RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 PMCHL1Q16048 86 aa11.16□□□□□ -0.62
PSEN1-224ENST00000559361 CLPSL2Q6UWE3 100 aa11.16□□□□□ -0.62
PSEN1-224ENST00000559361 AMELXQ99217 191 aa11.16□□□□□ -0.62
PSEN1-224ENST00000559361 LINC00959A0A1B0GUT2 108 aa11.15□□□□□ -0.62
PSEN1-224ENST00000559361 IFITM10A6NMD0 228 aa11.15□□□□□ -0.62
PSEN1-224ENST00000559361 SMR3BP02814 79 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-224ENST00000559361 FAM104AQ969W3 186 aa11.15□□□□□ -0.62
PSEN1-224ENST00000559361 HSPB8Q9UJY1 196 aa11.15□□□□□ -0.62
PSEN1-224ENST00000559361 IGKV2D-24A0A075B6R9 120 aa11.14□□□□□ -0.63
PSEN1-224ENST00000559361 LEPROTL1O95214 131 aa11.14□□□□□ -0.63
PSEN1-224ENST00000559361 NDUFA6P56556 154 aa11.14□□□□□ -0.63
PSEN1-224ENST00000559361 A0A087WTM6 91 aa11.13□□□□□ -0.63
PSEN1-224ENST00000559361 PSCAO43653 123 aa11.13□□□□□ -0.63
PSEN1-224ENST00000559361 S100A6P06703 90 aa11.13□□□□□ -0.63
PSEN1-224ENST00000559361 SEC11AP67812 179 aa11.13□□□□□ -0.63
PSEN1-224ENST00000559361 FAM19A2Q8N3H0 131 aa11.13□□□□□ -0.63
PSEN1-224ENST00000559361 OPRPNQ99935 248 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-224ENST00000559361 DNAH8Q96JB1 4490 aa11.12□□□□□ -0.63
PSEN1-224ENST00000559361 TRAV13-1A0A0B4J241 112 aa11.12□□□□□ -0.63
PSEN1-224ENST00000559361 IGKV3OR2-268A0A0C4DH90 116 aa11.12□□□□□ -0.63
PSEN1-224ENST00000559361 PMVKQ15126 192 aa11.12□□□□□ -0.63
PSEN1-224ENST00000559361 RNASE13Q5GAN3 156 aaKnown RBP11.12□□□□□ -0.63
PSEN1-224ENST00000559361 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
PSEN1-224ENST00000559361 FAM229AH3BQW9 127 aa11.11□□□□□ -0.63
PSEN1-224ENST00000559361 NUPR1O60356 82 aa11.11□□□□□ -0.63
PSEN1-224ENST00000559361 LINC00173Q6ZV60 143 aa11.11□□□□□ -0.63
PSEN1-224ENST00000559361 CHCHD10Q8WYQ3 142 aaPredicted RBP11.11□□□□□ -0.63
PSEN1-224ENST00000559361 IFI27L1Q96BM0 104 aa11.11□□□□□ -0.63
PSEN1-224ENST00000559361 J3QL48 77 aa11.1□□□□□ -0.63
PSEN1-224ENST00000559361 UBE2D1P51668 147 aa11.1□□□□□ -0.63
PSEN1-224ENST00000559361 CD164L2Q6UWJ8 174 aa11.1□□□□□ -0.63
PSEN1-224ENST00000559361 FAM19A3Q7Z5A8 133 aa11.1□□□□□ -0.63
PSEN1-224ENST00000559361 CST9LQ9H4G1 147 aa11.1□□□□□ -0.63
PSEN1-224ENST00000559361 UBR4Q5T4S7 5183 aa11.09□□□□□ -0.63
PSEN1-224ENST00000559361 IGLV10-54A0A075B6I4 117 aa11.09□□□□□ -0.63
PSEN1-224ENST00000559361 TRAV12-1A0A0B4J245 112 aa11.09□□□□□ -0.63
PSEN1-224ENST00000559361 PRSS1P07477 247 aa11.08□□□□□ -0.64
PSEN1-224ENST00000559361 GCSHP23434 173 aa11.08□□□□□ -0.64
PSEN1-224ENST00000559361 XCL1P47992 114 aa11.08□□□□□ -0.64
PSEN1-224ENST00000559361 KRTAP26-1Q6PEX3 210 aa11.08□□□□□ -0.64
PSEN1-224ENST00000559361 HERVK_113P63121 156 aa11.07□□□□□ -0.64
PSEN1-224ENST00000559361 MAP1LC3CQ9BXW4 147 aa11.07□□□□□ -0.64
PSEN1-224ENST00000559361 GAGE12HA6NDE8 117 aa11.06□□□□□ -0.64
PSEN1-224ENST00000559361 FOXI1Q12951 378 aa11.06□□□□□ -0.64
PSEN1-224ENST00000559361 LINC00242Q5T6M2 205 aa11.06□□□□□ -0.64
PSEN1-224ENST00000559361 CFAP161Q6P656 301 aa11.06□□□□□ -0.64
PSEN1-224ENST00000559361 HMCN2Q8NDA2 5059 aa11.05□□□□□ -0.64
PSEN1-224ENST00000559361 TINCRA0A1B0GVN0 87 aa11.05□□□□□ -0.64
PSEN1-224ENST00000559361 KRTAP29-1A8MX34 341 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-224ENST00000559361 COX7A2LO14548 114 aa11.05□□□□□ -0.64
PSEN1-224ENST00000559361 FABP4P15090 132 aa11.05□□□□□ -0.64
PSEN1-224ENST00000559361 S100A2P29034 98 aa11.05□□□□□ -0.64
PSEN1-224ENST00000559361 C14orf177Q52M58 125 aa11.05□□□□□ -0.64
PSEN1-224ENST00000559361 GEMIN7Q9H840 131 aaKnown RBP11.05□□□□□ -0.64
PSEN1-224ENST00000559361 IGHV3OR16-9A0A0B4J2B5 98 aa11.04□□□□□ -0.64
PSEN1-224ENST00000559361 HAMPP81172 84 aa11.04□□□□□ -0.64
PSEN1-224ENST00000559361 LINC01561Q8N1V8 128 aa11.04□□□□□ -0.64
PSEN1-224ENST00000559361 HIST3H2BBQ8N257 126 aa11.04□□□□□ -0.64
PSEN1-224ENST00000559361 APOMO95445 188 aa11.03□□□□□ -0.64
PSEN1-224ENST00000559361 ZC2HC1BQ5TFG8 222 aa11.03□□□□□ -0.64
PSEN1-224ENST00000559361 LRP1Q07954 4544 aaKnown RBP11.02□□□□□ -0.64
PSEN1-224ENST00000559361 IGLC3P0DOY3 106 aa11.02□□□□□ -0.65
PSEN1-224ENST00000559361 MALP21145 153 aa11.02□□□□□ -0.65
PSEN1-224ENST00000559361 CHTOPQ9Y3Y2 248 aaKnown RBP11.02□□□□□ -0.65
PSEN1-224ENST00000559361 IGLV5-45A0A087WSX0 123 aa11.01□□□□□ -0.65
PSEN1-224ENST00000559361 A0A087WZ39 114 aa11.01□□□□□ -0.65
PSEN1-224ENST00000559361 LRCOL1A6NCL2 159 aa11.01□□□□□ -0.65
PSEN1-224ENST00000559361 C5orf52A6NGY3 159 aa11.01□□□□□ -0.65
PSEN1-224ENST00000559361 F8VRH5 84 aa11.01□□□□□ -0.65
PSEN1-224ENST00000559361 IGHV1-58A0A0C4DH39 117 aa11□□□□□ -0.65
PSEN1-224ENST00000559361 A0A0J9YXV3 536 aa11□□□□□ -0.65
PSEN1-224ENST00000559361 SYS1-DBNDD2H3BUS1 97 aa11□□□□□ -0.65
PSEN1-224ENST00000559361 PLNP26678 52 aa11□□□□□ -0.65
PSEN1-224ENST00000559361 SNRPEP62304 92 aaKnown RBP11□□□□□ -0.65
PSEN1-224ENST00000559361 SERTAD4-AS1Q5TG53 156 aa11□□□□□ -0.65
PSEN1-224ENST00000559361 CHAC1Q9BUX1 264 aa11□□□□□ -0.65
PSEN1-224ENST00000559361 IGLV4-69A0A075B6H9 119 aa10.99□□□□□ -0.65
PSEN1-224ENST00000559361 USP17L23D6RBM5 183 aa10.99□□□□□ -0.65
PSEN1-224ENST00000559361 H3BRM9 83 aa10.99□□□□□ -0.65
PSEN1-224ENST00000559361 AKR1D1P51857 326 aa10.99□□□□□ -0.65
PSEN1-224ENST00000559361 ODF1Q14990 250 aa10.99□□□□□ -0.65
PSEN1-224ENST00000559361 PET117Q6UWS5 81 aa10.99□□□□□ -0.65
PSEN1-224ENST00000559361 LINC00469Q8N7U9 141 aa10.99□□□□□ -0.65
PSEN1-224ENST00000559361 HIST1H2BLQ99880 126 aa10.99□□□□□ -0.65
PSEN1-224ENST00000559361 COX6A2Q02221 97 aa10.98□□□□□ -0.65
PSEN1-224ENST00000559361 OR10D4PQ8NGN7 298 aa10.98□□□□□ -0.65
PSEN1-224ENST00000559361 NTN5Q8WTR8 489 aaPredicted RBP10.98□□□□□ -0.65
PSEN1-224ENST00000559361 FAM30AQ9NZY2 134 aa10.98□□□□□ -0.65
PSEN1-224ENST00000559361 GVQW2A0A096LPI5 108 aaPredicted RBP10.97□□□□□ -0.65
PSEN1-224ENST00000559361 H0Y8G0 127 aa10.97□□□□□ -0.65
PSEN1-224ENST00000559361 C5orf38Q86SI9 138 aa10.97□□□□□ -0.65
PSEN1-224ENST00000559361 Q8N814 137 aa10.97□□□□□ -0.65
PSEN1-224ENST00000559361 MRPL35Q9NZE8 188 aaKnown RBP10.97□□□□□ -0.65
PSEN1-224ENST00000559361 CDKN2A-AS1Q9UH64 79 aa10.97□□□□□ -0.65
PSEN1-224ENST00000559361 IGLV5-52A0A0A0MRZ9 124 aa10.96□□□□□ -0.65
PSEN1-224ENST00000559361 C20orf202A1L168 122 aa10.96□□□□□ -0.65
PSEN1-224ENST00000559361 C15orf56Q8N910 161 aa10.96□□□□□ -0.65
PSEN1-224ENST00000559361 IGHV3-64A0A075B6Q5 118 aa10.95□□□□□ -0.66
PSEN1-224ENST00000559361 F8WDY8 70 aa10.95□□□□□ -0.66
PSEN1-224ENST00000559361 DPM2O94777 84 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms