RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 C10orf91Q5T1B1 145 aa2.82□□□□□ -1.96
SNX1-205ENST00000559339 C2orf66Q6UXQ4 117 aa2.82□□□□□ -1.96
SNX1-205ENST00000559339 TEX43Q6ZNM6 134 aa2.82□□□□□ -1.96
SNX1-205ENST00000559339 Q6ZUT4 128 aa2.82□□□□□ -1.96
SNX1-205ENST00000559339 C15orf56Q8N910 161 aa2.82□□□□□ -1.96
SNX1-205ENST00000559339 TMEM141Q96I45 108 aa2.82□□□□□ -1.96
SNX1-205ENST00000559339 CARD19Q96LW7 228 aa2.82□□□□□ -1.96
SNX1-205ENST00000559339 CAMK2N2Q96S95 79 aa2.82□□□□□ -1.96
SNX1-205ENST00000559339 VCX2Q9H322 139 aa2.82□□□□□ -1.96
SNX1-205ENST00000559339 CARHSP1Q9Y2V2 147 aaKnown RBP2.82□□□□□ -1.96
SNX1-205ENST00000559339 PCLOQ9Y6V0 5065 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 IGLV4-69A0A075B6H9 119 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 SLPIP03973 132 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 SEC11AP67812 179 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 SYCNQ0VAF6 134 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 FABP9Q0Z7S8 132 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 KIAA1644Q3SXP7 199 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 C5orf38Q86SI9 138 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 OR10D4PQ8NGN7 298 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 C7orf33Q8WU49 177 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 OPRPNQ99935 248 aaPredicted RBP2.81□□□□□ -1.96
SNX1-205ENST00000559339 SMCO4Q9NRQ5 59 aa2.81□□□□□ -1.96
SNX1-205ENST00000559339 TMA7Q9Y2S6 64 aaKnown RBP2.81□□□□□ -1.96
SNX1-205ENST00000559339 IGLV4-3A0A075B6K6 122 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 A0A087WYN8 130 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 A0A087WZ39 114 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 IGHV3OR16-9A0A0B4J2B5 98 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 IGKV2-24A0A0C4DH68 120 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 F8WDY8 70 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 PRSS2P07478 247 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 RPL37AP61513 92 aaKnown RBP2.8□□□□□ -1.96
SNX1-205ENST00000559339 SPAG11BQ08648 103 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 CIRBPQ14011 172 aaKnown RBP2.8□□□□□ -1.96
SNX1-205ENST00000559339 MAJINQ3KP22 176 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 FA2HQ7L5A8 372 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 ERASQ7Z444 233 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 SPACA4Q8TDM5 124 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 C2orf48Q96LS8 159 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 PACRGQ96M98 296 aaPredicted RBP2.8□□□□□ -1.96
SNX1-205ENST00000559339 SCGB3A1Q96QR1 104 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 TIMM17AQ99595 171 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 KRTAP17-1Q9BYP8 105 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 GEMIN7Q9H840 131 aaKnown RBP2.8□□□□□ -1.96
SNX1-205ENST00000559339 TRAPPC1Q9Y5R8 145 aa2.8□□□□□ -1.96
SNX1-205ENST00000559339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.8□□□□□ -1.96
SNX1-205ENST00000559339 DNAH11Q96DT5 4516 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 LOC107984640A0A0U1RRK4 108 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 IGIPA6NJ69 53 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 NDUFA1O15239 70 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 CHTF8P0CG12 524 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 RAB5BP61020 215 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 CKS1BP61024 79 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 HERVK_113P63121 156 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 GAGE2BQ13066 116 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 RNF151Q2KHN1 245 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 LINC00242Q5T6M2 205 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 STPG4Q8N801 248 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 ORAOV1Q8WV07 137 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 TOMM6Q96B49 74 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 LINC00526Q96FQ7 95 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 AMELXQ99217 191 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 ALKBH7Q9BT30 221 aaPredicted RBP2.79□□□□□ -1.96
SNX1-205ENST00000559339 HSPG2P98160 4391 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 LRP1BQ9NZR2 4599 aa2.79□□□□□ -1.96
SNX1-205ENST00000559339 A0A096LNI7 61 aa2.78□□□□□ -1.96
SNX1-205ENST00000559339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.78□□□□□ -1.96
SNX1-205ENST00000559339 LINC00614P0C842 121 aa2.78□□□□□ -1.96
SNX1-205ENST00000559339 UBE2D1P51668 147 aa2.78□□□□□ -1.96
SNX1-205ENST00000559339 PTTG1IPP53801 180 aa2.78□□□□□ -1.96
SNX1-205ENST00000559339 RPL18AQ02543 176 aaKnown RBP2.78□□□□□ -1.96
SNX1-205ENST00000559339 C6orf226Q5I0X4 101 aa2.78□□□□□ -1.96
SNX1-205ENST00000559339 Q6ZRU5 148 aa2.78□□□□□ -1.96
SNX1-205ENST00000559339 LINC01561Q8N1V8 128 aa2.78□□□□□ -1.96
SNX1-205ENST00000559339 FAM104AQ969W3 186 aa2.78□□□□□ -1.96
SNX1-205ENST00000559339 MRPL35Q9NZE8 188 aaKnown RBP2.78□□□□□ -1.96
SNX1-205ENST00000559339 PLAC8Q9NZF1 115 aa2.78□□□□□ -1.96
SNX1-205ENST00000559339 SRRM2Q9UQ35 2752 aaKnown RBP2.78□□□□□ -1.97
SNX1-205ENST00000559339 TRBV30A0A0K0K1B3 111 aa2.77□□□□□ -1.97
SNX1-205ENST00000559339 LINC01546A6NGU7 62 aa2.77□□□□□ -1.97
SNX1-205ENST00000559339 H3BRM9 83 aa2.77□□□□□ -1.97
SNX1-205ENST00000559339 PANO1I0J062 215 aa2.77□□□□□ -1.97
SNX1-205ENST00000559339 NDUFA6P56556 154 aa2.77□□□□□ -1.97
SNX1-205ENST00000559339 PMVKQ15126 192 aa2.77□□□□□ -1.97
SNX1-205ENST00000559339 FAM19A3Q7Z5A8 133 aa2.77□□□□□ -1.97
SNX1-205ENST00000559339 LINC00469Q8N7U9 141 aa2.77□□□□□ -1.97
SNX1-205ENST00000559339 TOMM7Q9P0U1 55 aa2.77□□□□□ -1.97
SNX1-205ENST00000559339 HERC2O95714 4834 aa2.77□□□□□ -1.97
SNX1-205ENST00000559339 FLG2Q5D862 2391 aaPredicted RBP2.76□□□□□ -1.97
SNX1-205ENST00000559339 DMBT1Q9UGM3 2413 aaPredicted RBP2.76□□□□□ -1.97
SNX1-205ENST00000559339 A0A0J9YXV3 536 aa2.76□□□□□ -1.97
SNX1-205ENST00000559339 TINCRA0A1B0GVN0 87 aa2.76□□□□□ -1.97
SNX1-205ENST00000559339 NDUFC2-KCTD14E9PQ53 114 aa2.76□□□□□ -1.97
SNX1-205ENST00000559339 ATP5LO75964 103 aa2.76□□□□□ -1.97
SNX1-205ENST00000559339 HBDP02042 147 aa2.76□□□□□ -1.97
SNX1-205ENST00000559339 TLX1NBP0CAT3 122 aa2.76□□□□□ -1.97
SNX1-205ENST00000559339 CXCL5P42830 114 aa2.76□□□□□ -1.97
SNX1-205ENST00000559339 GAGE2EQ4V326 116 aa2.76□□□□□ -1.97
SNX1-205ENST00000559339 ZC2HC1BQ5TFG8 222 aa2.76□□□□□ -1.97
SNX1-205ENST00000559339 UNQ6190/PRO20217Q6UXQ8 127 aa2.76□□□□□ -1.97
SNX1-205ENST00000559339 Q6ZRP5 223 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms