□□ -1.96
HMGB3P26-201ENST00000560051 TNCP24821 2201 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 IGLV2-18A0A075B6J9 118 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 A8MU10 97 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 H0YGX0 51 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 IGKV3-20P01619 116 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 TFF1P04155 84 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 CTSGP08311 255 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 P0C880 135 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 HIGD2BQ4VC39 106 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 MINOS1-NBL1R4GNA1 71 aa2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 TNRC6BQ9UPQ9 1833 aaKnown RBP2.83□□□□□ -1.96
HMGB3P26-201ENST00000560051 TRAV21A0A0B4J279 112 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 A0A1W2PPR1 153 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 H0Y9P7 68 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 I3L3M4 83 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 M0R135 149 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 SPINK4O60575 86 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 IGKV1-17P01599 117 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 CISD3P0C7P0 127 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 C9orf129Q5T035 196 aaKnown RBP2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 Q5W150 140 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 ST20-AS1Q8NBB2 130 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 COL4A1P02462 1669 aa2.82□□□□□ -1.96
HMGB3P26-201ENST00000560051 FREM1Q5H8C1 2179 aa2.81□□□□□ -1.96
HMGB3P26-201ENST00000560051 ABCA4P78363 2273 aa2.81□□□□□ -1.96
HMGB3P26-201ENST00000560051 M0R3E3 92 aa2.81□□□□□ -1.96
HMGB3P26-201ENST00000560051 IL9P15248 144 aa2.81□□□□□ -1.96
HMGB3P26-201ENST00000560051 CCL3L1P16619 93 aa2.81□□□□□ -1.96
HMGB3P26-201ENST00000560051 CCL18P55774 89 aa2.81□□□□□ -1.96
HMGB3P26-201ENST00000560051 ZCCHC13Q8WW36 166 aaKnown RBP2.81□□□□□ -1.96
HMGB3P26-201ENST00000560051 PSORS1C2Q9UIG4 136 aa2.81□□□□□ -1.96
HMGB3P26-201ENST00000560051 RP1P56715 2156 aa2.81□□□□□ -1.96
HMGB3P26-201ENST00000560051 ZFHX3Q15911 3703 aa2.8□□□□□ -1.96
HMGB3P26-201ENST00000560051 PLXNB2O15031 1838 aa2.8□□□□□ -1.96
HMGB3P26-201ENST00000560051 COL5A1P20908 1838 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P26-201ENST00000560051 NRXN2Q9P2S2 1712 aa2.8□□□□□ -1.96
HMGB3P26-201ENST00000560051 M0R1W7 72 aa2.8□□□□□ -1.96
HMGB3P26-201ENST00000560051 HCP5Q6MZN7 132 aa2.8□□□□□ -1.96
HMGB3P26-201ENST00000560051 KIF26BQ2KJY2 2108 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms